RNA–Protein interactions for RNA: ENST00000472206.1

CTLA4-204, Transcript of cytotoxic T-lymphocyte associated protein 4, humanhuman

TSL 1 (best) BASIC

Gene CTLA4, Length 277 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4-204ENST00000472206 NISCHQ9Y2I1 1504 aa19.78■□□□□ 0.76
CTLA4-204ENST00000472206 CCDC180Q9P1Z9 1646 aa17.41■□□□□ 0.38
CTLA4-204ENST00000472206 ZCCHC6Q5VYS8 1495 aaKnown RBP16.65■□□□□ 0.26
CTLA4-204ENST00000472206 ABCC9O60706 1549 aa16.64■□□□□ 0.25
CTLA4-204ENST00000472206 DCAF1Q9Y4B6 1507 aa16.51■□□□□ 0.23
CTLA4-204ENST00000472206 MYO15BQ96JP2 1530 aa16.37■□□□□ 0.21
CTLA4-204ENST00000472206 DCAF8L2P0C7V8 631 aa16.23■□□□□ 0.19
CTLA4-204ENST00000472206 NACADO15069 1562 aa16.21■□□□□ 0.19
CTLA4-204ENST00000472206 RB1CC1Q8TDY2 1594 aa16.16■□□□□ 0.18
CTLA4-204ENST00000472206 UNC13AQ9UPW8 1703 aa15.95■□□□□ 0.14
CTLA4-204ENST00000472206 SCRIBQ14160 1630 aa15.93■□□□□ 0.14
CTLA4-204ENST00000472206 SHROOM4Q9ULL8 1493 aa15.85■□□□□ 0.13
CTLA4-204ENST00000472206 BICRAQ9NZM4 1560 aa15.72■□□□□ 0.11
CTLA4-204ENST00000472206 AEBP2Q6ZN18 517 aaPredicted RBP15.7■□□□□ 0.1
CTLA4-204ENST00000472206 PABPN1Q86U42 306 aaKnown RBP eCLIP15.57■□□□□ 0.08
CTLA4-204ENST00000472206 DNAJC5BQ9UF47 199 aa15.49■□□□□ 0.07
CTLA4-204ENST00000472206 BAZ1AQ9NRL2 1556 aaPredicted RBP15.36■□□□□ 0.05
CTLA4-204ENST00000472206 CECR2Q9BXF3 1484 aa15.33■□□□□ 0.05
CTLA4-204ENST00000472206 SUPT5HO00267 1087 aaKnown RBP15.28■□□□□ 0.04
CTLA4-204ENST00000472206 RSF1Q96T23 1441 aaPredicted RBP15.27■□□□□ 0.04
CTLA4-204ENST00000472206 SMARCA4P51532 1647 aa15.26■□□□□ 0.03
CTLA4-204ENST00000472206 EIF4G1Q04637 1599 aaKnown RBP15.24■□□□□ 0.03
CTLA4-204ENST00000472206 MROH2BQ7Z745 1585 aa15.24■□□□□ 0.03
CTLA4-204ENST00000472206 WIZO95785 1651 aa15.12■□□□□ 0.01
CTLA4-204ENST00000472206 PEG3Q9GZU2 1588 aa15.12■□□□□ 0.01
CTLA4-204ENST00000472206 CC2D2AQ9P2K1 1620 aa15.1■□□□□ 0.01
CTLA4-204ENST00000472206 CHIC1Q5VXU3 224 aa15.09■□□□□ 0.01
CTLA4-204ENST00000472206 DNAJC5Q9H3Z4 198 aa15.07■□□□□ 0
CTLA4-204ENST00000472206 SMARCA2P51531 1590 aa15.07■□□□□ 0
CTLA4-204ENST00000472206 TOP2AP11388 1531 aaKnown RBP15.04■□□□□ -0
CTLA4-204ENST00000472206 ATAD2BQ9ULI0 1458 aa15.02■□□□□ -0
CTLA4-204ENST00000472206 HMGXB3Q12766 1538 aa14.94□□□□□ -0.02
CTLA4-204ENST00000472206 NCAPD3P42695 1498 aa14.94□□□□□ -0.02
CTLA4-204ENST00000472206 BAZ1BQ9UIG0 1483 aaKnown RBP14.92□□□□□ -0.02
CTLA4-204ENST00000472206 CCDC88BA6NC98 1476 aa14.76□□□□□ -0.05
CTLA4-204ENST00000472206 PRDM2Q13029 1718 aa14.58□□□□□ -0.07
CTLA4-204ENST00000472206 NESP48681 1621 aa14.53□□□□□ -0.08
CTLA4-204ENST00000472206 CFTRP13569 1480 aa14.53□□□□□ -0.08
CTLA4-204ENST00000472206 LAMC3Q9Y6N6 1575 aa14.52□□□□□ -0.08
CTLA4-204ENST00000472206 CADPSQ9ULU8 1353 aa14.5□□□□□ -0.09
CTLA4-204ENST00000472206 TRIM41Q8WV44 630 aa14.49□□□□□ -0.09
CTLA4-204ENST00000472206 WRNQ14191 1432 aaPredicted RBP eCLIP14.44□□□□□ -0.1
CTLA4-204ENST00000472206 KIF21AQ7Z4S6 1674 aa14.44□□□□□ -0.1
CTLA4-204ENST00000472206 ABCC8Q09428 1581 aa14.39□□□□□ -0.11
CTLA4-204ENST00000472206 EEA1Q15075 1411 aa14.38□□□□□ -0.11
CTLA4-204ENST00000472206 FANCD2Q9BXW9 1451 aa14.38□□□□□ -0.11
CTLA4-204ENST00000472206 TOP2BQ02880 1626 aa14.36□□□□□ -0.11
CTLA4-204ENST00000472206 BIVM-ERCC5R4GMW8 1640 aa14.36□□□□□ -0.11
CTLA4-204ENST00000472206 PDS5BQ9NTI5 1447 aa14.34□□□□□ -0.11
CTLA4-204ENST00000472206 CEP164Q9UPV0 1460 aa14.32□□□□□ -0.12
CTLA4-204ENST00000472206 SYNJ1O43426 1573 aa14.3□□□□□ -0.12
CTLA4-204ENST00000472206 CUX1P39880 1505 aa14.27□□□□□ -0.12
CTLA4-204ENST00000472206 THOC2Q8NI27 1593 aaKnown RBP14.26□□□□□ -0.13
CTLA4-204ENST00000472206 ERCC6Q03468 1493 aa14.26□□□□□ -0.13
CTLA4-204ENST00000472206 URB2Q14146 1524 aaKnown RBP14.25□□□□□ -0.13
CTLA4-204ENST00000472206 DNMBPQ6XZF7 1577 aa14.24□□□□□ -0.13
CTLA4-204ENST00000472206 MRC2Q9UBG0 1479 aa14.23□□□□□ -0.13
CTLA4-204ENST00000472206 TOPBP1Q92547 1522 aa14.21□□□□□ -0.13
CTLA4-204ENST00000472206 WDR62O43379 1518 aa14.2□□□□□ -0.14
CTLA4-204ENST00000472206 FGD5Q6ZNL6 1462 aa14.13□□□□□ -0.15
CTLA4-204ENST00000472206 KIF27Q86VH2 1401 aa14.12□□□□□ -0.15
CTLA4-204ENST00000472206 POLA1P09884 1462 aaPredicted RBP14.11□□□□□ -0.15
CTLA4-204ENST00000472206 SOGA1O94964 1423 aa14.1□□□□□ -0.15
CTLA4-204ENST00000472206 KIF21BO75037 1637 aa14.1□□□□□ -0.15
CTLA4-204ENST00000472206 WDR97A6NE52 1622 aa14.09□□□□□ -0.15
CTLA4-204ENST00000472206 CSRNP3Q8WYN3 585 aa14.08□□□□□ -0.16
CTLA4-204ENST00000472206 TARBP1Q13395 1621 aaKnown RBP14.08□□□□□ -0.16
CTLA4-204ENST00000472206 GOLGA3Q08378 1498 aa14.07□□□□□ -0.16
CTLA4-204ENST00000472206 CUX2O14529 1486 aa14.06□□□□□ -0.16
CTLA4-204ENST00000472206 RAD54L2Q9Y4B4 1467 aa14.06□□□□□ -0.16
CTLA4-204ENST00000472206 ABCA10Q8WWZ4 1543 aa14.05□□□□□ -0.16
CTLA4-204ENST00000472206 ERICH3Q5RHP9 1530 aa14.05□□□□□ -0.16
CTLA4-204ENST00000472206 FAM9AQ8IZU1 332 aaPredicted RBP14.04□□□□□ -0.16
CTLA4-204ENST00000472206 TNIKQ9UKE5 1360 aa13.99□□□□□ -0.17
CTLA4-204ENST00000472206 RUSC2Q8N2Y8 1516 aa13.99□□□□□ -0.17
CTLA4-204ENST00000472206 IFT140Q96RY7 1462 aa13.99□□□□□ -0.17
CTLA4-204ENST00000472206 PRXQ9BXM0 1461 aa13.98□□□□□ -0.17
CTLA4-204ENST00000472206 ABCA5Q8WWZ7 1642 aa13.97□□□□□ -0.17
CTLA4-204ENST00000472206 CUL7Q14999 1698 aa13.96□□□□□ -0.17
CTLA4-204ENST00000472206 LOC105371045A0A1W2PR82 267 aa13.96□□□□□ -0.17
CTLA4-204ENST00000472206 EIF4G3O43432 1585 aaKnown RBP13.95□□□□□ -0.18
CTLA4-204ENST00000472206 ZNF608Q9ULD9 1512 aaPredicted RBP13.95□□□□□ -0.18
CTLA4-204ENST00000472206 PBRM1Q86U86 1689 aa13.94□□□□□ -0.18
CTLA4-204ENST00000472206 TDRD9Q8NDG6 1382 aaKnown RBP13.9□□□□□ -0.18
CTLA4-204ENST00000472206 AQRO60306 1485 aaKnown RBP eCLIP13.88□□□□□ -0.19
CTLA4-204ENST00000472206 GAPVD1Q14C86 1478 aa13.88□□□□□ -0.19
CTLA4-204ENST00000472206 RAPGEF2Q9Y4G8 1499 aa13.88□□□□□ -0.19
CTLA4-204ENST00000472206 IGF1RP08069 1367 aa13.88□□□□□ -0.19
CTLA4-204ENST00000472206 CEP162Q5TB80 1403 aa13.87□□□□□ -0.19
CTLA4-204ENST00000472206 UBTFP17480 764 aaKnown RBP13.86□□□□□ -0.19
CTLA4-204ENST00000472206 CARMIL1Q5VZK9 1371 aa13.85□□□□□ -0.19
CTLA4-204ENST00000472206 GRIN2BQ13224 1484 aa13.82□□□□□ -0.2
CTLA4-204ENST00000472206 ADAMTS12P58397 1594 aa13.8□□□□□ -0.2
CTLA4-204ENST00000472206 SNAPC4Q5SXM2 1469 aa13.79□□□□□ -0.2
CTLA4-204ENST00000472206 CLIP1P30622 1438 aa13.78□□□□□ -0.2
CTLA4-204ENST00000472206 FHAD1B1AJZ9 1412 aa13.77□□□□□ -0.21
CTLA4-204ENST00000472206 MAGI1Q96QZ7 1491 aaPredicted RBP13.74□□□□□ -0.21
CTLA4-204ENST00000472206 CHD1O14646 1710 aa13.74□□□□□ -0.21
CTLA4-204ENST00000472206 CTTNBP2Q8WZ74 1663 aa13.74□□□□□ -0.21
CTLA4-204ENST00000472206 EHMT2Q96KQ7 1210 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms