RNA–Protein interactions for RNA: ENST00000471958.1

PARD3B-208, Transcript of par-3 family cell polarity regulator beta, humanhuman

TSL 3

Gene PARD3B, Length 441 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARD3B-208ENST00000471958 NISCHQ9Y2I1 1504 aa51.9■■■■■ 5.9
PARD3B-208ENST00000471958 CCDC180Q9P1Z9 1646 aa46.11■■■■■ 4.97
PARD3B-208ENST00000471958 ABCC9O60706 1549 aa44.94■■■■■ 4.78
PARD3B-208ENST00000471958 NACADO15069 1562 aa43.37■■■■■ 4.53
PARD3B-208ENST00000471958 RB1CC1Q8TDY2 1594 aa43.36■■■■■ 4.53
PARD3B-208ENST00000471958 DCAF8L2P0C7V8 631 aa43.29■■■■■ 4.52
PARD3B-208ENST00000471958 ZCCHC6Q5VYS8 1495 aaKnown RBP43.25■■■■■ 4.51
PARD3B-208ENST00000471958 MYO15BQ96JP2 1530 aa43.19■■■■■ 4.5
PARD3B-208ENST00000471958 DCAF1Q9Y4B6 1507 aa43.02■■■■■ 4.48
PARD3B-208ENST00000471958 UNC13AQ9UPW8 1703 aa42.26■■■■■ 4.36
PARD3B-208ENST00000471958 PABPN1Q86U42 306 aaKnown RBP eCLIP42.01■■■■■ 4.32
PARD3B-208ENST00000471958 SCRIBQ14160 1630 aa41.98■■■■■ 4.31
PARD3B-208ENST00000471958 BICRAQ9NZM4 1560 aa41.97■■■■■ 4.31
PARD3B-208ENST00000471958 SHROOM4Q9ULL8 1493 aa41.7■■■■■ 4.27
PARD3B-208ENST00000471958 DNAJC5BQ9UF47 199 aa41.14■■■■■ 4.18
PARD3B-208ENST00000471958 EIF4G1Q04637 1599 aaKnown RBP40.88■■■■■ 4.13
PARD3B-208ENST00000471958 CC2D2AQ9P2K1 1620 aa40.67■■■■■ 4.1
PARD3B-208ENST00000471958 CECR2Q9BXF3 1484 aa40.42■■■■■ 4.06
PARD3B-208ENST00000471958 BAZ1AQ9NRL2 1556 aaPredicted RBP40.24■■■■■ 4.03
PARD3B-208ENST00000471958 SMARCA4P51532 1647 aa40.22■■■■■ 4.03
PARD3B-208ENST00000471958 NCAPD3P42695 1498 aa40.01■■■■■ 4
PARD3B-208ENST00000471958 SMARCA2P51531 1590 aa40.01■■■■□ 3.99
PARD3B-208ENST00000471958 ATAD2BQ9ULI0 1458 aa40■■■■□ 3.99
PARD3B-208ENST00000471958 MROH2BQ7Z745 1585 aa39.94■■■■□ 3.98
PARD3B-208ENST00000471958 PEG3Q9GZU2 1588 aa39.89■■■■□ 3.98
PARD3B-208ENST00000471958 HMGXB3Q12766 1538 aa39.81■■■■□ 3.96
PARD3B-208ENST00000471958 BAZ1BQ9UIG0 1483 aaKnown RBP39.68■■■■□ 3.94
PARD3B-208ENST00000471958 RSF1Q96T23 1441 aaPredicted RBP39.57■■■■□ 3.93
PARD3B-208ENST00000471958 WIZO95785 1651 aa39.5■■■■□ 3.91
PARD3B-208ENST00000471958 TOP2AP11388 1531 aaKnown RBP39.15■■■■□ 3.86
PARD3B-208ENST00000471958 LAMC3Q9Y6N6 1575 aa38.92■■■■□ 3.82
PARD3B-208ENST00000471958 NESP48681 1621 aa38.89■■■■□ 3.82
PARD3B-208ENST00000471958 CADPSQ9ULU8 1353 aa38.84■■■■□ 3.81
PARD3B-208ENST00000471958 ERCC6Q03468 1493 aa38.78■■■■□ 3.8
PARD3B-208ENST00000471958 PDS5BQ9NTI5 1447 aa38.7■■■■□ 3.79
PARD3B-208ENST00000471958 CCDC88BA6NC98 1476 aa38.68■■■■□ 3.78
PARD3B-208ENST00000471958 CFTRP13569 1480 aa38.63■■■■□ 3.77
PARD3B-208ENST00000471958 SUPT5HO00267 1087 aaKnown RBP38.6■■■■□ 3.77
PARD3B-208ENST00000471958 KIF21AQ7Z4S6 1674 aa38.44■■■■□ 3.74
PARD3B-208ENST00000471958 CUX2O14529 1486 aa38.39■■■■□ 3.74
PARD3B-208ENST00000471958 FANCD2Q9BXW9 1451 aa38.35■■■■□ 3.73
PARD3B-208ENST00000471958 THOC2Q8NI27 1593 aaKnown RBP38.31■■■■□ 3.72
PARD3B-208ENST00000471958 CEP164Q9UPV0 1460 aa38.31■■■■□ 3.72
PARD3B-208ENST00000471958 PRDM2Q13029 1718 aa38.29■■■■□ 3.72
PARD3B-208ENST00000471958 MRC2Q9UBG0 1479 aa38.24■■■■□ 3.71
PARD3B-208ENST00000471958 WDR62O43379 1518 aa38.1■■■■□ 3.69
PARD3B-208ENST00000471958 URB2Q14146 1524 aaKnown RBP37.93■■■■□ 3.66
PARD3B-208ENST00000471958 ABCC8Q09428 1581 aa37.86■■■■□ 3.65
PARD3B-208ENST00000471958 TOPBP1Q92547 1522 aa37.75■■■■□ 3.63
PARD3B-208ENST00000471958 DNMBPQ6XZF7 1577 aa37.73■■■■□ 3.63
PARD3B-208ENST00000471958 IFT140Q96RY7 1462 aa37.53■■■■□ 3.6
PARD3B-208ENST00000471958 CUX1P39880 1505 aa37.48■■■■□ 3.59
PARD3B-208ENST00000471958 POLA1P09884 1462 aaPredicted RBP37.43■■■■□ 3.58
PARD3B-208ENST00000471958 FGD5Q6ZNL6 1462 aa37.35■■■■□ 3.57
PARD3B-208ENST00000471958 WRNQ14191 1432 aaPredicted RBP eCLIP37.33■■■■□ 3.57
PARD3B-208ENST00000471958 TARBP1Q13395 1621 aaKnown RBP37.32■■■■□ 3.56
PARD3B-208ENST00000471958 SOGA1O94964 1423 aa37.31■■■■□ 3.56
PARD3B-208ENST00000471958 ZNF608Q9ULD9 1512 aaPredicted RBP37.26■■■■□ 3.56
PARD3B-208ENST00000471958 RAD54L2Q9Y4B4 1467 aa37.23■■■■□ 3.55
PARD3B-208ENST00000471958 TOP2BQ02880 1626 aa37.21■■■■□ 3.55
PARD3B-208ENST00000471958 BIVM-ERCC5R4GMW8 1640 aa37.2■■■■□ 3.55
PARD3B-208ENST00000471958 SYNJ1O43426 1573 aa37.15■■■■□ 3.54
PARD3B-208ENST00000471958 WDR97A6NE52 1622 aa37.13■■■■□ 3.53
PARD3B-208ENST00000471958 EIF4G3O43432 1585 aaKnown RBP37.12■■■■□ 3.53
PARD3B-208ENST00000471958 AQRO60306 1485 aaKnown RBP eCLIP37.09■■■■□ 3.53
PARD3B-208ENST00000471958 DNAJC5Q9H3Z4 198 aa37.08■■■■□ 3.53
PARD3B-208ENST00000471958 TDRD9Q8NDG6 1382 aaKnown RBP37.04■■■■□ 3.52
PARD3B-208ENST00000471958 ABCA10Q8WWZ4 1543 aa37.04■■■■□ 3.52
PARD3B-208ENST00000471958 GAPVD1Q14C86 1478 aa36.88■■■■□ 3.5
PARD3B-208ENST00000471958 GRIN2BQ13224 1484 aa36.88■■■■□ 3.49
PARD3B-208ENST00000471958 OSCARQ8IYS5 282 aa36.84■■■■□ 3.49
PARD3B-208ENST00000471958 ABCA5Q8WWZ7 1642 aa36.83■■■■□ 3.49
PARD3B-208ENST00000471958 MAGI1Q96QZ7 1491 aaPredicted RBP36.78■■■■□ 3.48
PARD3B-208ENST00000471958 SNAPC4Q5SXM2 1469 aa36.75■■■■□ 3.47
PARD3B-208ENST00000471958 PBRM1Q86U86 1689 aa36.73■■■■□ 3.47
PARD3B-208ENST00000471958 FBLN2P98095 1184 aa36.64■■■■□ 3.46
PARD3B-208ENST00000471958 CHMP7Q8WUX9 453 aaPredicted RBP36.62■■■■□ 3.45
PARD3B-208ENST00000471958 CHD1O14646 1710 aa36.62■■■■□ 3.45
PARD3B-208ENST00000471958 SYNJ2O15056 1496 aa36.62■■■■□ 3.45
PARD3B-208ENST00000471958 ERICH3Q5RHP9 1530 aa36.61■■■■□ 3.45
PARD3B-208ENST00000471958 KIF27Q86VH2 1401 aa36.57■■■■□ 3.44
PARD3B-208ENST00000471958 TRIM41Q8WV44 630 aa36.53■■■■□ 3.44
PARD3B-208ENST00000471958 FHAD1B1AJZ9 1412 aa36.48■■■■□ 3.43
PARD3B-208ENST00000471958 ADAMTS12P58397 1594 aa36.47■■■■□ 3.43
PARD3B-208ENST00000471958 IGF1RP08069 1367 aa36.39■■■■□ 3.42
PARD3B-208ENST00000471958 GRIN2AQ12879 1464 aa36.37■■■■□ 3.41
PARD3B-208ENST00000471958 CUL7Q14999 1698 aa36.28■■■■□ 3.4
PARD3B-208ENST00000471958 CLASP1Q7Z460 1538 aa36.28■■■■□ 3.4
PARD3B-208ENST00000471958 NUP160Q12769 1436 aa36.23■■■■□ 3.39
PARD3B-208ENST00000471958 CARMIL1Q5VZK9 1371 aa36.18■■■■□ 3.38
PARD3B-208ENST00000471958 ARHGEF11O15085 1522 aa36.15■■■■□ 3.38
PARD3B-208ENST00000471958 CEP170Q5SW79 1584 aa36.14■■■■□ 3.38
PARD3B-208ENST00000471958 RUSC2Q8N2Y8 1516 aa36.13■■■■□ 3.38
PARD3B-208ENST00000471958 CHIC1Q5VXU3 224 aa36.12■■■■□ 3.37
PARD3B-208ENST00000471958 RIMBP3CA6NJZ7 1639 aa36.12■■■■□ 3.37
PARD3B-208ENST00000471958 RIMBP3BA6NNM3 1639 aa36.12■■■■□ 3.37
PARD3B-208ENST00000471958 RIMBP3Q9UFD9 1639 aa36.12■■■■□ 3.37
PARD3B-208ENST00000471958 EEA1Q15075 1411 aa35.98■■■■□ 3.35
PARD3B-208ENST00000471958 RAPGEF2Q9Y4G8 1499 aa35.98■■■■□ 3.35
PARD3B-208ENST00000471958 KIAA0586Q9BVV6 1533 aa35.93■■■■□ 3.34
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms