RNA–Protein interactions for RNA: ENST00000472179.2

POLR1D-205, Transcript of RNA polymerase I and III subunit D, humanhuman

TSL 2

Gene POLR1D, Length 1,021 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1D-205ENST00000472179 NISCHQ9Y2I1 1504 aa39.54■■■■□ 3.92
POLR1D-205ENST00000472179 AEBP2Q6ZN18 517 aaPredicted RBP39.02■■■■□ 3.84
POLR1D-205ENST00000472179 CHIC1Q5VXU3 224 aa37.29■■■■□ 3.56
POLR1D-205ENST00000472179 CCDC180Q9P1Z9 1646 aa35.14■■■■□ 3.22
POLR1D-205ENST00000472179 ABCC9O60706 1549 aa34.22■■■■□ 3.07
POLR1D-205ENST00000472179 SENP3Q9H4L4 574 aaPredicted RBP32.99■■■□□ 2.87
POLR1D-205ENST00000472179 ZCCHC6Q5VYS8 1495 aaKnown RBP32.99■■■□□ 2.87
POLR1D-205ENST00000472179 NACADO15069 1562 aa32.97■■■□□ 2.87
POLR1D-205ENST00000472179 RB1CC1Q8TDY2 1594 aa32.96■■■□□ 2.87
POLR1D-205ENST00000472179 MYO15BQ96JP2 1530 aa32.86■■■□□ 2.85
POLR1D-205ENST00000472179 PHF23Q9BUL5 403 aaPredicted RBP32.85■■■□□ 2.85
POLR1D-205ENST00000472179 DCAF8L2P0C7V8 631 aa32.78■■■□□ 2.84
POLR1D-205ENST00000472179 DCAF1Q9Y4B6 1507 aa32.75■■■□□ 2.83
POLR1D-205ENST00000472179 UNC13AQ9UPW8 1703 aa32.37■■■□□ 2.77
POLR1D-205ENST00000472179 BICRAQ9NZM4 1560 aa32.08■■■□□ 2.73
POLR1D-205ENST00000472179 SCRIBQ14160 1630 aa32.03■■■□□ 2.72
POLR1D-205ENST00000472179 PABPN1Q86U42 306 aaKnown RBP eCLIP31.95■■■□□ 2.71
POLR1D-205ENST00000472179 SHROOM4Q9ULL8 1493 aa31.67■■■□□ 2.66
POLR1D-205ENST00000472179 DNAJC5BQ9UF47 199 aa31.38■■■□□ 2.61
POLR1D-205ENST00000472179 EIF4G1Q04637 1599 aaKnown RBP31.16■■■□□ 2.58
POLR1D-205ENST00000472179 CC2D2AQ9P2K1 1620 aa31.01■■■□□ 2.55
POLR1D-205ENST00000472179 FOXD1Q16676 465 aa30.86■■■□□ 2.53
POLR1D-205ENST00000472179 CECR2Q9BXF3 1484 aa30.81■■■□□ 2.52
POLR1D-205ENST00000472179 SMARCA4P51532 1647 aa30.68■■■□□ 2.5
POLR1D-205ENST00000472179 BAZ1AQ9NRL2 1556 aaPredicted RBP30.61■■■□□ 2.49
POLR1D-205ENST00000472179 MROH2BQ7Z745 1585 aa30.49■■■□□ 2.47
POLR1D-205ENST00000472179 ATAD2BQ9ULI0 1458 aa30.47■■■□□ 2.47
POLR1D-205ENST00000472179 NCAPD3P42695 1498 aa30.44■■■□□ 2.46
POLR1D-205ENST00000472179 PEG3Q9GZU2 1588 aa30.41■■■□□ 2.46
POLR1D-205ENST00000472179 SMARCA2P51531 1590 aa30.41■■■□□ 2.46
POLR1D-205ENST00000472179 HMGXB3Q12766 1538 aa30.32■■■□□ 2.44
POLR1D-205ENST00000472179 BAZ1BQ9UIG0 1483 aaKnown RBP30.18■■■□□ 2.42
POLR1D-205ENST00000472179 WIZO95785 1651 aa30.17■■■□□ 2.42
POLR1D-205ENST00000472179 RSF1Q96T23 1441 aaPredicted RBP30.15■■■□□ 2.42
POLR1D-205ENST00000472179 PLPPR3Q6T4P5 718 aa29.87■■■□□ 2.37
POLR1D-205ENST00000472179 TOP2AP11388 1531 aaKnown RBP29.83■■■□□ 2.37
POLR1D-205ENST00000472179 NESP48681 1621 aa29.68■■■□□ 2.34
POLR1D-205ENST00000472179 LAMC3Q9Y6N6 1575 aa29.61■■■□□ 2.33
POLR1D-205ENST00000472179 CADPSQ9ULU8 1353 aa29.51■■■□□ 2.31
POLR1D-205ENST00000472179 CCDC88BA6NC98 1476 aa29.47■■■□□ 2.31
POLR1D-205ENST00000472179 ERCC6Q03468 1493 aa29.42■■■□□ 2.3
POLR1D-205ENST00000472179 CFTRP13569 1480 aa29.4■■■□□ 2.3
POLR1D-205ENST00000472179 KIF21AQ7Z4S6 1674 aa29.37■■■□□ 2.29
POLR1D-205ENST00000472179 PDS5BQ9NTI5 1447 aa29.34■■■□□ 2.29
POLR1D-205ENST00000472179 SUPT5HO00267 1087 aaKnown RBP29.3■■■□□ 2.28
POLR1D-205ENST00000472179 THOC2Q8NI27 1593 aaKnown RBP29.27■■■□□ 2.28
POLR1D-205ENST00000472179 PRDM2Q13029 1718 aa29.25■■■□□ 2.27
POLR1D-205ENST00000472179 PPP6R1Q9UPN7 881 aa29.24■■■□□ 2.27
POLR1D-205ENST00000472179 FANCD2Q9BXW9 1451 aa29.18■■■□□ 2.26
POLR1D-205ENST00000472179 CUX2O14529 1486 aa29.15■■■□□ 2.26
POLR1D-205ENST00000472179 CEP164Q9UPV0 1460 aa29.12■■■□□ 2.25
POLR1D-205ENST00000472179 ADRA2BP18089 450 aa29.12■■■□□ 2.25
POLR1D-205ENST00000472179 MRC2Q9UBG0 1479 aa29.08■■■□□ 2.25
POLR1D-205ENST00000472179 WDR62O43379 1518 aa29.04■■■□□ 2.24
POLR1D-205ENST00000472179 URB2Q14146 1524 aaKnown RBP28.94■■■□□ 2.22
POLR1D-205ENST00000472179 PIAS4Q8N2W9 510 aaPredicted RBP28.83■■■□□ 2.21
POLR1D-205ENST00000472179 TOPBP1Q92547 1522 aa28.75■■■□□ 2.19
POLR1D-205ENST00000472179 DNMBPQ6XZF7 1577 aa28.73■■■□□ 2.19
POLR1D-205ENST00000472179 ABCC8Q09428 1581 aa28.69■■■□□ 2.18
POLR1D-205ENST00000472179 CUX1P39880 1505 aa28.6■■■□□ 2.17
POLR1D-205ENST00000472179 MSH5O43196 834 aa28.54■■■□□ 2.16
POLR1D-205ENST00000472179 POLA1P09884 1462 aaPredicted RBP28.52■■■□□ 2.16
POLR1D-205ENST00000472179 IFT140Q96RY7 1462 aa28.51■■■□□ 2.15
POLR1D-205ENST00000472179 TARBP1Q13395 1621 aaKnown RBP28.48■■■□□ 2.15
POLR1D-205ENST00000472179 FGD5Q6ZNL6 1462 aa28.45■■■□□ 2.14
POLR1D-205ENST00000472179 ZNF608Q9ULD9 1512 aaPredicted RBP28.43■■■□□ 2.14
POLR1D-205ENST00000472179 BIVM-ERCC5R4GMW8 1640 aa28.39■■■□□ 2.13
POLR1D-205ENST00000472179 SYNJ1O43426 1573 aa28.38■■■□□ 2.13
POLR1D-205ENST00000472179 WRNQ14191 1432 aaPredicted RBP eCLIP28.38■■■□□ 2.13
POLR1D-205ENST00000472179 RAD54L2Q9Y4B4 1467 aa28.38■■■□□ 2.13
POLR1D-205ENST00000472179 TOP2BQ02880 1626 aa28.36■■■□□ 2.13
POLR1D-205ENST00000472179 SOGA1O94964 1423 aa28.34■■■□□ 2.13
POLR1D-205ENST00000472179 EIF4G3O43432 1585 aaKnown RBP28.33■■■□□ 2.12
POLR1D-205ENST00000472179 WDR97A6NE52 1622 aa28.3■■■□□ 2.12
POLR1D-205ENST00000472179 AQRO60306 1485 aaKnown RBP eCLIP28.23■■■□□ 2.11
POLR1D-205ENST00000472179 ABCA10Q8WWZ4 1543 aa28.19■■■□□ 2.1
POLR1D-205ENST00000472179 TDRD9Q8NDG6 1382 aaKnown RBP28.17■■■□□ 2.1
POLR1D-205ENST00000472179 DNAJC5Q9H3Z4 198 aa28.12■■■□□ 2.09
POLR1D-205ENST00000472179 ABCA5Q8WWZ7 1642 aa28.11■■■□□ 2.09
POLR1D-205ENST00000472179 PBRM1Q86U86 1689 aa28.04■■■□□ 2.08
POLR1D-205ENST00000472179 GAPVD1Q14C86 1478 aa28.04■■■□□ 2.08
POLR1D-205ENST00000472179 GRIN2BQ13224 1484 aa28.02■■■□□ 2.08
POLR1D-205ENST00000472179 SNAPC4Q5SXM2 1469 aa27.98■■■□□ 2.07
POLR1D-205ENST00000472179 CHD1O14646 1710 aa27.97■■■□□ 2.07
POLR1D-205ENST00000472179 MAGI1Q96QZ7 1491 aaPredicted RBP27.95■■■□□ 2.06
POLR1D-205ENST00000472179 OSCARQ8IYS5 282 aa27.87■■■□□ 2.05
POLR1D-205ENST00000472179 ERICH3Q5RHP9 1530 aa27.85■■■□□ 2.05
POLR1D-205ENST00000472179 SYNJ2O15056 1496 aa27.83■■■□□ 2.05
POLR1D-205ENST00000472179 ADAMTS12P58397 1594 aa27.82■■■□□ 2.04
POLR1D-205ENST00000472179 KIF27Q86VH2 1401 aa27.75■■■□□ 2.03
POLR1D-205ENST00000472179 FBLN2P98095 1184 aa27.73■■■□□ 2.03
POLR1D-205ENST00000472179 FHAD1B1AJZ9 1412 aa27.71■■■□□ 2.03
POLR1D-205ENST00000472179 CHMP7Q8WUX9 453 aaPredicted RBP27.71■■■□□ 2.03
POLR1D-205ENST00000472179 GRIN2AQ12879 1464 aa27.69■■■□□ 2.02
POLR1D-205ENST00000472179 CLASP1Q7Z460 1538 aa27.68■■■□□ 2.02
POLR1D-205ENST00000472179 IGF1RP08069 1367 aa27.67■■■□□ 2.02
POLR1D-205ENST00000472179 TRIM41Q8WV44 630 aa27.66■■■□□ 2.02
POLR1D-205ENST00000472179 CUL7Q14999 1698 aa27.62■■■□□ 2.01
POLR1D-205ENST00000472179 RUSC2Q8N2Y8 1516 aa27.62■■■□□ 2.01
POLR1D-205ENST00000472179 NUP160Q12769 1436 aa27.59■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 155.7 ms