RNA–Protein interactions for RNA: ENST00000471721.1

TDGF1-203, Transcript of teratocarcinoma-derived growth factor 1, humanhuman

TSL 2

Gene TDGF1, Length 704 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDGF1-203ENST00000471721 NISCHQ9Y2I1 1504 aa18.25■□□□□ 0.51
TDGF1-203ENST00000471721 CHIC1Q5VXU3 224 aa17.91■□□□□ 0.46
TDGF1-203ENST00000471721 AEBP2Q6ZN18 517 aaPredicted RBP17.6■□□□□ 0.41
TDGF1-203ENST00000471721 CCDC180Q9P1Z9 1646 aa16.25■□□□□ 0.19
TDGF1-203ENST00000471721 PHF23Q9BUL5 403 aaPredicted RBP15.77■□□□□ 0.12
TDGF1-203ENST00000471721 ABCC9O60706 1549 aa15.74■□□□□ 0.11
TDGF1-203ENST00000471721 DCAF8L2P0C7V8 631 aa15.31■□□□□ 0.04
TDGF1-203ENST00000471721 RB1CC1Q8TDY2 1594 aa15.24■□□□□ 0.03
TDGF1-203ENST00000471721 ZCCHC6Q5VYS8 1495 aaKnown RBP15.22■□□□□ 0.03
TDGF1-203ENST00000471721 NACADO15069 1562 aa15.22■□□□□ 0.03
TDGF1-203ENST00000471721 MYO15BQ96JP2 1530 aa15.12■□□□□ 0.01
TDGF1-203ENST00000471721 DCAF1Q9Y4B6 1507 aa15.1■□□□□ 0.01
TDGF1-203ENST00000471721 SENP3Q9H4L4 574 aaPredicted RBP14.94□□□□□ -0.02
TDGF1-203ENST00000471721 PLPPR3Q6T4P5 718 aa14.89□□□□□ -0.03
TDGF1-203ENST00000471721 UNC13AQ9UPW8 1703 aa14.86□□□□□ -0.03
TDGF1-203ENST00000471721 SCRIBQ14160 1630 aa14.83□□□□□ -0.04
TDGF1-203ENST00000471721 PABPN1Q86U42 306 aaKnown RBP eCLIP14.7□□□□□ -0.06
TDGF1-203ENST00000471721 BICRAQ9NZM4 1560 aa14.66□□□□□ -0.06
TDGF1-203ENST00000471721 SHROOM4Q9ULL8 1493 aa14.6□□□□□ -0.07
TDGF1-203ENST00000471721 DNAJC5BQ9UF47 199 aa14.35□□□□□ -0.11
TDGF1-203ENST00000471721 EIF4G1Q04637 1599 aaKnown RBP14.32□□□□□ -0.12
TDGF1-203ENST00000471721 CC2D2AQ9P2K1 1620 aa14.25□□□□□ -0.13
TDGF1-203ENST00000471721 BAZ1AQ9NRL2 1556 aaPredicted RBP14.19□□□□□ -0.14
TDGF1-203ENST00000471721 SMARCA4P51532 1647 aa14.17□□□□□ -0.14
TDGF1-203ENST00000471721 CECR2Q9BXF3 1484 aa14.17□□□□□ -0.14
TDGF1-203ENST00000471721 SMARCA2P51531 1590 aa14.09□□□□□ -0.15
TDGF1-203ENST00000471721 MROH2BQ7Z745 1585 aa14.05□□□□□ -0.16
TDGF1-203ENST00000471721 ATAD2BQ9ULI0 1458 aa14.02□□□□□ -0.16
TDGF1-203ENST00000471721 PEG3Q9GZU2 1588 aa13.99□□□□□ -0.17
TDGF1-203ENST00000471721 NCAPD3P42695 1498 aa13.99□□□□□ -0.17
TDGF1-203ENST00000471721 HMGXB3Q12766 1538 aa13.98□□□□□ -0.17
TDGF1-203ENST00000471721 BAZ1BQ9UIG0 1483 aaKnown RBP13.98□□□□□ -0.17
TDGF1-203ENST00000471721 WIZO95785 1651 aa13.95□□□□□ -0.18
TDGF1-203ENST00000471721 RSF1Q96T23 1441 aaPredicted RBP13.92□□□□□ -0.18
TDGF1-203ENST00000471721 ADRA2BP18089 450 aa13.84□□□□□ -0.19
TDGF1-203ENST00000471721 TOP2AP11388 1531 aaKnown RBP13.81□□□□□ -0.2
TDGF1-203ENST00000471721 SUPT5HO00267 1087 aaKnown RBP13.76□□□□□ -0.21
TDGF1-203ENST00000471721 FOXD1Q16676 465 aa13.72□□□□□ -0.21
TDGF1-203ENST00000471721 PPP6R1Q9UPN7 881 aa13.69□□□□□ -0.22
TDGF1-203ENST00000471721 LAMC3Q9Y6N6 1575 aa13.66□□□□□ -0.22
TDGF1-203ENST00000471721 ERCC6Q03468 1493 aa13.63□□□□□ -0.23
TDGF1-203ENST00000471721 CCDC88BA6NC98 1476 aa13.62□□□□□ -0.23
TDGF1-203ENST00000471721 NESP48681 1621 aa13.61□□□□□ -0.23
TDGF1-203ENST00000471721 CADPSQ9ULU8 1353 aa13.61□□□□□ -0.23
TDGF1-203ENST00000471721 KCNA4P22459 653 aa13.61□□□□□ -0.23
TDGF1-203ENST00000471721 PDS5BQ9NTI5 1447 aa13.58□□□□□ -0.24
TDGF1-203ENST00000471721 PRDM2Q13029 1718 aa13.57□□□□□ -0.24
TDGF1-203ENST00000471721 EHMT2Q96KQ7 1210 aa13.54□□□□□ -0.24
TDGF1-203ENST00000471721 CFTRP13569 1480 aa13.54□□□□□ -0.24
TDGF1-203ENST00000471721 KIF21AQ7Z4S6 1674 aa13.53□□□□□ -0.24
TDGF1-203ENST00000471721 CEP164Q9UPV0 1460 aa13.48□□□□□ -0.25
TDGF1-203ENST00000471721 FANCD2Q9BXW9 1451 aa13.48□□□□□ -0.25
TDGF1-203ENST00000471721 MRC2Q9UBG0 1479 aa13.42□□□□□ -0.26
TDGF1-203ENST00000471721 THOC2Q8NI27 1593 aaKnown RBP13.41□□□□□ -0.26
TDGF1-203ENST00000471721 CUX2O14529 1486 aa13.38□□□□□ -0.27
TDGF1-203ENST00000471721 WDR62O43379 1518 aa13.34□□□□□ -0.27
TDGF1-203ENST00000471721 ABCC8Q09428 1581 aa13.32□□□□□ -0.28
TDGF1-203ENST00000471721 URB2Q14146 1524 aaKnown RBP13.29□□□□□ -0.28
TDGF1-203ENST00000471721 DNMBPQ6XZF7 1577 aa13.29□□□□□ -0.28
TDGF1-203ENST00000471721 DNAJC5Q9H3Z4 198 aa13.28□□□□□ -0.28
TDGF1-203ENST00000471721 TOPBP1Q92547 1522 aa13.26□□□□□ -0.29
TDGF1-203ENST00000471721 CUX1P39880 1505 aa13.19□□□□□ -0.3
TDGF1-203ENST00000471721 WRNQ14191 1432 aaPredicted RBP eCLIP13.19□□□□□ -0.3
TDGF1-203ENST00000471721 PPP4R3CPQ6ZMV5 832 aa13.18□□□□□ -0.3
TDGF1-203ENST00000471721 IFT140Q96RY7 1462 aa13.17□□□□□ -0.3
TDGF1-203ENST00000471721 PIAS4Q8N2W9 510 aaPredicted RBP13.17□□□□□ -0.3
TDGF1-203ENST00000471721 FGD5Q6ZNL6 1462 aa13.16□□□□□ -0.3
TDGF1-203ENST00000471721 BIVM-ERCC5R4GMW8 1640 aa13.15□□□□□ -0.3
TDGF1-203ENST00000471721 POLA1P09884 1462 aaPredicted RBP13.15□□□□□ -0.3
TDGF1-203ENST00000471721 TOP2BQ02880 1626 aa13.14□□□□□ -0.31
TDGF1-203ENST00000471721 SLC4A1APQ9BWU0 796 aaKnown RBP13.14□□□□□ -0.31
TDGF1-203ENST00000471721 SOGA1O94964 1423 aa13.13□□□□□ -0.31
TDGF1-203ENST00000471721 SYNJ1O43426 1573 aa13.12□□□□□ -0.31
TDGF1-203ENST00000471721 NCBP3Q53F19 620 aaKnown RBP13.11□□□□□ -0.31
TDGF1-203ENST00000471721 TARBP1Q13395 1621 aaKnown RBP13.1□□□□□ -0.31
TDGF1-203ENST00000471721 RAD54L2Q9Y4B4 1467 aa13.08□□□□□ -0.32
TDGF1-203ENST00000471721 EIF4G3O43432 1585 aaKnown RBP13.07□□□□□ -0.32
TDGF1-203ENST00000471721 WDR97A6NE52 1622 aa13.06□□□□□ -0.32
TDGF1-203ENST00000471721 ZNF608Q9ULD9 1512 aaPredicted RBP13.05□□□□□ -0.32
TDGF1-203ENST00000471721 ABCA10Q8WWZ4 1543 aa13.02□□□□□ -0.33
TDGF1-203ENST00000471721 TRIM41Q8WV44 630 aa13.01□□□□□ -0.33
TDGF1-203ENST00000471721 TDRD9Q8NDG6 1382 aaKnown RBP13.01□□□□□ -0.33
TDGF1-203ENST00000471721 AQRO60306 1485 aaKnown RBP eCLIP13.01□□□□□ -0.33
TDGF1-203ENST00000471721 CSRNP3Q8WYN3 585 aa13□□□□□ -0.33
TDGF1-203ENST00000471721 PBRM1Q86U86 1689 aa12.99□□□□□ -0.33
TDGF1-203ENST00000471721 GAPVD1Q14C86 1478 aa12.98□□□□□ -0.33
TDGF1-203ENST00000471721 ABCA5Q8WWZ7 1642 aa12.97□□□□□ -0.33
TDGF1-203ENST00000471721 GRIN2BQ13224 1484 aa12.97□□□□□ -0.33
TDGF1-203ENST00000471721 FBLN2P98095 1184 aa12.93□□□□□ -0.34
TDGF1-203ENST00000471721 KIF27Q86VH2 1401 aa12.93□□□□□ -0.34
TDGF1-203ENST00000471721 SNAPC4Q5SXM2 1469 aa12.92□□□□□ -0.34
TDGF1-203ENST00000471721 MAGI1Q96QZ7 1491 aaPredicted RBP12.92□□□□□ -0.34
TDGF1-203ENST00000471721 CHD1O14646 1710 aa12.91□□□□□ -0.34
TDGF1-203ENST00000471721 ERICH3Q5RHP9 1530 aa12.89□□□□□ -0.35
TDGF1-203ENST00000471721 CHMP7Q8WUX9 453 aaPredicted RBP12.89□□□□□ -0.35
TDGF1-203ENST00000471721 SYNJ2O15056 1496 aa12.86□□□□□ -0.35
TDGF1-203ENST00000471721 OSCARQ8IYS5 282 aa12.86□□□□□ -0.35
TDGF1-203ENST00000471721 ADAMTS12P58397 1594 aa12.86□□□□□ -0.35
TDGF1-203ENST00000471721 CUL7Q14999 1698 aa12.85□□□□□ -0.35
TDGF1-203ENST00000471721 FHAD1B1AJZ9 1412 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms