RNA–Protein interactions for RNA: ENST00000471845.3

RN7SL643P-201, Transcript of RNA, 7SL, cytoplasmic 643, pseudogene, humanhuman

BASIC

Gene RN7SL643P, Length 291 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL643P-201ENST00000471845 NISCHQ9Y2I1 1504 aa15.18■□□□□ 0.02
RN7SL643P-201ENST00000471845 CCDC180Q9P1Z9 1646 aa13.45□□□□□ -0.26
RN7SL643P-201ENST00000471845 CHIC1Q5VXU3 224 aa13.19□□□□□ -0.3
RN7SL643P-201ENST00000471845 AEBP2Q6ZN18 517 aaPredicted RBP13.05□□□□□ -0.32
RN7SL643P-201ENST00000471845 ABCC9O60706 1549 aa12.91□□□□□ -0.34
RN7SL643P-201ENST00000471845 MYO15BQ96JP2 1530 aa12.67□□□□□ -0.38
RN7SL643P-201ENST00000471845 ZCCHC6Q5VYS8 1495 aaKnown RBP12.67□□□□□ -0.38
RN7SL643P-201ENST00000471845 DCAF1Q9Y4B6 1507 aa12.65□□□□□ -0.38
RN7SL643P-201ENST00000471845 NACADO15069 1562 aa12.63□□□□□ -0.39
RN7SL643P-201ENST00000471845 RB1CC1Q8TDY2 1594 aa12.57□□□□□ -0.4
RN7SL643P-201ENST00000471845 DCAF8L2P0C7V8 631 aa12.52□□□□□ -0.41
RN7SL643P-201ENST00000471845 UNC13AQ9UPW8 1703 aa12.2□□□□□ -0.46
RN7SL643P-201ENST00000471845 SHROOM4Q9ULL8 1493 aa12.17□□□□□ -0.46
RN7SL643P-201ENST00000471845 SCRIBQ14160 1630 aa12.17□□□□□ -0.46
RN7SL643P-201ENST00000471845 BICRAQ9NZM4 1560 aa12.14□□□□□ -0.47
RN7SL643P-201ENST00000471845 PABPN1Q86U42 306 aaKnown RBP eCLIP12.08□□□□□ -0.48
RN7SL643P-201ENST00000471845 EIF4G1Q04637 1599 aaKnown RBP11.82□□□□□ -0.52
RN7SL643P-201ENST00000471845 BAZ1AQ9NRL2 1556 aaPredicted RBP11.77□□□□□ -0.53
RN7SL643P-201ENST00000471845 CECR2Q9BXF3 1484 aa11.75□□□□□ -0.53
RN7SL643P-201ENST00000471845 SMARCA4P51532 1647 aa11.71□□□□□ -0.53
RN7SL643P-201ENST00000471845 CC2D2AQ9P2K1 1620 aa11.71□□□□□ -0.53
RN7SL643P-201ENST00000471845 DNAJC5BQ9UF47 199 aa11.71□□□□□ -0.53
RN7SL643P-201ENST00000471845 PEG3Q9GZU2 1588 aa11.67□□□□□ -0.54
RN7SL643P-201ENST00000471845 NCAPD3P42695 1498 aa11.66□□□□□ -0.54
RN7SL643P-201ENST00000471845 SMARCA2P51531 1590 aa11.66□□□□□ -0.54
RN7SL643P-201ENST00000471845 MROH2BQ7Z745 1585 aa11.66□□□□□ -0.54
RN7SL643P-201ENST00000471845 ATAD2BQ9ULI0 1458 aa11.64□□□□□ -0.55
RN7SL643P-201ENST00000471845 RSF1Q96T23 1441 aaPredicted RBP11.61□□□□□ -0.55
RN7SL643P-201ENST00000471845 PHF23Q9BUL5 403 aaPredicted RBP11.61□□□□□ -0.55
RN7SL643P-201ENST00000471845 HMGXB3Q12766 1538 aa11.59□□□□□ -0.55
RN7SL643P-201ENST00000471845 BAZ1BQ9UIG0 1483 aaKnown RBP11.54□□□□□ -0.56
RN7SL643P-201ENST00000471845 WIZO95785 1651 aa11.51□□□□□ -0.57
RN7SL643P-201ENST00000471845 TOP2AP11388 1531 aaKnown RBP11.46□□□□□ -0.57
RN7SL643P-201ENST00000471845 SUPT5HO00267 1087 aaKnown RBP11.35□□□□□ -0.59
RN7SL643P-201ENST00000471845 CCDC88BA6NC98 1476 aa11.31□□□□□ -0.6
RN7SL643P-201ENST00000471845 CADPSQ9ULU8 1353 aa11.3□□□□□ -0.6
RN7SL643P-201ENST00000471845 LAMC3Q9Y6N6 1575 aa11.3□□□□□ -0.6
RN7SL643P-201ENST00000471845 CFTRP13569 1480 aa11.27□□□□□ -0.6
RN7SL643P-201ENST00000471845 PDS5BQ9NTI5 1447 aa11.23□□□□□ -0.61
RN7SL643P-201ENST00000471845 NESP48681 1621 aa11.2□□□□□ -0.62
RN7SL643P-201ENST00000471845 PRDM2Q13029 1718 aa11.15□□□□□ -0.63
RN7SL643P-201ENST00000471845 ERCC6Q03468 1493 aa11.14□□□□□ -0.63
RN7SL643P-201ENST00000471845 FANCD2Q9BXW9 1451 aa11.13□□□□□ -0.63
RN7SL643P-201ENST00000471845 CEP164Q9UPV0 1460 aa11.12□□□□□ -0.63
RN7SL643P-201ENST00000471845 KIF21AQ7Z4S6 1674 aa11.08□□□□□ -0.64
RN7SL643P-201ENST00000471845 ABCC8Q09428 1581 aa11.07□□□□□ -0.64
RN7SL643P-201ENST00000471845 MRC2Q9UBG0 1479 aa11.07□□□□□ -0.64
RN7SL643P-201ENST00000471845 SENP3Q9H4L4 574 aaPredicted RBP11.07□□□□□ -0.64
RN7SL643P-201ENST00000471845 THOC2Q8NI27 1593 aaKnown RBP11.04□□□□□ -0.64
RN7SL643P-201ENST00000471845 CUX2O14529 1486 aa11.04□□□□□ -0.64
RN7SL643P-201ENST00000471845 WDR62O43379 1518 aa11.04□□□□□ -0.64
RN7SL643P-201ENST00000471845 URB2Q14146 1524 aaKnown RBP10.99□□□□□ -0.65
RN7SL643P-201ENST00000471845 DNMBPQ6XZF7 1577 aa10.99□□□□□ -0.65
RN7SL643P-201ENST00000471845 TOPBP1Q92547 1522 aa10.98□□□□□ -0.65
RN7SL643P-201ENST00000471845 WRNQ14191 1432 aaPredicted RBP eCLIP10.94□□□□□ -0.66
RN7SL643P-201ENST00000471845 PLPPR3Q6T4P5 718 aa10.93□□□□□ -0.66
RN7SL643P-201ENST00000471845 CUX1P39880 1505 aa10.93□□□□□ -0.66
RN7SL643P-201ENST00000471845 TOP2BQ02880 1626 aa10.91□□□□□ -0.66
RN7SL643P-201ENST00000471845 IFT140Q96RY7 1462 aa10.9□□□□□ -0.66
RN7SL643P-201ENST00000471845 BIVM-ERCC5R4GMW8 1640 aa10.9□□□□□ -0.66
RN7SL643P-201ENST00000471845 POLA1P09884 1462 aaPredicted RBP10.89□□□□□ -0.67
RN7SL643P-201ENST00000471845 FGD5Q6ZNL6 1462 aa10.87□□□□□ -0.67
RN7SL643P-201ENST00000471845 SOGA1O94964 1423 aa10.86□□□□□ -0.67
RN7SL643P-201ENST00000471845 WDR97A6NE52 1622 aa10.86□□□□□ -0.67
RN7SL643P-201ENST00000471845 SYNJ1O43426 1573 aa10.86□□□□□ -0.67
RN7SL643P-201ENST00000471845 TARBP1Q13395 1621 aaKnown RBP10.84□□□□□ -0.67
RN7SL643P-201ENST00000471845 ABCA10Q8WWZ4 1543 aa10.82□□□□□ -0.68
RN7SL643P-201ENST00000471845 RAD54L2Q9Y4B4 1467 aa10.8□□□□□ -0.68
RN7SL643P-201ENST00000471845 TRIM41Q8WV44 630 aa10.78□□□□□ -0.68
RN7SL643P-201ENST00000471845 ZNF608Q9ULD9 1512 aaPredicted RBP10.76□□□□□ -0.69
RN7SL643P-201ENST00000471845 TDRD9Q8NDG6 1382 aaKnown RBP10.75□□□□□ -0.69
RN7SL643P-201ENST00000471845 GRIN2BQ13224 1484 aa10.74□□□□□ -0.69
RN7SL643P-201ENST00000471845 GAPVD1Q14C86 1478 aa10.74□□□□□ -0.69
RN7SL643P-201ENST00000471845 EIF4G3O43432 1585 aaKnown RBP10.73□□□□□ -0.69
RN7SL643P-201ENST00000471845 ABCA5Q8WWZ7 1642 aa10.73□□□□□ -0.69
RN7SL643P-201ENST00000471845 KIF27Q86VH2 1401 aa10.73□□□□□ -0.69
RN7SL643P-201ENST00000471845 AQRO60306 1485 aaKnown RBP eCLIP10.73□□□□□ -0.69
RN7SL643P-201ENST00000471845 ERICH3Q5RHP9 1530 aa10.7□□□□□ -0.7
RN7SL643P-201ENST00000471845 MAGI1Q96QZ7 1491 aaPredicted RBP10.7□□□□□ -0.7
RN7SL643P-201ENST00000471845 EEA1Q15075 1411 aa10.68□□□□□ -0.7
RN7SL643P-201ENST00000471845 IGF1RP08069 1367 aa10.66□□□□□ -0.7
RN7SL643P-201ENST00000471845 PBRM1Q86U86 1689 aa10.66□□□□□ -0.7
RN7SL643P-201ENST00000471845 FHAD1B1AJZ9 1412 aa10.65□□□□□ -0.7
RN7SL643P-201ENST00000471845 SYNJ2O15056 1496 aa10.64□□□□□ -0.71
RN7SL643P-201ENST00000471845 SNAPC4Q5SXM2 1469 aa10.64□□□□□ -0.71
RN7SL643P-201ENST00000471845 CUL7Q14999 1698 aa10.62□□□□□ -0.71
RN7SL643P-201ENST00000471845 CHMP7Q8WUX9 453 aaPredicted RBP10.61□□□□□ -0.71
RN7SL643P-201ENST00000471845 ADAMTS12P58397 1594 aa10.6□□□□□ -0.71
RN7SL643P-201ENST00000471845 OSCARQ8IYS5 282 aa10.6□□□□□ -0.71
RN7SL643P-201ENST00000471845 CSRNP3Q8WYN3 585 aa10.59□□□□□ -0.71
RN7SL643P-201ENST00000471845 CARMIL1Q5VZK9 1371 aa10.59□□□□□ -0.71
RN7SL643P-201ENST00000471845 RUSC2Q8N2Y8 1516 aa10.58□□□□□ -0.72
RN7SL643P-201ENST00000471845 GRIN2AQ12879 1464 aa10.57□□□□□ -0.72
RN7SL643P-201ENST00000471845 PRXQ9BXM0 1461 aa10.56□□□□□ -0.72
RN7SL643P-201ENST00000471845 RAPGEF2Q9Y4G8 1499 aa10.55□□□□□ -0.72
RN7SL643P-201ENST00000471845 FBLN2P98095 1184 aa10.55□□□□□ -0.72
RN7SL643P-201ENST00000471845 CHD1O14646 1710 aa10.55□□□□□ -0.72
RN7SL643P-201ENST00000471845 NUP160Q12769 1436 aa10.54□□□□□ -0.72
RN7SL643P-201ENST00000471845 DNAJC5Q9H3Z4 198 aa10.51□□□□□ -0.73
RN7SL643P-201ENST00000471845 CLASP1Q7Z460 1538 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 178 ms