RNA–Protein interactions for RNA: ENST00000472496.1

RUFY4-207, Transcript of RUN and FYVE domain containing 4, humanhuman

TSL 4

Gene RUFY4, Length 548 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4-207ENST00000472496 NISCHQ9Y2I1 1504 aa35.34■■■■□ 3.25
RUFY4-207ENST00000472496 CCDC180Q9P1Z9 1646 aa31.29■■■□□ 2.6
RUFY4-207ENST00000472496 ABCC9O60706 1549 aa30.45■■■□□ 2.47
RUFY4-207ENST00000472496 ZCCHC6Q5VYS8 1495 aaKnown RBP29.51■■■□□ 2.31
RUFY4-207ENST00000472496 NACADO15069 1562 aa29.38■■■□□ 2.29
RUFY4-207ENST00000472496 MYO15BQ96JP2 1530 aa29.33■■■□□ 2.29
RUFY4-207ENST00000472496 RB1CC1Q8TDY2 1594 aa29.33■■■□□ 2.29
RUFY4-207ENST00000472496 DCAF1Q9Y4B6 1507 aa29.26■■■□□ 2.27
RUFY4-207ENST00000472496 DCAF8L2P0C7V8 631 aa29.23■■■□□ 2.27
RUFY4-207ENST00000472496 UNC13AQ9UPW8 1703 aa28.72■■■□□ 2.19
RUFY4-207ENST00000472496 BICRAQ9NZM4 1560 aa28.58■■■□□ 2.17
RUFY4-207ENST00000472496 SCRIBQ14160 1630 aa28.57■■■□□ 2.16
RUFY4-207ENST00000472496 PABPN1Q86U42 306 aaKnown RBP eCLIP28.47■■■□□ 2.15
RUFY4-207ENST00000472496 SHROOM4Q9ULL8 1493 aa28.21■■■□□ 2.11
RUFY4-207ENST00000472496 DNAJC5BQ9UF47 199 aa27.89■■■□□ 2.06
RUFY4-207ENST00000472496 EIF4G1Q04637 1599 aaKnown RBP27.74■■■□□ 2.03
RUFY4-207ENST00000472496 CC2D2AQ9P2K1 1620 aa27.56■■■□□ 2
RUFY4-207ENST00000472496 CECR2Q9BXF3 1484 aa27.55■■■□□ 2
RUFY4-207ENST00000472496 SMARCA4P51532 1647 aa27.37■■□□□ 1.97
RUFY4-207ENST00000472496 BAZ1AQ9NRL2 1556 aaPredicted RBP27.32■■□□□ 1.96
RUFY4-207ENST00000472496 MROH2BQ7Z745 1585 aa27.26■■□□□ 1.95
RUFY4-207ENST00000472496 ATAD2BQ9ULI0 1458 aa27.2■■□□□ 1.95
RUFY4-207ENST00000472496 NCAPD3P42695 1498 aa27.16■■□□□ 1.94
RUFY4-207ENST00000472496 PEG3Q9GZU2 1588 aa27.15■■□□□ 1.94
RUFY4-207ENST00000472496 SMARCA2P51531 1590 aa27.1■■□□□ 1.93
RUFY4-207ENST00000472496 HMGXB3Q12766 1538 aa27.02■■□□□ 1.92
RUFY4-207ENST00000472496 RSF1Q96T23 1441 aaPredicted RBP27.01■■□□□ 1.91
RUFY4-207ENST00000472496 WIZO95785 1651 aa26.93■■□□□ 1.9
RUFY4-207ENST00000472496 BAZ1BQ9UIG0 1483 aaKnown RBP26.91■■□□□ 1.9
RUFY4-207ENST00000472496 TOP2AP11388 1531 aaKnown RBP26.66■■□□□ 1.86
RUFY4-207ENST00000472496 NESP48681 1621 aa26.45■■□□□ 1.82
RUFY4-207ENST00000472496 CCDC88BA6NC98 1476 aa26.36■■□□□ 1.81
RUFY4-207ENST00000472496 LAMC3Q9Y6N6 1575 aa26.34■■□□□ 1.81
RUFY4-207ENST00000472496 CADPSQ9ULU8 1353 aa26.33■■□□□ 1.81
RUFY4-207ENST00000472496 SUPT5HO00267 1087 aaKnown RBP26.29■■□□□ 1.8
RUFY4-207ENST00000472496 CFTRP13569 1480 aa26.26■■□□□ 1.79
RUFY4-207ENST00000472496 ERCC6Q03468 1493 aa26.14■■□□□ 1.78
RUFY4-207ENST00000472496 PDS5BQ9NTI5 1447 aa26.13■■□□□ 1.77
RUFY4-207ENST00000472496 KIF21AQ7Z4S6 1674 aa26.09■■□□□ 1.77
RUFY4-207ENST00000472496 FANCD2Q9BXW9 1451 aa26.03■■□□□ 1.76
RUFY4-207ENST00000472496 THOC2Q8NI27 1593 aaKnown RBP26.03■■□□□ 1.76
RUFY4-207ENST00000472496 PRDM2Q13029 1718 aa25.98■■□□□ 1.75
RUFY4-207ENST00000472496 CEP164Q9UPV0 1460 aa25.94■■□□□ 1.74
RUFY4-207ENST00000472496 MRC2Q9UBG0 1479 aa25.91■■□□□ 1.74
RUFY4-207ENST00000472496 CUX2O14529 1486 aa25.88■■□□□ 1.73
RUFY4-207ENST00000472496 WDR62O43379 1518 aa25.86■■□□□ 1.73
RUFY4-207ENST00000472496 URB2Q14146 1524 aaKnown RBP25.82■■□□□ 1.72
RUFY4-207ENST00000472496 TOPBP1Q92547 1522 aa25.65■■□□□ 1.7
RUFY4-207ENST00000472496 DNMBPQ6XZF7 1577 aa25.62■■□□□ 1.69
RUFY4-207ENST00000472496 ABCC8Q09428 1581 aa25.57■■□□□ 1.68
RUFY4-207ENST00000472496 CUX1P39880 1505 aa25.57■■□□□ 1.68
RUFY4-207ENST00000472496 POLA1P09884 1462 aaPredicted RBP25.47■■□□□ 1.67
RUFY4-207ENST00000472496 IFT140Q96RY7 1462 aa25.41■■□□□ 1.66
RUFY4-207ENST00000472496 FGD5Q6ZNL6 1462 aa25.4■■□□□ 1.66
RUFY4-207ENST00000472496 WRNQ14191 1432 aaPredicted RBP eCLIP25.39■■□□□ 1.66
RUFY4-207ENST00000472496 TARBP1Q13395 1621 aaKnown RBP25.39■■□□□ 1.66
RUFY4-207ENST00000472496 SYNJ1O43426 1573 aa25.39■■□□□ 1.65
RUFY4-207ENST00000472496 ZNF608Q9ULD9 1512 aaPredicted RBP25.35■■□□□ 1.65
RUFY4-207ENST00000472496 RAD54L2Q9Y4B4 1467 aa25.34■■□□□ 1.65
RUFY4-207ENST00000472496 TOP2BQ02880 1626 aa25.34■■□□□ 1.65
RUFY4-207ENST00000472496 BIVM-ERCC5R4GMW8 1640 aa25.34■■□□□ 1.65
RUFY4-207ENST00000472496 SOGA1O94964 1423 aa25.29■■□□□ 1.64
RUFY4-207ENST00000472496 WDR97A6NE52 1622 aa25.22■■□□□ 1.63
RUFY4-207ENST00000472496 EIF4G3O43432 1585 aaKnown RBP25.22■■□□□ 1.63
RUFY4-207ENST00000472496 AQRO60306 1485 aaKnown RBP eCLIP25.19■■□□□ 1.62
RUFY4-207ENST00000472496 ABCA10Q8WWZ4 1543 aa25.18■■□□□ 1.62
RUFY4-207ENST00000472496 TDRD9Q8NDG6 1382 aaKnown RBP25.16■■□□□ 1.62
RUFY4-207ENST00000472496 ABCA5Q8WWZ7 1642 aa25.08■■□□□ 1.61
RUFY4-207ENST00000472496 GAPVD1Q14C86 1478 aa25.02■■□□□ 1.6
RUFY4-207ENST00000472496 GRIN2BQ13224 1484 aa24.99■■□□□ 1.59
RUFY4-207ENST00000472496 SNAPC4Q5SXM2 1469 aa24.96■■□□□ 1.59
RUFY4-207ENST00000472496 PBRM1Q86U86 1689 aa24.94■■□□□ 1.58
RUFY4-207ENST00000472496 MAGI1Q96QZ7 1491 aaPredicted RBP24.91■■□□□ 1.58
RUFY4-207ENST00000472496 DNAJC5Q9H3Z4 198 aa24.88■■□□□ 1.57
RUFY4-207ENST00000472496 ERICH3Q5RHP9 1530 aa24.86■■□□□ 1.57
RUFY4-207ENST00000472496 CHD1O14646 1710 aa24.82■■□□□ 1.56
RUFY4-207ENST00000472496 ADAMTS12P58397 1594 aa24.82■■□□□ 1.56
RUFY4-207ENST00000472496 KIF27Q86VH2 1401 aa24.82■■□□□ 1.56
RUFY4-207ENST00000472496 SYNJ2O15056 1496 aa24.82■■□□□ 1.56
RUFY4-207ENST00000472496 TRIM41Q8WV44 630 aa24.81■■□□□ 1.56
RUFY4-207ENST00000472496 IGF1RP08069 1367 aa24.78■■□□□ 1.56
RUFY4-207ENST00000472496 OSCARQ8IYS5 282 aa24.76■■□□□ 1.55
RUFY4-207ENST00000472496 RUSC2Q8N2Y8 1516 aa24.76■■□□□ 1.55
RUFY4-207ENST00000472496 CHIC1Q5VXU3 224 aa24.75■■□□□ 1.55
RUFY4-207ENST00000472496 FHAD1B1AJZ9 1412 aa24.74■■□□□ 1.55
RUFY4-207ENST00000472496 GRIN2AQ12879 1464 aa24.7■■□□□ 1.54
RUFY4-207ENST00000472496 FBLN2P98095 1184 aa24.69■■□□□ 1.54
RUFY4-207ENST00000472496 CHMP7Q8WUX9 453 aaPredicted RBP24.69■■□□□ 1.54
RUFY4-207ENST00000472496 CLASP1Q7Z460 1538 aa24.65■■□□□ 1.54
RUFY4-207ENST00000472496 NUP160Q12769 1436 aa24.63■■□□□ 1.53
RUFY4-207ENST00000472496 CUL7Q14999 1698 aa24.62■■□□□ 1.53
RUFY4-207ENST00000472496 CEP170Q5SW79 1584 aa24.59■■□□□ 1.53
RUFY4-207ENST00000472496 CARMIL1Q5VZK9 1371 aa24.57■■□□□ 1.52
RUFY4-207ENST00000472496 PRXQ9BXM0 1461 aa24.49■■□□□ 1.51
RUFY4-207ENST00000472496 ARHGEF11O15085 1522 aa24.46■■□□□ 1.51
RUFY4-207ENST00000472496 EEA1Q15075 1411 aa24.45■■□□□ 1.51
RUFY4-207ENST00000472496 RAPGEF2Q9Y4G8 1499 aa24.45■■□□□ 1.5
RUFY4-207ENST00000472496 RIMBP3CA6NJZ7 1639 aa24.43■■□□□ 1.5
RUFY4-207ENST00000472496 RIMBP3BA6NNM3 1639 aa24.43■■□□□ 1.5
RUFY4-207ENST00000472496 RIMBP3Q9UFD9 1639 aa24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms