RNA–Protein interactions for RNA: ENST00000471717.1

GPC2-202, Transcript of glypican 2, humanhuman

TSL 2

Gene GPC2, Length 2,129 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC2-202ENST00000471717 NISCHQ9Y2I1 1504 aa33.8■■■■□ 3
GPC2-202ENST00000471717 CCDC180Q9P1Z9 1646 aa29.11■■■□□ 2.25
GPC2-202ENST00000471717 ZCCHC6Q5VYS8 1495 aaKnown RBP28.53■■■□□ 2.16
GPC2-202ENST00000471717 SHROOM4Q9ULL8 1493 aa28.2■■■□□ 2.1
GPC2-202ENST00000471717 DCAF1Q9Y4B6 1507 aa27.85■■■□□ 2.05
GPC2-202ENST00000471717 DCAF8L2P0C7V8 631 aa27.82■■■□□ 2.04
GPC2-202ENST00000471717 SUPT5HO00267 1087 aaKnown RBP27.43■■□□□ 1.98
GPC2-202ENST00000471717 MYO15BQ96JP2 1530 aa27.25■■□□□ 1.95
GPC2-202ENST00000471717 ABCC9O60706 1549 aa27.08■■□□□ 1.93
GPC2-202ENST00000471717 SCRIBQ14160 1630 aa27■■□□□ 1.91
GPC2-202ENST00000471717 NACADO15069 1562 aa26.94■■□□□ 1.9
GPC2-202ENST00000471717 RB1CC1Q8TDY2 1594 aa26.57■■□□□ 1.84
GPC2-202ENST00000471717 CHIC1Q5VXU3 224 aa26.56■■□□□ 1.84
GPC2-202ENST00000471717 RSF1Q96T23 1441 aaPredicted RBP26.51■■□□□ 1.83
GPC2-202ENST00000471717 CECR2Q9BXF3 1484 aa26.32■■□□□ 1.8
GPC2-202ENST00000471717 UNC13AQ9UPW8 1703 aa26.27■■□□□ 1.8
GPC2-202ENST00000471717 MROH2BQ7Z745 1585 aa26.21■■□□□ 1.79
GPC2-202ENST00000471717 WIZO95785 1651 aa26.07■■□□□ 1.76
GPC2-202ENST00000471717 BAZ1AQ9NRL2 1556 aaPredicted RBP26.01■■□□□ 1.76
GPC2-202ENST00000471717 BICRAQ9NZM4 1560 aa25.88■■□□□ 1.73
GPC2-202ENST00000471717 SMARCA4P51532 1647 aa25.87■■□□□ 1.73
GPC2-202ENST00000471717 PABPN1Q86U42 306 aaKnown RBP eCLIP25.7■■□□□ 1.71
GPC2-202ENST00000471717 TOP2AP11388 1531 aaKnown RBP25.69■■□□□ 1.7
GPC2-202ENST00000471717 LOC105371045A0A1W2PR82 267 aa25.66■■□□□ 1.7
GPC2-202ENST00000471717 TRIM41Q8WV44 630 aa25.66■■□□□ 1.7
GPC2-202ENST00000471717 EIF4G1Q04637 1599 aaKnown RBP25.61■■□□□ 1.69
GPC2-202ENST00000471717 SMARCA2P51531 1590 aa25.53■■□□□ 1.68
GPC2-202ENST00000471717 CCDC88BA6NC98 1476 aa25.5■■□□□ 1.67
GPC2-202ENST00000471717 PEG3Q9GZU2 1588 aa25.48■■□□□ 1.67
GPC2-202ENST00000471717 FAM9AQ8IZU1 332 aaPredicted RBP25.31■■□□□ 1.64
GPC2-202ENST00000471717 ATAD2BQ9ULI0 1458 aa25.26■■□□□ 1.63
GPC2-202ENST00000471717 ABCC8Q09428 1581 aa25.26■■□□□ 1.63
GPC2-202ENST00000471717 PCGF6Q9BYE7 350 aa25.15■■□□□ 1.62
GPC2-202ENST00000471717 BAZ1BQ9UIG0 1483 aaKnown RBP25.14■■□□□ 1.62
GPC2-202ENST00000471717 EHMT2Q96KQ7 1210 aa25.01■■□□□ 1.59
GPC2-202ENST00000471717 WRNQ14191 1432 aaPredicted RBP eCLIP24.9■■□□□ 1.58
GPC2-202ENST00000471717 HMGXB3Q12766 1538 aa24.9■■□□□ 1.58
GPC2-202ENST00000471717 HRCP23327 699 aa24.9■■□□□ 1.58
GPC2-202ENST00000471717 SOGA1O94964 1423 aa24.89■■□□□ 1.58
GPC2-202ENST00000471717 NCAPD3P42695 1498 aa24.89■■□□□ 1.57
GPC2-202ENST00000471717 TRIM26Q12899 539 aaPredicted RBP24.88■■□□□ 1.57
GPC2-202ENST00000471717 SYNJ1O43426 1573 aa24.85■■□□□ 1.57
GPC2-202ENST00000471717 RUSC2Q8N2Y8 1516 aa24.81■■□□□ 1.56
GPC2-202ENST00000471717 EEA1Q15075 1411 aa24.79■■□□□ 1.56
GPC2-202ENST00000471717 CSRNP3Q8WYN3 585 aa24.7■■□□□ 1.54
GPC2-202ENST00000471717 TOP2BQ02880 1626 aa24.64■■□□□ 1.53
GPC2-202ENST00000471717 TNIKQ9UKE5 1360 aa24.61■■□□□ 1.53
GPC2-202ENST00000471717 BIVM-ERCC5R4GMW8 1640 aa24.6■■□□□ 1.53
GPC2-202ENST00000471717 CEP162Q5TB80 1403 aa24.58■■□□□ 1.52
GPC2-202ENST00000471717 GOLGA3Q08378 1498 aa24.56■■□□□ 1.52
GPC2-202ENST00000471717 CFTRP13569 1480 aa24.55■■□□□ 1.52
GPC2-202ENST00000471717 KIF21BO75037 1637 aa24.53■■□□□ 1.52
GPC2-202ENST00000471717 CC2D2AQ9P2K1 1620 aa24.5■■□□□ 1.51
GPC2-202ENST00000471717 PRDM2Q13029 1718 aa24.5■■□□□ 1.51
GPC2-202ENST00000471717 CEP164Q9UPV0 1460 aa24.48■■□□□ 1.51
GPC2-202ENST00000471717 UBTFP17480 764 aaKnown RBP24.47■■□□□ 1.51
GPC2-202ENST00000471717 CUX1P39880 1505 aa24.44■■□□□ 1.5
GPC2-202ENST00000471717 PPARGC1BQ86YN6 1023 aaKnown RBP24.44■■□□□ 1.5
GPC2-202ENST00000471717 RAPGEF2Q9Y4G8 1499 aa24.34■■□□□ 1.49
GPC2-202ENST00000471717 CADPSQ9ULU8 1353 aa24.32■■□□□ 1.48
GPC2-202ENST00000471717 PRXQ9BXM0 1461 aa24.22■■□□□ 1.47
GPC2-202ENST00000471717 ERICH3Q5RHP9 1530 aa24.21■■□□□ 1.47
GPC2-202ENST00000471717 CLIP1P30622 1438 aa24.21■■□□□ 1.47
GPC2-202ENST00000471717 KIF27Q86VH2 1401 aa24.18■■□□□ 1.46
GPC2-202ENST00000471717 ZEB1P37275 1124 aaPredicted RBP24.13■■□□□ 1.45
GPC2-202ENST00000471717 TTBK1Q5TCY1 1321 aaPredicted RBP24.1■■□□□ 1.45
GPC2-202ENST00000471717 VPS8Q8N3P4 1428 aa24.09■■□□□ 1.45
GPC2-202ENST00000471717 FANCD2Q9BXW9 1451 aa24.08■■□□□ 1.45
GPC2-202ENST00000471717 FGD5Q6ZNL6 1462 aa24.06■■□□□ 1.44
GPC2-202ENST00000471717 NESP48681 1621 aa24.02■■□□□ 1.44
GPC2-202ENST00000471717 CUX2O14529 1486 aa24.02■■□□□ 1.44
GPC2-202ENST00000471717 RANGAP1P46060 587 aaPredicted RBP23.99■■□□□ 1.43
GPC2-202ENST00000471717 DNMBPQ6XZF7 1577 aa23.96■■□□□ 1.43
GPC2-202ENST00000471717 IGF1RP08069 1367 aa23.95■■□□□ 1.42
GPC2-202ENST00000471717 LAMC3Q9Y6N6 1575 aa23.94■■□□□ 1.42
GPC2-202ENST00000471717 ARAP1Q96P48 1450 aa23.93■■□□□ 1.42
GPC2-202ENST00000471717 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.9■■□□□ 1.42
GPC2-202ENST00000471717 TOPBP1Q92547 1522 aa23.9■■□□□ 1.42
GPC2-202ENST00000471717 POLA1P09884 1462 aaPredicted RBP23.85■■□□□ 1.41
GPC2-202ENST00000471717 DNAJC5BQ9UF47 199 aa23.84■■□□□ 1.41
GPC2-202ENST00000471717 RAD54L2Q9Y4B4 1467 aa23.83■■□□□ 1.4
GPC2-202ENST00000471717 ABCA10Q8WWZ4 1543 aa23.82■■□□□ 1.4
GPC2-202ENST00000471717 CARMIL1Q5VZK9 1371 aa23.82■■□□□ 1.4
GPC2-202ENST00000471717 APLP2Q06481 763 aa23.81■■□□□ 1.4
GPC2-202ENST00000471717 CCER1Q8TC90 406 aaPredicted RBP23.81■■□□□ 1.4
GPC2-202ENST00000471717 ARHGAP35Q9NRY4 1499 aa23.81■■□□□ 1.4
GPC2-202ENST00000471717 URB2Q14146 1524 aaKnown RBP23.78■■□□□ 1.4
GPC2-202ENST00000471717 WDR97A6NE52 1622 aa23.74■■□□□ 1.39
GPC2-202ENST00000471717 KIF21AQ7Z4S6 1674 aa23.73■■□□□ 1.39
GPC2-202ENST00000471717 PDS5BQ9NTI5 1447 aa23.71■■□□□ 1.39
GPC2-202ENST00000471717 CUL7Q14999 1698 aa23.66■■□□□ 1.38
GPC2-202ENST00000471717 KANK4Q5T7N3 995 aaPredicted RBP23.64■■□□□ 1.37
GPC2-202ENST00000471717 HNRNPUL2Q1KMD3 747 aaKnown RBP23.61■■□□□ 1.37
GPC2-202ENST00000471717 ABCA5Q8WWZ7 1642 aa23.61■■□□□ 1.37
GPC2-202ENST00000471717 CTTNBP2Q8WZ74 1663 aa23.57■■□□□ 1.36
GPC2-202ENST00000471717 TDRD9Q8NDG6 1382 aaKnown RBP23.52■■□□□ 1.36
GPC2-202ENST00000471717 TARBP1Q13395 1621 aaKnown RBP23.51■■□□□ 1.35
GPC2-202ENST00000471717 GAPVD1Q14C86 1478 aa23.5■■□□□ 1.35
GPC2-202ENST00000471717 TIAM1Q13009 1591 aa23.5■■□□□ 1.35
GPC2-202ENST00000471717 MAP3K1Q13233 1512 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms