RNA–Protein interactions for RNA: ENST00000473221.5

APTX-217, Transcript of aprataxin, humanhuman

TSL 2

Gene APTX, Length 687 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-217ENST00000473221 NISCHQ9Y2I1 1504 aa23.1■■□□□ 1.29
APTX-217ENST00000473221 CCDC180Q9P1Z9 1646 aa20.27■□□□□ 0.83
APTX-217ENST00000473221 ABCC9O60706 1549 aa19.67■□□□□ 0.74
APTX-217ENST00000473221 ZCCHC6Q5VYS8 1495 aaKnown RBP19.39■□□□□ 0.69
APTX-217ENST00000473221 DCAF1Q9Y4B6 1507 aa19.19■□□□□ 0.66
APTX-217ENST00000473221 DNAJC5BQ9UF47 199 aa19.09■□□□□ 0.65
APTX-217ENST00000473221 MYO15BQ96JP2 1530 aa19.01■□□□□ 0.63
APTX-217ENST00000473221 DCAF8L2P0C7V8 631 aa18.98■□□□□ 0.63
APTX-217ENST00000473221 NACADO15069 1562 aa18.88■□□□□ 0.61
APTX-217ENST00000473221 RB1CC1Q8TDY2 1594 aa18.71■□□□□ 0.59
APTX-217ENST00000473221 SHROOM4Q9ULL8 1493 aa18.61■□□□□ 0.57
APTX-217ENST00000473221 SCRIBQ14160 1630 aa18.48■□□□□ 0.55
APTX-217ENST00000473221 UNC13AQ9UPW8 1703 aa18.32■□□□□ 0.52
APTX-217ENST00000473221 PABPN1Q86U42 306 aaKnown RBP eCLIP18.28■□□□□ 0.52
APTX-217ENST00000473221 CHIC1Q5VXU3 224 aa18.22■□□□□ 0.51
APTX-217ENST00000473221 AEBP2Q6ZN18 517 aaPredicted RBP18.12■□□□□ 0.49
APTX-217ENST00000473221 BICRAQ9NZM4 1560 aa18.1■□□□□ 0.49
APTX-217ENST00000473221 DNAJC5Q9H3Z4 198 aa17.97■□□□□ 0.47
APTX-217ENST00000473221 SUPT5HO00267 1087 aaKnown RBP17.9■□□□□ 0.46
APTX-217ENST00000473221 CECR2Q9BXF3 1484 aa17.89■□□□□ 0.45
APTX-217ENST00000473221 BAZ1AQ9NRL2 1556 aaPredicted RBP17.87■□□□□ 0.45
APTX-217ENST00000473221 RSF1Q96T23 1441 aaPredicted RBP17.85■□□□□ 0.45
APTX-217ENST00000473221 MROH2BQ7Z745 1585 aa17.79■□□□□ 0.44
APTX-217ENST00000473221 SMARCA4P51532 1647 aa17.78■□□□□ 0.44
APTX-217ENST00000473221 CC2D2AQ9P2K1 1620 aa17.76■□□□□ 0.43
APTX-217ENST00000473221 WIZO95785 1651 aa17.66■□□□□ 0.42
APTX-217ENST00000473221 PEG3Q9GZU2 1588 aa17.62■□□□□ 0.41
APTX-217ENST00000473221 EIF4G1Q04637 1599 aaKnown RBP17.62■□□□□ 0.41
APTX-217ENST00000473221 SMARCA2P51531 1590 aa17.53■□□□□ 0.4
APTX-217ENST00000473221 TOP2AP11388 1531 aaKnown RBP17.52■□□□□ 0.39
APTX-217ENST00000473221 ATAD2BQ9ULI0 1458 aa17.5■□□□□ 0.39
APTX-217ENST00000473221 NCAPD3P42695 1498 aa17.4■□□□□ 0.38
APTX-217ENST00000473221 BAZ1BQ9UIG0 1483 aaKnown RBP17.38■□□□□ 0.37
APTX-217ENST00000473221 HMGXB3Q12766 1538 aa17.37■□□□□ 0.37
APTX-217ENST00000473221 CCDC88BA6NC98 1476 aa17.3■□□□□ 0.36
APTX-217ENST00000473221 CUX2O14529 1486 aa17.27■□□□□ 0.36
APTX-217ENST00000473221 ERCC6Q03468 1493 aa17.01■□□□□ 0.31
APTX-217ENST00000473221 CFTRP13569 1480 aa16.97■□□□□ 0.31
APTX-217ENST00000473221 PRDM2Q13029 1718 aa16.96■□□□□ 0.3
APTX-217ENST00000473221 TRIM41Q8WV44 630 aa16.92■□□□□ 0.3
APTX-217ENST00000473221 CADPSQ9ULU8 1353 aa16.91■□□□□ 0.3
APTX-217ENST00000473221 ABCC8Q09428 1581 aa16.85■□□□□ 0.29
APTX-217ENST00000473221 LAMC3Q9Y6N6 1575 aa16.83■□□□□ 0.28
APTX-217ENST00000473221 WRNQ14191 1432 aaPredicted RBP eCLIP16.81■□□□□ 0.28
APTX-217ENST00000473221 NESP48681 1621 aa16.77■□□□□ 0.27
APTX-217ENST00000473221 SYNJ1O43426 1573 aa16.73■□□□□ 0.27
APTX-217ENST00000473221 TOP2BQ02880 1626 aa16.73■□□□□ 0.27
APTX-217ENST00000473221 BIVM-ERCC5R4GMW8 1640 aa16.73■□□□□ 0.27
APTX-217ENST00000473221 FANCD2Q9BXW9 1451 aa16.7■□□□□ 0.26
APTX-217ENST00000473221 THOC2Q8NI27 1593 aaKnown RBP16.68■□□□□ 0.26
APTX-217ENST00000473221 PDS5BQ9NTI5 1447 aa16.68■□□□□ 0.26
APTX-217ENST00000473221 CUX1P39880 1505 aa16.65■□□□□ 0.26
APTX-217ENST00000473221 CEP164Q9UPV0 1460 aa16.62■□□□□ 0.25
APTX-217ENST00000473221 EEA1Q15075 1411 aa16.62■□□□□ 0.25
APTX-217ENST00000473221 DNMBPQ6XZF7 1577 aa16.58■□□□□ 0.24
APTX-217ENST00000473221 KIF21AQ7Z4S6 1674 aa16.58■□□□□ 0.24
APTX-217ENST00000473221 SOGA1O94964 1423 aa16.53■□□□□ 0.24
APTX-217ENST00000473221 TOPBP1Q92547 1522 aa16.52■□□□□ 0.24
APTX-217ENST00000473221 FAM9AQ8IZU1 332 aaPredicted RBP16.51■□□□□ 0.23
APTX-217ENST00000473221 FGD5Q6ZNL6 1462 aa16.49■□□□□ 0.23
APTX-217ENST00000473221 URB2Q14146 1524 aaKnown RBP16.49■□□□□ 0.23
APTX-217ENST00000473221 RUSC2Q8N2Y8 1516 aa16.46■□□□□ 0.23
APTX-217ENST00000473221 CSRNP3Q8WYN3 585 aa16.46■□□□□ 0.23
APTX-217ENST00000473221 OSCARQ8IYS5 282 aa16.45■□□□□ 0.22
APTX-217ENST00000473221 MRC2Q9UBG0 1479 aa16.45■□□□□ 0.22
APTX-217ENST00000473221 POLA1P09884 1462 aaPredicted RBP16.43■□□□□ 0.22
APTX-217ENST00000473221 LOC105371045A0A1W2PR82 267 aa16.43■□□□□ 0.22
APTX-217ENST00000473221 KIF27Q86VH2 1401 aa16.43■□□□□ 0.22
APTX-217ENST00000473221 WDR62O43379 1518 aa16.39■□□□□ 0.21
APTX-217ENST00000473221 ABCA10Q8WWZ4 1543 aa16.38■□□□□ 0.21
APTX-217ENST00000473221 KIF21BO75037 1637 aa16.37■□□□□ 0.21
APTX-217ENST00000473221 WDR97A6NE52 1622 aa16.35■□□□□ 0.21
APTX-217ENST00000473221 RAD54L2Q9Y4B4 1467 aa16.33■□□□□ 0.2
APTX-217ENST00000473221 GOLGA3Q08378 1498 aa16.32■□□□□ 0.2
APTX-217ENST00000473221 TARBP1Q13395 1621 aaKnown RBP16.3■□□□□ 0.2
APTX-217ENST00000473221 ERICH3Q5RHP9 1530 aa16.29■□□□□ 0.2
APTX-217ENST00000473221 PRXQ9BXM0 1461 aa16.29■□□□□ 0.2
APTX-217ENST00000473221 IGF1RP08069 1367 aa16.26■□□□□ 0.19
APTX-217ENST00000473221 ABCA5Q8WWZ7 1642 aa16.26■□□□□ 0.19
APTX-217ENST00000473221 TNIKQ9UKE5 1360 aa16.26■□□□□ 0.19
APTX-217ENST00000473221 IFT140Q96RY7 1462 aa16.25■□□□□ 0.19
APTX-217ENST00000473221 CUL7Q14999 1698 aa16.21■□□□□ 0.19
APTX-217ENST00000473221 RAPGEF2Q9Y4G8 1499 aa16.21■□□□□ 0.19
APTX-217ENST00000473221 UBTFP17480 764 aaKnown RBP16.2■□□□□ 0.18
APTX-217ENST00000473221 GAPVD1Q14C86 1478 aa16.2■□□□□ 0.18
APTX-217ENST00000473221 CARMIL1Q5VZK9 1371 aa16.18■□□□□ 0.18
APTX-217ENST00000473221 EHMT2Q96KQ7 1210 aa16.18■□□□□ 0.18
APTX-217ENST00000473221 TDRD9Q8NDG6 1382 aaKnown RBP16.17■□□□□ 0.18
APTX-217ENST00000473221 RIMBP3CA6NJZ7 1639 aa16.15■□□□□ 0.18
APTX-217ENST00000473221 RIMBP3BA6NNM3 1639 aa16.15■□□□□ 0.18
APTX-217ENST00000473221 RIMBP3Q9UFD9 1639 aa16.15■□□□□ 0.18
APTX-217ENST00000473221 PBRM1Q86U86 1689 aa16.14■□□□□ 0.18
APTX-217ENST00000473221 GRIN2BQ13224 1484 aa16.11■□□□□ 0.17
APTX-217ENST00000473221 CEP162Q5TB80 1403 aa16.11■□□□□ 0.17
APTX-217ENST00000473221 AQRO60306 1485 aaKnown RBP eCLIP16.1■□□□□ 0.17
APTX-217ENST00000473221 ZNF608Q9ULD9 1512 aaPredicted RBP16.09■□□□□ 0.17
APTX-217ENST00000473221 ARHGEF11O15085 1522 aa16.08■□□□□ 0.16
APTX-217ENST00000473221 EIF4G3O43432 1585 aaKnown RBP16.08■□□□□ 0.16
APTX-217ENST00000473221 PHF23Q9BUL5 403 aaPredicted RBP16.07■□□□□ 0.16
APTX-217ENST00000473221 FHAD1B1AJZ9 1412 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms