RNA–Protein interactions for RNA: ENST00000472081.1

CEACAM4-202, Transcript of carcinoembryonic antigen related cell adhesion molecule 4, humanhuman

TSL 2

Gene CEACAM4, Length 569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM4-202ENST00000472081 NISCHQ9Y2I1 1504 aa32.11■■■□□ 2.73
CEACAM4-202ENST00000472081 CCDC180Q9P1Z9 1646 aa28.21■■■□□ 2.11
CEACAM4-202ENST00000472081 ABCC9O60706 1549 aa27.39■■□□□ 1.98
CEACAM4-202ENST00000472081 DCAF8L2P0C7V8 631 aa26.89■■□□□ 1.9
CEACAM4-202ENST00000472081 ZCCHC6Q5VYS8 1495 aaKnown RBP26.8■■□□□ 1.88
CEACAM4-202ENST00000472081 DCAF1Q9Y4B6 1507 aa26.55■■□□□ 1.84
CEACAM4-202ENST00000472081 NACADO15069 1562 aa26.54■■□□□ 1.84
CEACAM4-202ENST00000472081 MYO15BQ96JP2 1530 aa26.5■■□□□ 1.83
CEACAM4-202ENST00000472081 RB1CC1Q8TDY2 1594 aa26.46■■□□□ 1.83
CEACAM4-202ENST00000472081 SCRIBQ14160 1630 aa25.87■■□□□ 1.73
CEACAM4-202ENST00000472081 PABPN1Q86U42 306 aaKnown RBP eCLIP25.78■■□□□ 1.72
CEACAM4-202ENST00000472081 SHROOM4Q9ULL8 1493 aa25.74■■□□□ 1.71
CEACAM4-202ENST00000472081 UNC13AQ9UPW8 1703 aa25.68■■□□□ 1.7
CEACAM4-202ENST00000472081 BICRAQ9NZM4 1560 aa25.61■■□□□ 1.69
CEACAM4-202ENST00000472081 CECR2Q9BXF3 1484 aa25■■□□□ 1.59
CEACAM4-202ENST00000472081 EIF4G1Q04637 1599 aaKnown RBP24.93■■□□□ 1.58
CEACAM4-202ENST00000472081 DNAJC5BQ9UF47 199 aa24.84■■□□□ 1.57
CEACAM4-202ENST00000472081 BAZ1AQ9NRL2 1556 aaPredicted RBP24.84■■□□□ 1.57
CEACAM4-202ENST00000472081 MROH2BQ7Z745 1585 aa24.76■■□□□ 1.55
CEACAM4-202ENST00000472081 SMARCA4P51532 1647 aa24.75■■□□□ 1.55
CEACAM4-202ENST00000472081 CC2D2AQ9P2K1 1620 aa24.71■■□□□ 1.55
CEACAM4-202ENST00000472081 RSF1Q96T23 1441 aaPredicted RBP24.68■■□□□ 1.54
CEACAM4-202ENST00000472081 ATAD2BQ9ULI0 1458 aa24.61■■□□□ 1.53
CEACAM4-202ENST00000472081 SMARCA2P51531 1590 aa24.56■■□□□ 1.52
CEACAM4-202ENST00000472081 NCAPD3P42695 1498 aa24.54■■□□□ 1.52
CEACAM4-202ENST00000472081 SUPT5HO00267 1087 aaKnown RBP24.51■■□□□ 1.51
CEACAM4-202ENST00000472081 PEG3Q9GZU2 1588 aa24.5■■□□□ 1.51
CEACAM4-202ENST00000472081 WIZO95785 1651 aa24.45■■□□□ 1.5
CEACAM4-202ENST00000472081 BAZ1BQ9UIG0 1483 aaKnown RBP24.43■■□□□ 1.5
CEACAM4-202ENST00000472081 HMGXB3Q12766 1538 aa24.37■■□□□ 1.49
CEACAM4-202ENST00000472081 TOP2AP11388 1531 aaKnown RBP24.24■■□□□ 1.47
CEACAM4-202ENST00000472081 CCDC88BA6NC98 1476 aa24.03■■□□□ 1.44
CEACAM4-202ENST00000472081 CADPSQ9ULU8 1353 aa23.9■■□□□ 1.42
CEACAM4-202ENST00000472081 NESP48681 1621 aa23.8■■□□□ 1.4
CEACAM4-202ENST00000472081 CFTRP13569 1480 aa23.79■■□□□ 1.4
CEACAM4-202ENST00000472081 LAMC3Q9Y6N6 1575 aa23.75■■□□□ 1.39
CEACAM4-202ENST00000472081 PDS5BQ9NTI5 1447 aa23.69■■□□□ 1.38
CEACAM4-202ENST00000472081 ERCC6Q03468 1493 aa23.59■■□□□ 1.37
CEACAM4-202ENST00000472081 FANCD2Q9BXW9 1451 aa23.57■■□□□ 1.36
CEACAM4-202ENST00000472081 CEP164Q9UPV0 1460 aa23.49■■□□□ 1.35
CEACAM4-202ENST00000472081 KIF21AQ7Z4S6 1674 aa23.39■■□□□ 1.34
CEACAM4-202ENST00000472081 PRDM2Q13029 1718 aa23.39■■□□□ 1.33
CEACAM4-202ENST00000472081 MRC2Q9UBG0 1479 aa23.36■■□□□ 1.33
CEACAM4-202ENST00000472081 URB2Q14146 1524 aaKnown RBP23.28■■□□□ 1.32
CEACAM4-202ENST00000472081 ABCC8Q09428 1581 aa23.27■■□□□ 1.32
CEACAM4-202ENST00000472081 WRNQ14191 1432 aaPredicted RBP eCLIP23.25■■□□□ 1.31
CEACAM4-202ENST00000472081 THOC2Q8NI27 1593 aaKnown RBP23.23■■□□□ 1.31
CEACAM4-202ENST00000472081 TOPBP1Q92547 1522 aa23.22■■□□□ 1.31
CEACAM4-202ENST00000472081 WDR62O43379 1518 aa23.21■■□□□ 1.31
CEACAM4-202ENST00000472081 DNMBPQ6XZF7 1577 aa23.18■■□□□ 1.3
CEACAM4-202ENST00000472081 CUX1P39880 1505 aa23.18■■□□□ 1.3
CEACAM4-202ENST00000472081 CUX2O14529 1486 aa23.13■■□□□ 1.29
CEACAM4-202ENST00000472081 TRIM41Q8WV44 630 aa23.13■■□□□ 1.29
CEACAM4-202ENST00000472081 CHIC1Q5VXU3 224 aa23.09■■□□□ 1.29
CEACAM4-202ENST00000472081 SYNJ1O43426 1573 aa23.08■■□□□ 1.29
CEACAM4-202ENST00000472081 FGD5Q6ZNL6 1462 aa23.06■■□□□ 1.28
CEACAM4-202ENST00000472081 TOP2BQ02880 1626 aa23.06■■□□□ 1.28
CEACAM4-202ENST00000472081 SOGA1O94964 1423 aa23.05■■□□□ 1.28
CEACAM4-202ENST00000472081 POLA1P09884 1462 aaPredicted RBP23.05■■□□□ 1.28
CEACAM4-202ENST00000472081 BIVM-ERCC5R4GMW8 1640 aa23■■□□□ 1.27
CEACAM4-202ENST00000472081 IFT140Q96RY7 1462 aa22.99■■□□□ 1.27
CEACAM4-202ENST00000472081 RAD54L2Q9Y4B4 1467 aa22.98■■□□□ 1.27
CEACAM4-202ENST00000472081 TDRD9Q8NDG6 1382 aaKnown RBP22.89■■□□□ 1.25
CEACAM4-202ENST00000472081 TARBP1Q13395 1621 aaKnown RBP22.86■■□□□ 1.25
CEACAM4-202ENST00000472081 ABCA10Q8WWZ4 1543 aa22.85■■□□□ 1.25
CEACAM4-202ENST00000472081 ZNF608Q9ULD9 1512 aaPredicted RBP22.84■■□□□ 1.25
CEACAM4-202ENST00000472081 AQRO60306 1485 aaKnown RBP eCLIP22.82■■□□□ 1.24
CEACAM4-202ENST00000472081 KIF27Q86VH2 1401 aa22.75■■□□□ 1.23
CEACAM4-202ENST00000472081 GAPVD1Q14C86 1478 aa22.74■■□□□ 1.23
CEACAM4-202ENST00000472081 WDR97A6NE52 1622 aa22.68■■□□□ 1.22
CEACAM4-202ENST00000472081 GRIN2BQ13224 1484 aa22.68■■□□□ 1.22
CEACAM4-202ENST00000472081 EIF4G3O43432 1585 aaKnown RBP22.67■■□□□ 1.22
CEACAM4-202ENST00000472081 RUSC2Q8N2Y8 1516 aa22.66■■□□□ 1.22
CEACAM4-202ENST00000472081 FAM9AQ8IZU1 332 aaPredicted RBP22.65■■□□□ 1.22
CEACAM4-202ENST00000472081 IGF1RP08069 1367 aa22.64■■□□□ 1.22
CEACAM4-202ENST00000472081 ABCA5Q8WWZ7 1642 aa22.63■■□□□ 1.21
CEACAM4-202ENST00000472081 CSRNP3Q8WYN3 585 aa22.6■■□□□ 1.21
CEACAM4-202ENST00000472081 EEA1Q15075 1411 aa22.58■■□□□ 1.21
CEACAM4-202ENST00000472081 ERICH3Q5RHP9 1530 aa22.57■■□□□ 1.2
CEACAM4-202ENST00000472081 FBLN2P98095 1184 aa22.57■■□□□ 1.2
CEACAM4-202ENST00000472081 SNAPC4Q5SXM2 1469 aa22.56■■□□□ 1.2
CEACAM4-202ENST00000472081 CHMP7Q8WUX9 453 aaPredicted RBP22.56■■□□□ 1.2
CEACAM4-202ENST00000472081 MAGI1Q96QZ7 1491 aaPredicted RBP22.54■■□□□ 1.2
CEACAM4-202ENST00000472081 CARMIL1Q5VZK9 1371 aa22.52■■□□□ 1.2
CEACAM4-202ENST00000472081 FHAD1B1AJZ9 1412 aa22.5■■□□□ 1.19
CEACAM4-202ENST00000472081 PBRM1Q86U86 1689 aa22.49■■□□□ 1.19
CEACAM4-202ENST00000472081 SYNJ2O15056 1496 aa22.47■■□□□ 1.19
CEACAM4-202ENST00000472081 OSCARQ8IYS5 282 aa22.41■■□□□ 1.18
CEACAM4-202ENST00000472081 ADAMTS12P58397 1594 aa22.4■■□□□ 1.18
CEACAM4-202ENST00000472081 PRXQ9BXM0 1461 aa22.39■■□□□ 1.17
CEACAM4-202ENST00000472081 CUL7Q14999 1698 aa22.39■■□□□ 1.17
CEACAM4-202ENST00000472081 RAPGEF2Q9Y4G8 1499 aa22.38■■□□□ 1.17
CEACAM4-202ENST00000472081 GRIN2AQ12879 1464 aa22.35■■□□□ 1.17
CEACAM4-202ENST00000472081 EHMT2Q96KQ7 1210 aa22.33■■□□□ 1.17
CEACAM4-202ENST00000472081 UBTFP17480 764 aaKnown RBP22.26■■□□□ 1.15
CEACAM4-202ENST00000472081 CHD1O14646 1710 aa22.26■■□□□ 1.15
CEACAM4-202ENST00000472081 NUP160Q12769 1436 aa22.24■■□□□ 1.15
CEACAM4-202ENST00000472081 KIF21BO75037 1637 aa22.21■■□□□ 1.15
CEACAM4-202ENST00000472081 GOLGA3Q08378 1498 aa22.2■■□□□ 1.14
CEACAM4-202ENST00000472081 LOC105371045A0A1W2PR82 267 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms