RNA–Protein interactions for RNA: ENST00000472822.5

KDM5B-207, Transcript of lysine demethylase 5B, humanhuman

TSL 1 (best)

Gene KDM5B, Length 1,648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5B-207ENST00000472822 NISCHQ9Y2I1 1504 aa21.36■■□□□ 1.01
KDM5B-207ENST00000472822 CCDC180Q9P1Z9 1646 aa18.68■□□□□ 0.58
KDM5B-207ENST00000472822 AEBP2Q6ZN18 517 aaPredicted RBP18.2■□□□□ 0.5
KDM5B-207ENST00000472822 ZCCHC6Q5VYS8 1495 aaKnown RBP17.89■□□□□ 0.45
KDM5B-207ENST00000472822 ABCC9O60706 1549 aa17.89■□□□□ 0.45
KDM5B-207ENST00000472822 DCAF8L2P0C7V8 631 aa17.65■□□□□ 0.42
KDM5B-207ENST00000472822 DCAF1Q9Y4B6 1507 aa17.65■□□□□ 0.42
KDM5B-207ENST00000472822 MYO15BQ96JP2 1530 aa17.51■□□□□ 0.39
KDM5B-207ENST00000472822 NACADO15069 1562 aa17.46■□□□□ 0.39
KDM5B-207ENST00000472822 RB1CC1Q8TDY2 1594 aa17.34■□□□□ 0.37
KDM5B-207ENST00000472822 CHIC1Q5VXU3 224 aa17.27■□□□□ 0.36
KDM5B-207ENST00000472822 SHROOM4Q9ULL8 1493 aa17.25■□□□□ 0.35
KDM5B-207ENST00000472822 SCRIBQ14160 1630 aa17.16■□□□□ 0.34
KDM5B-207ENST00000472822 UNC13AQ9UPW8 1703 aa17.06■□□□□ 0.32
KDM5B-207ENST00000472822 BICRAQ9NZM4 1560 aa16.92■□□□□ 0.3
KDM5B-207ENST00000472822 PABPN1Q86U42 306 aaKnown RBP eCLIP16.85■□□□□ 0.29
KDM5B-207ENST00000472822 CECR2Q9BXF3 1484 aa16.65■□□□□ 0.26
KDM5B-207ENST00000472822 MROH2BQ7Z745 1585 aa16.51■□□□□ 0.23
KDM5B-207ENST00000472822 RSF1Q96T23 1441 aaPredicted RBP16.5■□□□□ 0.23
KDM5B-207ENST00000472822 SUPT5HO00267 1087 aaKnown RBP16.48■□□□□ 0.23
KDM5B-207ENST00000472822 BAZ1AQ9NRL2 1556 aaPredicted RBP16.46■□□□□ 0.23
KDM5B-207ENST00000472822 SMARCA4P51532 1647 aa16.46■□□□□ 0.22
KDM5B-207ENST00000472822 EIF4G1Q04637 1599 aaKnown RBP16.37■□□□□ 0.21
KDM5B-207ENST00000472822 WIZO95785 1651 aa16.36■□□□□ 0.21
KDM5B-207ENST00000472822 PEG3Q9GZU2 1588 aa16.27■□□□□ 0.2
KDM5B-207ENST00000472822 ATAD2BQ9ULI0 1458 aa16.25■□□□□ 0.19
KDM5B-207ENST00000472822 CC2D2AQ9P2K1 1620 aa16.18■□□□□ 0.18
KDM5B-207ENST00000472822 SMARCA2P51531 1590 aa16.18■□□□□ 0.18
KDM5B-207ENST00000472822 TOP2AP11388 1531 aaKnown RBP16.15■□□□□ 0.18
KDM5B-207ENST00000472822 NCAPD3P42695 1498 aa16.15■□□□□ 0.18
KDM5B-207ENST00000472822 BAZ1BQ9UIG0 1483 aaKnown RBP16.1■□□□□ 0.17
KDM5B-207ENST00000472822 HMGXB3Q12766 1538 aa16.07■□□□□ 0.16
KDM5B-207ENST00000472822 DNAJC5BQ9UF47 199 aa16.07■□□□□ 0.16
KDM5B-207ENST00000472822 CCDC88BA6NC98 1476 aa16.01■□□□□ 0.15
KDM5B-207ENST00000472822 SENP3Q9H4L4 574 aaPredicted RBP15.83■□□□□ 0.13
KDM5B-207ENST00000472822 CFTRP13569 1480 aa15.72■□□□□ 0.11
KDM5B-207ENST00000472822 CADPSQ9ULU8 1353 aa15.7■□□□□ 0.1
KDM5B-207ENST00000472822 NESP48681 1621 aa15.67■□□□□ 0.1
KDM5B-207ENST00000472822 ABCC8Q09428 1581 aa15.6■□□□□ 0.09
KDM5B-207ENST00000472822 PRDM2Q13029 1718 aa15.59■□□□□ 0.09
KDM5B-207ENST00000472822 LAMC3Q9Y6N6 1575 aa15.59■□□□□ 0.09
KDM5B-207ENST00000472822 FANCD2Q9BXW9 1451 aa15.52■□□□□ 0.07
KDM5B-207ENST00000472822 WRNQ14191 1432 aaPredicted RBP eCLIP15.49■□□□□ 0.07
KDM5B-207ENST00000472822 TRIM41Q8WV44 630 aa15.49■□□□□ 0.07
KDM5B-207ENST00000472822 SYNJ1O43426 1573 aa15.48■□□□□ 0.07
KDM5B-207ENST00000472822 PDS5BQ9NTI5 1447 aa15.46■□□□□ 0.07
KDM5B-207ENST00000472822 KIF21AQ7Z4S6 1674 aa15.45■□□□□ 0.06
KDM5B-207ENST00000472822 PHF23Q9BUL5 403 aaPredicted RBP15.45■□□□□ 0.06
KDM5B-207ENST00000472822 CUX1P39880 1505 aa15.45■□□□□ 0.06
KDM5B-207ENST00000472822 CEP164Q9UPV0 1460 aa15.42■□□□□ 0.06
KDM5B-207ENST00000472822 TOP2BQ02880 1626 aa15.4■□□□□ 0.06
KDM5B-207ENST00000472822 BIVM-ERCC5R4GMW8 1640 aa15.4■□□□□ 0.06
KDM5B-207ENST00000472822 URB2Q14146 1524 aaKnown RBP15.38■□□□□ 0.05
KDM5B-207ENST00000472822 TOPBP1Q92547 1522 aa15.34■□□□□ 0.05
KDM5B-207ENST00000472822 DNMBPQ6XZF7 1577 aa15.33■□□□□ 0.05
KDM5B-207ENST00000472822 ERCC6Q03468 1493 aa15.29■□□□□ 0.04
KDM5B-207ENST00000472822 MRC2Q9UBG0 1479 aa15.29■□□□□ 0.04
KDM5B-207ENST00000472822 FGD5Q6ZNL6 1462 aa15.29■□□□□ 0.04
KDM5B-207ENST00000472822 SOGA1O94964 1423 aa15.28■□□□□ 0.04
KDM5B-207ENST00000472822 RUSC2Q8N2Y8 1516 aa15.26■□□□□ 0.03
KDM5B-207ENST00000472822 THOC2Q8NI27 1593 aaKnown RBP15.26■□□□□ 0.03
KDM5B-207ENST00000472822 POLA1P09884 1462 aaPredicted RBP15.25■□□□□ 0.03
KDM5B-207ENST00000472822 WDR62O43379 1518 aa15.25■□□□□ 0.03
KDM5B-207ENST00000472822 FAM9AQ8IZU1 332 aaPredicted RBP15.22■□□□□ 0.03
KDM5B-207ENST00000472822 RAD54L2Q9Y4B4 1467 aa15.22■□□□□ 0.03
KDM5B-207ENST00000472822 CUX2O14529 1486 aa15.19■□□□□ 0.02
KDM5B-207ENST00000472822 TARBP1Q13395 1621 aaKnown RBP15.15■□□□□ 0.02
KDM5B-207ENST00000472822 ABCA10Q8WWZ4 1543 aa15.15■□□□□ 0.02
KDM5B-207ENST00000472822 WDR97A6NE52 1622 aa15.13■□□□□ 0.01
KDM5B-207ENST00000472822 EEA1Q15075 1411 aa15.11■□□□□ 0.01
KDM5B-207ENST00000472822 LOC105371045A0A1W2PR82 267 aa15.11■□□□□ 0.01
KDM5B-207ENST00000472822 CSRNP3Q8WYN3 585 aa15.1■□□□□ 0.01
KDM5B-207ENST00000472822 KIF27Q86VH2 1401 aa15.1■□□□□ 0.01
KDM5B-207ENST00000472822 TDRD9Q8NDG6 1382 aaKnown RBP15.07■□□□□ 0
KDM5B-207ENST00000472822 IFT140Q96RY7 1462 aa15.07■□□□□ 0
KDM5B-207ENST00000472822 ZNF608Q9ULD9 1512 aaPredicted RBP15.06■□□□□ 0
KDM5B-207ENST00000472822 IGF1RP08069 1367 aa15.05■□□□□ 0
KDM5B-207ENST00000472822 ABCA5Q8WWZ7 1642 aa15.05■□□□□ -0
KDM5B-207ENST00000472822 AQRO60306 1485 aaKnown RBP eCLIP15.02■□□□□ -03e-6■■■■□ 20.1
KDM5B-207ENST00000472822 EHMT2Q96KQ7 1210 aa15.01□□□□□ -0.01
KDM5B-207ENST00000472822 GAPVD1Q14C86 1478 aa15.01□□□□□ -0.01
KDM5B-207ENST00000472822 PRXQ9BXM0 1461 aa15□□□□□ -0.01
KDM5B-207ENST00000472822 KIF21BO75037 1637 aa14.97□□□□□ -0.01
KDM5B-207ENST00000472822 RAPGEF2Q9Y4G8 1499 aa14.96□□□□□ -0.01
KDM5B-207ENST00000472822 EIF4G3O43432 1585 aaKnown RBP14.96□□□□□ -0.01
KDM5B-207ENST00000472822 ERICH3Q5RHP9 1530 aa14.94□□□□□ -0.02
KDM5B-207ENST00000472822 PBRM1Q86U86 1689 aa14.94□□□□□ -0.02
KDM5B-207ENST00000472822 CARMIL1Q5VZK9 1371 aa14.94□□□□□ -0.02
KDM5B-207ENST00000472822 GOLGA3Q08378 1498 aa14.91□□□□□ -0.02
KDM5B-207ENST00000472822 GRIN2BQ13224 1484 aa14.91□□□□□ -0.02
KDM5B-207ENST00000472822 CUL7Q14999 1698 aa14.88□□□□□ -0.03
KDM5B-207ENST00000472822 TNIKQ9UKE5 1360 aa14.86□□□□□ -0.03
KDM5B-207ENST00000472822 ADAMTS12P58397 1594 aa14.86□□□□□ -0.03
KDM5B-207ENST00000472822 SNAPC4Q5SXM2 1469 aa14.85□□□□□ -0.03
KDM5B-207ENST00000472822 UBTFP17480 764 aaKnown RBP14.84□□□□□ -0.03
KDM5B-207ENST00000472822 FHAD1B1AJZ9 1412 aa14.84□□□□□ -0.03
KDM5B-207ENST00000472822 MAGI1Q96QZ7 1491 aaPredicted RBP14.81□□□□□ -0.04
KDM5B-207ENST00000472822 SYNJ2O15056 1496 aa14.76□□□□□ -0.05
KDM5B-207ENST00000472822 CEP162Q5TB80 1403 aa14.75□□□□□ -0.05
KDM5B-207ENST00000472822 GRIN2AQ12879 1464 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms