RNA–Protein interactions for RNA: ENST00000472349.1

PLSCR1-208, Transcript of phospholipid scramblase 1, humanhuman

TSL 5

Gene PLSCR1, Length 1,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLSCR1-208ENST00000472349 NISCHQ9Y2I1 1504 aa39.79■■■■□ 3.96
PLSCR1-208ENST00000472349 CCDC180Q9P1Z9 1646 aa34.91■■■■□ 3.18
PLSCR1-208ENST00000472349 ZCCHC6Q5VYS8 1495 aaKnown RBP33.37■■■□□ 2.93
PLSCR1-208ENST00000472349 ABCC9O60706 1549 aa33.18■■■□□ 2.9
PLSCR1-208ENST00000472349 DCAF1Q9Y4B6 1507 aa33.03■■■□□ 2.88
PLSCR1-208ENST00000472349 MYO15BQ96JP2 1530 aa32.83■■■□□ 2.85
PLSCR1-208ENST00000472349 DCAF8L2P0C7V8 631 aa32.71■■■□□ 2.83
PLSCR1-208ENST00000472349 NACADO15069 1562 aa32.62■■■□□ 2.81
PLSCR1-208ENST00000472349 RB1CC1Q8TDY2 1594 aa32.39■■■□□ 2.78
PLSCR1-208ENST00000472349 SHROOM4Q9ULL8 1493 aa31.93■■■□□ 2.7
PLSCR1-208ENST00000472349 SCRIBQ14160 1630 aa31.88■■■□□ 2.69
PLSCR1-208ENST00000472349 UNC13AQ9UPW8 1703 aa31.5■■■□□ 2.63
PLSCR1-208ENST00000472349 BICRAQ9NZM4 1560 aa31.36■■■□□ 2.61
PLSCR1-208ENST00000472349 PABPN1Q86U42 306 aaKnown RBP eCLIP31.16■■■□□ 2.58
PLSCR1-208ENST00000472349 CECR2Q9BXF3 1484 aa30.84■■■□□ 2.53
PLSCR1-208ENST00000472349 BAZ1AQ9NRL2 1556 aaPredicted RBP30.77■■■□□ 2.52
PLSCR1-208ENST00000472349 RSF1Q96T23 1441 aaPredicted RBP30.7■■■□□ 2.5
PLSCR1-208ENST00000472349 MROH2BQ7Z745 1585 aa30.65■■■□□ 2.5
PLSCR1-208ENST00000472349 SMARCA4P51532 1647 aa30.62■■■□□ 2.49
PLSCR1-208ENST00000472349 SUPT5HO00267 1087 aaKnown RBP30.56■■■□□ 2.48
PLSCR1-208ENST00000472349 EIF4G1Q04637 1599 aaKnown RBP30.46■■■□□ 2.47
PLSCR1-208ENST00000472349 PEG3Q9GZU2 1588 aa30.38■■■□□ 2.45
PLSCR1-208ENST00000472349 WIZO95785 1651 aa30.3■■■□□ 2.44
PLSCR1-208ENST00000472349 SMARCA2P51531 1590 aa30.27■■■□□ 2.44
PLSCR1-208ENST00000472349 ATAD2BQ9ULI0 1458 aa30.25■■■□□ 2.43
PLSCR1-208ENST00000472349 TOP2AP11388 1531 aaKnown RBP30.13■■■□□ 2.41
PLSCR1-208ENST00000472349 NCAPD3P42695 1498 aa30.12■■■□□ 2.41
PLSCR1-208ENST00000472349 HMGXB3Q12766 1538 aa30.06■■■□□ 2.4
PLSCR1-208ENST00000472349 CC2D2AQ9P2K1 1620 aa30.05■■■□□ 2.4
PLSCR1-208ENST00000472349 BAZ1BQ9UIG0 1483 aaKnown RBP30.05■■■□□ 2.4
PLSCR1-208ENST00000472349 CCDC88BA6NC98 1476 aa29.76■■■□□ 2.35
PLSCR1-208ENST00000472349 AEBP2Q6ZN18 517 aaPredicted RBP29.59■■■□□ 2.33
PLSCR1-208ENST00000472349 DNAJC5BQ9UF47 199 aa29.56■■■□□ 2.32
PLSCR1-208ENST00000472349 CFTRP13569 1480 aa29.32■■■□□ 2.28
PLSCR1-208ENST00000472349 CADPSQ9ULU8 1353 aa29.28■■■□□ 2.28
PLSCR1-208ENST00000472349 CHIC1Q5VXU3 224 aa29.16■■■□□ 2.26
PLSCR1-208ENST00000472349 LAMC3Q9Y6N6 1575 aa29.13■■■□□ 2.25
PLSCR1-208ENST00000472349 PRDM2Q13029 1718 aa29.02■■■□□ 2.24
PLSCR1-208ENST00000472349 NESP48681 1621 aa28.99■■■□□ 2.23
PLSCR1-208ENST00000472349 PDS5BQ9NTI5 1447 aa28.93■■■□□ 2.22
PLSCR1-208ENST00000472349 FANCD2Q9BXW9 1451 aa28.91■■■□□ 2.22
PLSCR1-208ENST00000472349 WRNQ14191 1432 aaPredicted RBP eCLIP28.91■■■□□ 2.22
PLSCR1-208ENST00000472349 ABCC8Q09428 1581 aa28.91■■■□□ 2.22
PLSCR1-208ENST00000472349 TRIM41Q8WV44 630 aa28.87■■■□□ 2.21
PLSCR1-208ENST00000472349 CEP164Q9UPV0 1460 aa28.79■■■□□ 2.2
PLSCR1-208ENST00000472349 SYNJ1O43426 1573 aa28.73■■■□□ 2.19
PLSCR1-208ENST00000472349 TOP2BQ02880 1626 aa28.72■■■□□ 2.19
PLSCR1-208ENST00000472349 CUX1P39880 1505 aa28.7■■■□□ 2.19
PLSCR1-208ENST00000472349 BIVM-ERCC5R4GMW8 1640 aa28.69■■■□□ 2.18
PLSCR1-208ENST00000472349 KIF21AQ7Z4S6 1674 aa28.62■■■□□ 2.17
PLSCR1-208ENST00000472349 DNMBPQ6XZF7 1577 aa28.61■■■□□ 2.17
PLSCR1-208ENST00000472349 URB2Q14146 1524 aaKnown RBP28.56■■■□□ 2.16
PLSCR1-208ENST00000472349 TOPBP1Q92547 1522 aa28.56■■■□□ 2.16
PLSCR1-208ENST00000472349 MRC2Q9UBG0 1479 aa28.55■■■□□ 2.16
PLSCR1-208ENST00000472349 ERCC6Q03468 1493 aa28.54■■■□□ 2.16
PLSCR1-208ENST00000472349 FGD5Q6ZNL6 1462 aa28.45■■■□□ 2.14
PLSCR1-208ENST00000472349 WDR62O43379 1518 aa28.42■■■□□ 2.14
PLSCR1-208ENST00000472349 EEA1Q15075 1411 aa28.4■■■□□ 2.14
PLSCR1-208ENST00000472349 POLA1P09884 1462 aaPredicted RBP28.4■■■□□ 2.14
PLSCR1-208ENST00000472349 THOC2Q8NI27 1593 aaKnown RBP28.37■■■□□ 2.13
PLSCR1-208ENST00000472349 SOGA1O94964 1423 aa28.34■■■□□ 2.13
PLSCR1-208ENST00000472349 ABCA10Q8WWZ4 1543 aa28.27■■■□□ 2.12
PLSCR1-208ENST00000472349 KIF27Q86VH2 1401 aa28.24■■■□□ 2.11
PLSCR1-208ENST00000472349 RAD54L2Q9Y4B4 1467 aa28.21■■■□□ 2.11
PLSCR1-208ENST00000472349 RUSC2Q8N2Y8 1516 aa28.2■■■□□ 2.1
PLSCR1-208ENST00000472349 CUX2O14529 1486 aa28.2■■■□□ 2.1
PLSCR1-208ENST00000472349 FAM9AQ8IZU1 332 aaPredicted RBP28.17■■■□□ 2.1
PLSCR1-208ENST00000472349 IFT140Q96RY7 1462 aa28.16■■■□□ 2.1
PLSCR1-208ENST00000472349 TARBP1Q13395 1621 aaKnown RBP28.15■■■□□ 2.1
PLSCR1-208ENST00000472349 CSRNP3Q8WYN3 585 aa28.15■■■□□ 2.1
PLSCR1-208ENST00000472349 WDR97A6NE52 1622 aa28.13■■■□□ 2.09
PLSCR1-208ENST00000472349 ABCA5Q8WWZ7 1642 aa28.02■■■□□ 2.08
PLSCR1-208ENST00000472349 IGF1RP08069 1367 aa28■■■□□ 2.07
PLSCR1-208ENST00000472349 TDRD9Q8NDG6 1382 aaKnown RBP27.99■■■□□ 2.07
PLSCR1-208ENST00000472349 GAPVD1Q14C86 1478 aa27.97■■■□□ 2.07
PLSCR1-208ENST00000472349 PRXQ9BXM0 1461 aa27.97■■■□□ 2.07
PLSCR1-208ENST00000472349 KIF21BO75037 1637 aa27.96■■■□□ 2.07
PLSCR1-208ENST00000472349 ERICH3Q5RHP9 1530 aa27.94■■■□□ 2.06
PLSCR1-208ENST00000472349 LOC105371045A0A1W2PR82 267 aa27.9■■■□□ 2.06
PLSCR1-208ENST00000472349 ZNF608Q9ULD9 1512 aaPredicted RBP27.9■■■□□ 2.06
PLSCR1-208ENST00000472349 GOLGA3Q08378 1498 aa27.89■■■□□ 2.06
PLSCR1-208ENST00000472349 AQRO60306 1485 aaKnown RBP eCLIP27.87■■■□□ 2.053e-7■■■□□ 16
PLSCR1-208ENST00000472349 GRIN2BQ13224 1484 aa27.86■■■□□ 2.05
PLSCR1-208ENST00000472349 CUL7Q14999 1698 aa27.84■■■□□ 2.05
PLSCR1-208ENST00000472349 CARMIL1Q5VZK9 1371 aa27.84■■■□□ 2.05
PLSCR1-208ENST00000472349 EIF4G3O43432 1585 aaKnown RBP27.83■■■□□ 2.05
PLSCR1-208ENST00000472349 RAPGEF2Q9Y4G8 1499 aa27.81■■■□□ 2.04
PLSCR1-208ENST00000472349 TNIKQ9UKE5 1360 aa27.75■■■□□ 2.03
PLSCR1-208ENST00000472349 PBRM1Q86U86 1689 aa27.75■■■□□ 2.03
PLSCR1-208ENST00000472349 FHAD1B1AJZ9 1412 aa27.72■■■□□ 2.03
PLSCR1-208ENST00000472349 MAGI1Q96QZ7 1491 aaPredicted RBP27.7■■■□□ 2.02
PLSCR1-208ENST00000472349 ADAMTS12P58397 1594 aa27.69■■■□□ 2.02
PLSCR1-208ENST00000472349 UBTFP17480 764 aaKnown RBP27.66■■■□□ 2.02
PLSCR1-208ENST00000472349 EHMT2Q96KQ7 1210 aa27.66■■■□□ 2.02
PLSCR1-208ENST00000472349 SNAPC4Q5SXM2 1469 aa27.65■■■□□ 2.02
PLSCR1-208ENST00000472349 SYNJ2O15056 1496 aa27.57■■■□□ 2
PLSCR1-208ENST00000472349 CEP162Q5TB80 1403 aa27.52■■■□□ 2
PLSCR1-208ENST00000472349 GRIN2AQ12879 1464 aa27.5■■□□□ 1.99
PLSCR1-208ENST00000472349 CHMP7Q8WUX9 453 aaPredicted RBP27.43■■□□□ 1.98
PLSCR1-208ENST00000472349 CLIP1P30622 1438 aa27.41■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms