RNA–Protein interactions for RNA: ENST00000472038.1

RCSD1-204, Transcript of RCSD domain containing 1, humanhuman

TSL 2

Gene RCSD1, Length 1,719 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCSD1-204ENST00000472038 NISCHQ9Y2I1 1504 aa40.58■■■■■ 4.09
RCSD1-204ENST00000472038 CCDC180Q9P1Z9 1646 aa35■■■■□ 3.19
RCSD1-204ENST00000472038 ZCCHC6Q5VYS8 1495 aaKnown RBP34.25■■■■□ 3.07
RCSD1-204ENST00000472038 DCAF1Q9Y4B6 1507 aa33.62■■■□□ 2.97
RCSD1-204ENST00000472038 SHROOM4Q9ULL8 1493 aa33.56■■■□□ 2.96
RCSD1-204ENST00000472038 DCAF8L2P0C7V8 631 aa33.25■■■□□ 2.91
RCSD1-204ENST00000472038 MYO15BQ96JP2 1530 aa32.95■■■□□ 2.87
RCSD1-204ENST00000472038 SUPT5HO00267 1087 aaKnown RBP32.73■■■□□ 2.83
RCSD1-204ENST00000472038 NACADO15069 1562 aa32.48■■■□□ 2.79
RCSD1-204ENST00000472038 ABCC9O60706 1549 aa32.4■■■□□ 2.78
RCSD1-204ENST00000472038 SCRIBQ14160 1630 aa32.26■■■□□ 2.75
RCSD1-204ENST00000472038 RB1CC1Q8TDY2 1594 aa31.99■■■□□ 2.71
RCSD1-204ENST00000472038 RSF1Q96T23 1441 aaPredicted RBP31.78■■■□□ 2.68
RCSD1-204ENST00000472038 CHIC1Q5VXU3 224 aa31.76■■■□□ 2.67
RCSD1-204ENST00000472038 CECR2Q9BXF3 1484 aa31.43■■■□□ 2.62
RCSD1-204ENST00000472038 MROH2BQ7Z745 1585 aa31.34■■■□□ 2.61
RCSD1-204ENST00000472038 BAZ1AQ9NRL2 1556 aaPredicted RBP31.29■■■□□ 2.6
RCSD1-204ENST00000472038 UNC13AQ9UPW8 1703 aa31.24■■■□□ 2.59
RCSD1-204ENST00000472038 WIZO95785 1651 aa31.09■■■□□ 2.57
RCSD1-204ENST00000472038 SMARCA4P51532 1647 aa31■■■□□ 2.55
RCSD1-204ENST00000472038 BICRAQ9NZM4 1560 aa30.95■■■□□ 2.55
RCSD1-204ENST00000472038 TOP2AP11388 1531 aaKnown RBP30.86■■■□□ 2.53
RCSD1-204ENST00000472038 TRIM41Q8WV44 630 aa30.78■■■□□ 2.52
RCSD1-204ENST00000472038 PABPN1Q86U42 306 aaKnown RBP eCLIP30.73■■■□□ 2.51
RCSD1-204ENST00000472038 PEG3Q9GZU2 1588 aa30.64■■■□□ 2.5
RCSD1-204ENST00000472038 EIF4G1Q04637 1599 aaKnown RBP30.6■■■□□ 2.49
RCSD1-204ENST00000472038 SMARCA2P51531 1590 aa30.57■■■□□ 2.48
RCSD1-204ENST00000472038 CCDC88BA6NC98 1476 aa30.55■■■□□ 2.48
RCSD1-204ENST00000472038 LOC105371045A0A1W2PR82 267 aa30.53■■■□□ 2.48
RCSD1-204ENST00000472038 ATAD2BQ9ULI0 1458 aa30.34■■■□□ 2.45
RCSD1-204ENST00000472038 BAZ1BQ9UIG0 1483 aaKnown RBP30.21■■■□□ 2.43
RCSD1-204ENST00000472038 FAM9AQ8IZU1 332 aaPredicted RBP30.16■■■□□ 2.42
RCSD1-204ENST00000472038 ABCC8Q09428 1581 aa30.08■■■□□ 2.41
RCSD1-204ENST00000472038 NCAPD3P42695 1498 aa29.98■■■□□ 2.39
RCSD1-204ENST00000472038 PCGF6Q9BYE7 350 aa29.98■■■□□ 2.39
RCSD1-204ENST00000472038 HMGXB3Q12766 1538 aa29.98■■■□□ 2.39
RCSD1-204ENST00000472038 EEA1Q15075 1411 aa29.96■■■□□ 2.39
RCSD1-204ENST00000472038 WRNQ14191 1432 aaPredicted RBP eCLIP29.91■■■□□ 2.38
RCSD1-204ENST00000472038 TRIM26Q12899 539 aaPredicted RBP29.86■■■□□ 2.37
RCSD1-204ENST00000472038 HRCP23327 699 aa29.79■■■□□ 2.36
RCSD1-204ENST00000472038 SOGA1O94964 1423 aa29.73■■■□□ 2.35
RCSD1-204ENST00000472038 SYNJ1O43426 1573 aa29.68■■■□□ 2.34
RCSD1-204ENST00000472038 CSRNP3Q8WYN3 585 aa29.68■■■□□ 2.34
RCSD1-204ENST00000472038 EHMT2Q96KQ7 1210 aa29.63■■■□□ 2.33
RCSD1-204ENST00000472038 TNIKQ9UKE5 1360 aa29.59■■■□□ 2.33
RCSD1-204ENST00000472038 TOP2BQ02880 1626 aa29.55■■■□□ 2.32
RCSD1-204ENST00000472038 RUSC2Q8N2Y8 1516 aa29.53■■■□□ 2.32
RCSD1-204ENST00000472038 CFTRP13569 1480 aa29.52■■■□□ 2.32
RCSD1-204ENST00000472038 GOLGA3Q08378 1498 aa29.52■■■□□ 2.32
RCSD1-204ENST00000472038 BIVM-ERCC5R4GMW8 1640 aa29.48■■■□□ 2.31
RCSD1-204ENST00000472038 CEP162Q5TB80 1403 aa29.45■■■□□ 2.3
RCSD1-204ENST00000472038 CEP164Q9UPV0 1460 aa29.45■■■□□ 2.3
RCSD1-204ENST00000472038 KIF21BO75037 1637 aa29.44■■■□□ 2.3
RCSD1-204ENST00000472038 UBTFP17480 764 aaKnown RBP29.34■■■□□ 2.29
RCSD1-204ENST00000472038 CC2D2AQ9P2K1 1620 aa29.34■■■□□ 2.29
RCSD1-204ENST00000472038 PRDM2Q13029 1718 aa29.32■■■□□ 2.28
RCSD1-204ENST00000472038 CADPSQ9ULU8 1353 aa29.27■■■□□ 2.28
RCSD1-204ENST00000472038 CUX1P39880 1505 aa29.26■■■□□ 2.27
RCSD1-204ENST00000472038 ZEB1P37275 1124 aaPredicted RBP29.16■■■□□ 2.26
RCSD1-204ENST00000472038 ERICH3Q5RHP9 1530 aa29.13■■■□□ 2.25
RCSD1-204ENST00000472038 KIF27Q86VH2 1401 aa29.12■■■□□ 2.25
RCSD1-204ENST00000472038 RAPGEF2Q9Y4G8 1499 aa29.11■■■□□ 2.25
RCSD1-204ENST00000472038 PRXQ9BXM0 1461 aa29.08■■■□□ 2.25
RCSD1-204ENST00000472038 CLIP1P30622 1438 aa29.06■■■□□ 2.24
RCSD1-204ENST00000472038 PPARGC1BQ86YN6 1023 aaKnown RBP28.97■■■□□ 2.23
RCSD1-204ENST00000472038 VPS8Q8N3P4 1428 aa28.93■■■□□ 2.22
RCSD1-204ENST00000472038 FANCD2Q9BXW9 1451 aa28.92■■■□□ 2.22
RCSD1-204ENST00000472038 FGD5Q6ZNL6 1462 aa28.83■■■□□ 2.21
RCSD1-204ENST00000472038 CUX2O14529 1486 aa28.81■■■□□ 2.2
RCSD1-204ENST00000472038 LAMC3Q9Y6N6 1575 aa28.81■■■□□ 2.2
RCSD1-204ENST00000472038 DNMBPQ6XZF7 1577 aa28.79■■■□□ 2.2
RCSD1-204ENST00000472038 IGF1RP08069 1367 aa28.76■■■□□ 2.19
RCSD1-204ENST00000472038 APLP2Q06481 763 aa28.73■■■□□ 2.19
RCSD1-204ENST00000472038 TOPBP1Q92547 1522 aa28.68■■■□□ 2.18
RCSD1-204ENST00000472038 NESP48681 1621 aa28.66■■■□□ 2.18
RCSD1-204ENST00000472038 ABCA10Q8WWZ4 1543 aa28.64■■■□□ 2.18
RCSD1-204ENST00000472038 ARAP1Q96P48 1450 aa28.64■■■□□ 2.17
RCSD1-204ENST00000472038 CARMIL1Q5VZK9 1371 aa28.63■■■□□ 2.17
RCSD1-204ENST00000472038 PDS5BQ9NTI5 1447 aa28.61■■■□□ 2.17
RCSD1-204ENST00000472038 POLA1P09884 1462 aaPredicted RBP28.6■■■□□ 2.17
RCSD1-204ENST00000472038 TTBK1Q5TCY1 1321 aaPredicted RBP28.59■■■□□ 2.17
RCSD1-204ENST00000472038 RANGAP1P46060 587 aaPredicted RBP28.55■■■□□ 2.16
RCSD1-204ENST00000472038 CCER1Q8TC90 406 aaPredicted RBP28.53■■■□□ 2.16
RCSD1-204ENST00000472038 ARHGAP35Q9NRY4 1499 aa28.51■■■□□ 2.15
RCSD1-204ENST00000472038 RAD54L2Q9Y4B4 1467 aa28.48■■■□□ 2.15
RCSD1-204ENST00000472038 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.48■■■□□ 2.15
RCSD1-204ENST00000472038 URB2Q14146 1524 aaKnown RBP28.48■■■□□ 2.15
RCSD1-204ENST00000472038 CUL7Q14999 1698 aa28.44■■■□□ 2.14
RCSD1-204ENST00000472038 WDR97A6NE52 1622 aa28.39■■■□□ 2.13
RCSD1-204ENST00000472038 MAP3K1Q13233 1512 aa28.33■■■□□ 2.13
RCSD1-204ENST00000472038 ABCA5Q8WWZ7 1642 aa28.29■■■□□ 2.12
RCSD1-204ENST00000472038 DNAJC5BQ9UF47 199 aa28.29■■■□□ 2.12
RCSD1-204ENST00000472038 KIF21AQ7Z4S6 1674 aa28.29■■■□□ 2.12
RCSD1-204ENST00000472038 FHAD1B1AJZ9 1412 aa28.28■■■□□ 2.12
RCSD1-204ENST00000472038 EFCAB5A4FU69 1503 aa28.26■■■□□ 2.11
RCSD1-204ENST00000472038 GAPVD1Q14C86 1478 aa28.23■■■□□ 2.11
RCSD1-204ENST00000472038 KANK4Q5T7N3 995 aaPredicted RBP28.21■■■□□ 2.11
RCSD1-204ENST00000472038 RRBP1Q9P2E9 1410 aaKnown RBP28.2■■■□□ 2.1
RCSD1-204ENST00000472038 HNRNPUL2Q1KMD3 747 aaKnown RBP28.2■■■□□ 2.1
RCSD1-204ENST00000472038 CTTNBP2Q8WZ74 1663 aa28.17■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms