RNA–Protein interactions for RNA: ENST00000472508.1

GTF2A2-206, Transcript of general transcription factor IIA subunit 2, humanhuman

TSL 3

Gene GTF2A2, Length 202 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A2-206ENST00000472508 NISCHQ9Y2I1 1504 aa32.56■■■□□ 2.8
GTF2A2-206ENST00000472508 CCDC180Q9P1Z9 1646 aa29.02■■■□□ 2.24
GTF2A2-206ENST00000472508 ABCC9O60706 1549 aa28.91■■■□□ 2.22
GTF2A2-206ENST00000472508 DCAF8L2P0C7V8 631 aa27.69■■■□□ 2.02
GTF2A2-206ENST00000472508 RB1CC1Q8TDY2 1594 aa27.6■■■□□ 2.01
GTF2A2-206ENST00000472508 NACADO15069 1562 aa27.46■■□□□ 1.99
GTF2A2-206ENST00000472508 MYO15BQ96JP2 1530 aa27.12■■□□□ 1.93
GTF2A2-206ENST00000472508 PABPN1Q86U42 306 aaKnown RBP eCLIP27.05■■□□□ 1.92
GTF2A2-206ENST00000472508 ZCCHC6Q5VYS8 1495 aaKnown RBP27■■□□□ 1.91
GTF2A2-206ENST00000472508 DCAF1Q9Y4B6 1507 aa26.87■■□□□ 1.89
GTF2A2-206ENST00000472508 DNAJC5BQ9UF47 199 aa26.86■■□□□ 1.89
GTF2A2-206ENST00000472508 UNC13AQ9UPW8 1703 aa26.79■■□□□ 1.88
GTF2A2-206ENST00000472508 BICRAQ9NZM4 1560 aa26.66■■□□□ 1.86
GTF2A2-206ENST00000472508 SCRIBQ14160 1630 aa26.54■■□□□ 1.84
GTF2A2-206ENST00000472508 SHROOM4Q9ULL8 1493 aa26.41■■□□□ 1.82
GTF2A2-206ENST00000472508 EIF4G1Q04637 1599 aaKnown RBP26.06■■□□□ 1.76
GTF2A2-206ENST00000472508 CC2D2AQ9P2K1 1620 aa26.05■■□□□ 1.76
GTF2A2-206ENST00000472508 CECR2Q9BXF3 1484 aa26.02■■□□□ 1.76
GTF2A2-206ENST00000472508 NCAPD3P42695 1498 aa25.36■■□□□ 1.65
GTF2A2-206ENST00000472508 ATAD2BQ9ULI0 1458 aa25.32■■□□□ 1.64
GTF2A2-206ENST00000472508 SMARCA4P51532 1647 aa25.3■■□□□ 1.64
GTF2A2-206ENST00000472508 BAZ1AQ9NRL2 1556 aaPredicted RBP25.28■■□□□ 1.64
GTF2A2-206ENST00000472508 SMARCA2P51531 1590 aa25.27■■□□□ 1.64
GTF2A2-206ENST00000472508 HMGXB3Q12766 1538 aa25.14■■□□□ 1.62
GTF2A2-206ENST00000472508 BAZ1BQ9UIG0 1483 aaKnown RBP25.14■■□□□ 1.61
GTF2A2-206ENST00000472508 MROH2BQ7Z745 1585 aa25.08■■□□□ 1.61
GTF2A2-206ENST00000472508 PEG3Q9GZU2 1588 aa25.02■■□□□ 1.6
GTF2A2-206ENST00000472508 ERCC6Q03468 1493 aa25.02■■□□□ 1.6
GTF2A2-206ENST00000472508 NESP48681 1621 aa24.86■■□□□ 1.57
GTF2A2-206ENST00000472508 CUX2O14529 1486 aa24.77■■□□□ 1.56
GTF2A2-206ENST00000472508 WIZO95785 1651 aa24.77■■□□□ 1.56
GTF2A2-206ENST00000472508 LAMC3Q9Y6N6 1575 aa24.72■■□□□ 1.55
GTF2A2-206ENST00000472508 RSF1Q96T23 1441 aaPredicted RBP24.71■■□□□ 1.55
GTF2A2-206ENST00000472508 PDS5BQ9NTI5 1447 aa24.69■■□□□ 1.54
GTF2A2-206ENST00000472508 CADPSQ9ULU8 1353 aa24.67■■□□□ 1.54
GTF2A2-206ENST00000472508 DNAJC5Q9H3Z4 198 aa24.54■■□□□ 1.52
GTF2A2-206ENST00000472508 TOP2AP11388 1531 aaKnown RBP24.5■■□□□ 1.51
GTF2A2-206ENST00000472508 KIF21AQ7Z4S6 1674 aa24.46■■□□□ 1.51
GTF2A2-206ENST00000472508 THOC2Q8NI27 1593 aaKnown RBP24.46■■□□□ 1.51
GTF2A2-206ENST00000472508 MRC2Q9UBG0 1479 aa24.38■■□□□ 1.49
GTF2A2-206ENST00000472508 CFTRP13569 1480 aa24.38■■□□□ 1.49
GTF2A2-206ENST00000472508 FANCD2Q9BXW9 1451 aa24.36■■□□□ 1.49
GTF2A2-206ENST00000472508 CEP164Q9UPV0 1460 aa24.36■■□□□ 1.49
GTF2A2-206ENST00000472508 CCDC88BA6NC98 1476 aa24.27■■□□□ 1.48
GTF2A2-206ENST00000472508 WDR62O43379 1518 aa24.25■■□□□ 1.47
GTF2A2-206ENST00000472508 URB2Q14146 1524 aaKnown RBP24.07■■□□□ 1.44
GTF2A2-206ENST00000472508 SUPT5HO00267 1087 aaKnown RBP24.03■■□□□ 1.44
GTF2A2-206ENST00000472508 PRDM2Q13029 1718 aa24.01■■□□□ 1.43
GTF2A2-206ENST00000472508 ABCC8Q09428 1581 aa23.93■■□□□ 1.42
GTF2A2-206ENST00000472508 TOPBP1Q92547 1522 aa23.89■■□□□ 1.41
GTF2A2-206ENST00000472508 IFT140Q96RY7 1462 aa23.87■■□□□ 1.41
GTF2A2-206ENST00000472508 OSCARQ8IYS5 282 aa23.85■■□□□ 1.41
GTF2A2-206ENST00000472508 DNMBPQ6XZF7 1577 aa23.81■■□□□ 1.4
GTF2A2-206ENST00000472508 ZNF608Q9ULD9 1512 aaPredicted RBP23.75■■□□□ 1.39
GTF2A2-206ENST00000472508 TRIM41Q8WV44 630 aa23.69■■□□□ 1.38
GTF2A2-206ENST00000472508 POLA1P09884 1462 aaPredicted RBP23.66■■□□□ 1.38
GTF2A2-206ENST00000472508 SOGA1O94964 1423 aa23.66■■□□□ 1.38
GTF2A2-206ENST00000472508 AQRO60306 1485 aaKnown RBP eCLIP23.64■■□□□ 1.38
GTF2A2-206ENST00000472508 FBLN2P98095 1184 aa23.61■■□□□ 1.37
GTF2A2-206ENST00000472508 RAD54L2Q9Y4B4 1467 aa23.6■■□□□ 1.37
GTF2A2-206ENST00000472508 TARBP1Q13395 1621 aaKnown RBP23.59■■□□□ 1.37
GTF2A2-206ENST00000472508 EIF4G3O43432 1585 aaKnown RBP23.58■■□□□ 1.37
GTF2A2-206ENST00000472508 TDRD9Q8NDG6 1382 aaKnown RBP23.57■■□□□ 1.36
GTF2A2-206ENST00000472508 FGD5Q6ZNL6 1462 aa23.56■■□□□ 1.36
GTF2A2-206ENST00000472508 CUX1P39880 1505 aa23.55■■□□□ 1.36
GTF2A2-206ENST00000472508 CHMP7Q8WUX9 453 aaPredicted RBP23.45■■□□□ 1.34
GTF2A2-206ENST00000472508 WDR97A6NE52 1622 aa23.4■■□□□ 1.34
GTF2A2-206ENST00000472508 GRIN2BQ13224 1484 aa23.37■■□□□ 1.33
GTF2A2-206ENST00000472508 SNAPC4Q5SXM2 1469 aa23.37■■□□□ 1.33
GTF2A2-206ENST00000472508 WRNQ14191 1432 aaPredicted RBP eCLIP23.36■■□□□ 1.33
GTF2A2-206ENST00000472508 GAPVD1Q14C86 1478 aa23.34■■□□□ 1.33
GTF2A2-206ENST00000472508 CHD1O14646 1710 aa23.33■■□□□ 1.32
GTF2A2-206ENST00000472508 MAGI1Q96QZ7 1491 aaPredicted RBP23.32■■□□□ 1.32
GTF2A2-206ENST00000472508 ABCA10Q8WWZ4 1543 aa23.3■■□□□ 1.32
GTF2A2-206ENST00000472508 RIMBP3CA6NJZ7 1639 aa23.3■■□□□ 1.32
GTF2A2-206ENST00000472508 RIMBP3BA6NNM3 1639 aa23.3■■□□□ 1.32
GTF2A2-206ENST00000472508 RIMBP3Q9UFD9 1639 aa23.3■■□□□ 1.32
GTF2A2-206ENST00000472508 ARHGEF11O15085 1522 aa23.28■■□□□ 1.32
GTF2A2-206ENST00000472508 CYB5RLQ6IPT4 315 aa23.28■■□□□ 1.32
GTF2A2-206ENST00000472508 SYNJ2O15056 1496 aa23.25■■□□□ 1.31
GTF2A2-206ENST00000472508 TOP2BQ02880 1626 aa23.23■■□□□ 1.31
GTF2A2-206ENST00000472508 SYNJ1O43426 1573 aa23.2■■□□□ 1.3
GTF2A2-206ENST00000472508 BIVM-ERCC5R4GMW8 1640 aa23.19■■□□□ 1.3
GTF2A2-206ENST00000472508 PBRM1Q86U86 1689 aa23.17■■□□□ 1.3
GTF2A2-206ENST00000472508 ABCA5Q8WWZ7 1642 aa23.16■■□□□ 1.3
GTF2A2-206ENST00000472508 CLASP1Q7Z460 1538 aa23.08■■□□□ 1.29
GTF2A2-206ENST00000472508 ARAP1Q96P48 1450 aa23.06■■□□□ 1.28
GTF2A2-206ENST00000472508 FHAD1B1AJZ9 1412 aa23.06■■□□□ 1.28
GTF2A2-206ENST00000472508 GRIN2AQ12879 1464 aa23.04■■□□□ 1.28
GTF2A2-206ENST00000472508 ERICH3Q5RHP9 1530 aa23.02■■□□□ 1.28
GTF2A2-206ENST00000472508 TRHP20396 242 aaPredicted RBP23.01■■□□□ 1.27
GTF2A2-206ENST00000472508 ADAMTS12P58397 1594 aa22.99■■□□□ 1.27
GTF2A2-206ENST00000472508 KIF27Q86VH2 1401 aa22.93■■□□□ 1.26
GTF2A2-206ENST00000472508 NUP160Q12769 1436 aa22.92■■□□□ 1.26
GTF2A2-206ENST00000472508 CEP170Q5SW79 1584 aa22.88■■□□□ 1.25
GTF2A2-206ENST00000472508 IGF1RP08069 1367 aa22.86■■□□□ 1.25
GTF2A2-206ENST00000472508 JPH4Q96JJ6 628 aa22.85■■□□□ 1.25
GTF2A2-206ENST00000472508 PRG4Q92954 1404 aaPredicted RBP22.78■■□□□ 1.24
GTF2A2-206ENST00000472508 ERCC6L2Q5T890 1561 aa22.76■■□□□ 1.23
GTF2A2-206ENST00000472508 CARMIL1Q5VZK9 1371 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms