RNA–Protein interactions for RNA: ENST00000473377.5

CGN-206, Transcript of cingulin, humanhuman

TSL 1 (best)

Gene CGN, Length 2,956 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGN-206ENST00000473377 NISCHQ9Y2I1 1504 aa20■□□□□ 0.79
CGN-206ENST00000473377 CCDC180Q9P1Z9 1646 aa17.12■□□□□ 0.33
CGN-206ENST00000473377 SHROOM4Q9ULL8 1493 aa16.92■□□□□ 0.3
CGN-206ENST00000473377 ZCCHC6Q5VYS8 1495 aaKnown RBP16.84■□□□□ 0.29
CGN-206ENST00000473377 DCAF8L2P0C7V8 631 aa16.83■□□□□ 0.28
CGN-206ENST00000473377 SUPT5HO00267 1087 aaKnown RBP16.38■□□□□ 0.21
CGN-206ENST00000473377 ABCC9O60706 1549 aa16.34■□□□□ 0.21
CGN-206ENST00000473377 DCAF1Q9Y4B6 1507 aa16.34■□□□□ 0.21
CGN-206ENST00000473377 SCRIBQ14160 1630 aa16.1■□□□□ 0.17
CGN-206ENST00000473377 MYO15BQ96JP2 1530 aa15.98■□□□□ 0.15
CGN-206ENST00000473377 NACADO15069 1562 aa15.93■□□□□ 0.14
CGN-206ENST00000473377 RB1CC1Q8TDY2 1594 aa15.78■□□□□ 0.12
CGN-206ENST00000473377 RSF1Q96T23 1441 aaPredicted RBP15.71■□□□□ 0.11
CGN-206ENST00000473377 CECR2Q9BXF3 1484 aa15.7■□□□□ 0.1
CGN-206ENST00000473377 CHIC1Q5VXU3 224 aa15.69■□□□□ 0.1
CGN-206ENST00000473377 PABPN1Q86U42 306 aaKnown RBP eCLIP15.58■□□□□ 0.08
CGN-206ENST00000473377 MROH2BQ7Z745 1585 aa15.58■□□□□ 0.08
CGN-206ENST00000473377 UNC13AQ9UPW8 1703 aa15.57■□□□□ 0.08
CGN-206ENST00000473377 WIZO95785 1651 aa15.47■□□□□ 0.07
CGN-206ENST00000473377 AEBP2Q6ZN18 517 aaPredicted RBP15.45■□□□□ 0.06
CGN-206ENST00000473377 BICRAQ9NZM4 1560 aa15.4■□□□□ 0.06
CGN-206ENST00000473377 BAZ1AQ9NRL2 1556 aaPredicted RBP15.37■□□□□ 0.05
CGN-206ENST00000473377 SMARCA4P51532 1647 aa15.31■□□□□ 0.04
CGN-206ENST00000473377 LOC105371045A0A1W2PR82 267 aa15.27■□□□□ 0.04
CGN-206ENST00000473377 TRIM41Q8WV44 630 aa15.23■□□□□ 0.03
CGN-206ENST00000473377 FAM9AQ8IZU1 332 aaPredicted RBP15.18■□□□□ 0.02
CGN-206ENST00000473377 TOP2AP11388 1531 aaKnown RBP15.17■□□□□ 0.02
CGN-206ENST00000473377 CCDC88BA6NC98 1476 aa15.14■□□□□ 0.01
CGN-206ENST00000473377 EHMT2Q96KQ7 1210 aa15.13■□□□□ 0.01
CGN-206ENST00000473377 SMARCA2P51531 1590 aa15.1■□□□□ 0.01
CGN-206ENST00000473377 EIF4G1Q04637 1599 aaKnown RBP15.05■□□□□ -0
CGN-206ENST00000473377 ATAD2BQ9ULI0 1458 aa15.03■□□□□ -0
CGN-206ENST00000473377 ABCC8Q09428 1581 aa15.02□□□□□ -0.01
CGN-206ENST00000473377 PEG3Q9GZU2 1588 aa14.99□□□□□ -0.01
CGN-206ENST00000473377 BAZ1BQ9UIG0 1483 aaKnown RBP14.97□□□□□ -0.01
CGN-206ENST00000473377 PCGF6Q9BYE7 350 aa14.84□□□□□ -0.03
CGN-206ENST00000473377 SOGA1O94964 1423 aa14.8□□□□□ -0.04
CGN-206ENST00000473377 NCAPD3P42695 1498 aa14.77□□□□□ -0.04
CGN-206ENST00000473377 RUSC2Q8N2Y8 1516 aa14.76□□□□□ -0.05
CGN-206ENST00000473377 WRNQ14191 1432 aaPredicted RBP eCLIP14.76□□□□□ -0.05
CGN-206ENST00000473377 SYNJ1O43426 1573 aa14.73□□□□□ -0.05
CGN-206ENST00000473377 HMGXB3Q12766 1538 aa14.72□□□□□ -0.05
CGN-206ENST00000473377 PPARGC1BQ86YN6 1023 aaKnown RBP14.67□□□□□ -0.06
CGN-206ENST00000473377 CC2D2AQ9P2K1 1620 aa14.65□□□□□ -0.06
CGN-206ENST00000473377 CSRNP3Q8WYN3 585 aa14.63□□□□□ -0.07
CGN-206ENST00000473377 UBTFP17480 764 aaKnown RBP14.58□□□□□ -0.08
CGN-206ENST00000473377 CFTRP13569 1480 aa14.56□□□□□ -0.08
CGN-206ENST00000473377 TRIM26Q12899 539 aaPredicted RBP14.56□□□□□ -0.08
CGN-206ENST00000473377 DNAJC5BQ9UF47 199 aa14.54□□□□□ -0.08
CGN-206ENST00000473377 TTBK1Q5TCY1 1321 aaPredicted RBP14.52□□□□□ -0.08
CGN-206ENST00000473377 TOP2BQ02880 1626 aa14.52□□□□□ -0.08
CGN-206ENST00000473377 CUX1P39880 1505 aa14.52□□□□□ -0.09
CGN-206ENST00000473377 EEA1Q15075 1411 aa14.52□□□□□ -0.09
CGN-206ENST00000473377 CEP162Q5TB80 1403 aa14.51□□□□□ -0.09
CGN-206ENST00000473377 HRCP23327 699 aa14.5□□□□□ -0.09
CGN-206ENST00000473377 RANGAP1P46060 587 aaPredicted RBP14.5□□□□□ -0.09
CGN-206ENST00000473377 CADPSQ9ULU8 1353 aa14.49□□□□□ -0.09
CGN-206ENST00000473377 TNIKQ9UKE5 1360 aa14.47□□□□□ -0.09
CGN-206ENST00000473377 GOLGA3Q08378 1498 aa14.47□□□□□ -0.09
CGN-206ENST00000473377 BIVM-ERCC5R4GMW8 1640 aa14.46□□□□□ -0.09
CGN-206ENST00000473377 NESP48681 1621 aa14.45□□□□□ -0.1
CGN-206ENST00000473377 RAPGEF2Q9Y4G8 1499 aa14.44□□□□□ -0.1
CGN-206ENST00000473377 CEP164Q9UPV0 1460 aa14.42□□□□□ -0.1
CGN-206ENST00000473377 KIF21BO75037 1637 aa14.38□□□□□ -0.11
CGN-206ENST00000473377 PRDM2Q13029 1718 aa14.36□□□□□ -0.11
CGN-206ENST00000473377 FANCD2Q9BXW9 1451 aa14.36□□□□□ -0.11
CGN-206ENST00000473377 FGD5Q6ZNL6 1462 aa14.32□□□□□ -0.12
CGN-206ENST00000473377 CLIP1P30622 1438 aa14.32□□□□□ -0.12
CGN-206ENST00000473377 KIF27Q86VH2 1401 aa14.32□□□□□ -0.12
CGN-206ENST00000473377 CUX2O14529 1486 aa14.31□□□□□ -0.12
CGN-206ENST00000473377 PRXQ9BXM0 1461 aa14.29□□□□□ -0.12
CGN-206ENST00000473377 RAD54L2Q9Y4B4 1467 aa14.26□□□□□ -0.13
CGN-206ENST00000473377 IGF1RP08069 1367 aa14.23□□□□□ -0.13
CGN-206ENST00000473377 TOPBP1Q92547 1522 aa14.22□□□□□ -0.13
CGN-206ENST00000473377 ERICH3Q5RHP9 1530 aa14.2□□□□□ -0.14
CGN-206ENST00000473377 POLA1P09884 1462 aaPredicted RBP14.2□□□□□ -0.14
CGN-206ENST00000473377 URB2Q14146 1524 aaKnown RBP14.19□□□□□ -0.14
CGN-206ENST00000473377 DNMBPQ6XZF7 1577 aa14.19□□□□□ -0.14
CGN-206ENST00000473377 VPS8Q8N3P4 1428 aa14.18□□□□□ -0.14
CGN-206ENST00000473377 LAMC3Q9Y6N6 1575 aa14.18□□□□□ -0.14
CGN-206ENST00000473377 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.17□□□□□ -0.14
CGN-206ENST00000473377 CARMIL1Q5VZK9 1371 aa14.16□□□□□ -0.14
CGN-206ENST00000473377 ARAP1Q96P48 1450 aa14.14□□□□□ -0.15
CGN-206ENST00000473377 KIF21AQ7Z4S6 1674 aa14.14□□□□□ -0.15
CGN-206ENST00000473377 PDS5BQ9NTI5 1447 aa14.13□□□□□ -0.15
CGN-206ENST00000473377 TDRD9Q8NDG6 1382 aaKnown RBP14.12□□□□□ -0.15
CGN-206ENST00000473377 APLP2Q06481 763 aa14.11□□□□□ -0.15
CGN-206ENST00000473377 ABCA10Q8WWZ4 1543 aa14.1□□□□□ -0.15
CGN-206ENST00000473377 P3H3Q8IVL6 736 aa14.09□□□□□ -0.15
CGN-206ENST00000473377 ARHGAP35Q9NRY4 1499 aa14.08□□□□□ -0.16
CGN-206ENST00000473377 HNRNPUL2Q1KMD3 747 aaKnown RBP14.07□□□□□ -0.16
CGN-206ENST00000473377 KANK4Q5T7N3 995 aaPredicted RBP14.07□□□□□ -0.16
CGN-206ENST00000473377 CCER1Q8TC90 406 aaPredicted RBP14.05□□□□□ -0.16
CGN-206ENST00000473377 PHF23Q9BUL5 403 aaPredicted RBP14.03□□□□□ -0.16
CGN-206ENST00000473377 WDR97A6NE52 1622 aa14□□□□□ -0.17
CGN-206ENST00000473377 GAPVD1Q14C86 1478 aa13.98□□□□□ -0.17
CGN-206ENST00000473377 ZEB1P37275 1124 aaPredicted RBP13.98□□□□□ -0.17
CGN-206ENST00000473377 ATP1B4Q9UN42 357 aaPredicted RBP13.97□□□□□ -0.17
CGN-206ENST00000473377 AQRO60306 1485 aaKnown RBP eCLIP13.97□□□□□ -0.17
CGN-206ENST00000473377 ABCA5Q8WWZ7 1642 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms