RNA–Protein interactions for RNA: ENST00000471607.3

RN7SL216P-201, Transcript of RNA, 7SL, cytoplasmic 216, pseudogene, humanhuman

BASIC

Gene RN7SL216P, Length 298 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL216P-201ENST00000471607 NISCHQ9Y2I1 1504 aa15.99■□□□□ 0.15
RN7SL216P-201ENST00000471607 CCDC180Q9P1Z9 1646 aa14.15□□□□□ -0.14
RN7SL216P-201ENST00000471607 ABCC9O60706 1549 aa13.76□□□□□ -0.21
RN7SL216P-201ENST00000471607 DCAF8L2P0C7V8 631 aa13.5□□□□□ -0.25
RN7SL216P-201ENST00000471607 ZCCHC6Q5VYS8 1495 aaKnown RBP13.35□□□□□ -0.27
RN7SL216P-201ENST00000471607 RB1CC1Q8TDY2 1594 aa13.28□□□□□ -0.28
RN7SL216P-201ENST00000471607 NACADO15069 1562 aa13.26□□□□□ -0.29
RN7SL216P-201ENST00000471607 MYO15BQ96JP2 1530 aa13.18□□□□□ -0.3
RN7SL216P-201ENST00000471607 DCAF1Q9Y4B6 1507 aa13.18□□□□□ -0.3
RN7SL216P-201ENST00000471607 SCRIBQ14160 1630 aa13.02□□□□□ -0.33
RN7SL216P-201ENST00000471607 SHROOM4Q9ULL8 1493 aa12.91□□□□□ -0.34
RN7SL216P-201ENST00000471607 UNC13AQ9UPW8 1703 aa12.9□□□□□ -0.34
RN7SL216P-201ENST00000471607 PABPN1Q86U42 306 aaKnown RBP eCLIP12.89□□□□□ -0.35
RN7SL216P-201ENST00000471607 BICRAQ9NZM4 1560 aa12.76□□□□□ -0.37
RN7SL216P-201ENST00000471607 EIF4G1Q04637 1599 aaKnown RBP12.48□□□□□ -0.41
RN7SL216P-201ENST00000471607 CECR2Q9BXF3 1484 aa12.43□□□□□ -0.42
RN7SL216P-201ENST00000471607 BAZ1AQ9NRL2 1556 aaPredicted RBP12.42□□□□□ -0.42
RN7SL216P-201ENST00000471607 CC2D2AQ9P2K1 1620 aa12.4□□□□□ -0.42
RN7SL216P-201ENST00000471607 SMARCA4P51532 1647 aa12.39□□□□□ -0.43
RN7SL216P-201ENST00000471607 DNAJC5BQ9UF47 199 aa12.33□□□□□ -0.44
RN7SL216P-201ENST00000471607 MROH2BQ7Z745 1585 aa12.33□□□□□ -0.44
RN7SL216P-201ENST00000471607 SMARCA2P51531 1590 aa12.3□□□□□ -0.44
RN7SL216P-201ENST00000471607 ATAD2BQ9ULI0 1458 aa12.26□□□□□ -0.45
RN7SL216P-201ENST00000471607 BAZ1BQ9UIG0 1483 aaKnown RBP12.25□□□□□ -0.45
RN7SL216P-201ENST00000471607 SUPT5HO00267 1087 aaKnown RBP12.24□□□□□ -0.45
RN7SL216P-201ENST00000471607 WIZO95785 1651 aa12.24□□□□□ -0.45
RN7SL216P-201ENST00000471607 RSF1Q96T23 1441 aaPredicted RBP12.24□□□□□ -0.45
RN7SL216P-201ENST00000471607 NCAPD3P42695 1498 aa12.19□□□□□ -0.46
RN7SL216P-201ENST00000471607 PEG3Q9GZU2 1588 aa12.18□□□□□ -0.46
RN7SL216P-201ENST00000471607 HMGXB3Q12766 1538 aa12.18□□□□□ -0.46
RN7SL216P-201ENST00000471607 TOP2AP11388 1531 aaKnown RBP12.12□□□□□ -0.47
RN7SL216P-201ENST00000471607 CCDC88BA6NC98 1476 aa11.95□□□□□ -0.5
RN7SL216P-201ENST00000471607 ERCC6Q03468 1493 aa11.92□□□□□ -0.5
RN7SL216P-201ENST00000471607 NESP48681 1621 aa11.91□□□□□ -0.5
RN7SL216P-201ENST00000471607 LAMC3Q9Y6N6 1575 aa11.91□□□□□ -0.5
RN7SL216P-201ENST00000471607 CADPSQ9ULU8 1353 aa11.89□□□□□ -0.51
RN7SL216P-201ENST00000471607 PDS5BQ9NTI5 1447 aa11.86□□□□□ -0.51
RN7SL216P-201ENST00000471607 CFTRP13569 1480 aa11.83□□□□□ -0.52
RN7SL216P-201ENST00000471607 FANCD2Q9BXW9 1451 aa11.8□□□□□ -0.52
RN7SL216P-201ENST00000471607 CEP164Q9UPV0 1460 aa11.8□□□□□ -0.52
RN7SL216P-201ENST00000471607 KIF21AQ7Z4S6 1674 aa11.79□□□□□ -0.52
RN7SL216P-201ENST00000471607 PRDM2Q13029 1718 aa11.79□□□□□ -0.52
RN7SL216P-201ENST00000471607 MRC2Q9UBG0 1479 aa11.71□□□□□ -0.53
RN7SL216P-201ENST00000471607 THOC2Q8NI27 1593 aaKnown RBP11.67□□□□□ -0.54
RN7SL216P-201ENST00000471607 ABCC8Q09428 1581 aa11.62□□□□□ -0.55
RN7SL216P-201ENST00000471607 WDR62O43379 1518 aa11.62□□□□□ -0.55
RN7SL216P-201ENST00000471607 URB2Q14146 1524 aaKnown RBP11.62□□□□□ -0.55
RN7SL216P-201ENST00000471607 DNMBPQ6XZF7 1577 aa11.62□□□□□ -0.55
RN7SL216P-201ENST00000471607 CUX2O14529 1486 aa11.61□□□□□ -0.55
RN7SL216P-201ENST00000471607 WRNQ14191 1432 aaPredicted RBP eCLIP11.6□□□□□ -0.55
RN7SL216P-201ENST00000471607 TOPBP1Q92547 1522 aa11.6□□□□□ -0.55
RN7SL216P-201ENST00000471607 CUX1P39880 1505 aa11.56□□□□□ -0.56
RN7SL216P-201ENST00000471607 FGD5Q6ZNL6 1462 aa11.54□□□□□ -0.56
RN7SL216P-201ENST00000471607 SYNJ1O43426 1573 aa11.53□□□□□ -0.56
RN7SL216P-201ENST00000471607 TRIM41Q8WV44 630 aa11.52□□□□□ -0.57
RN7SL216P-201ENST00000471607 TOP2BQ02880 1626 aa11.52□□□□□ -0.57
RN7SL216P-201ENST00000471607 POLA1P09884 1462 aaPredicted RBP11.51□□□□□ -0.57
RN7SL216P-201ENST00000471607 BIVM-ERCC5R4GMW8 1640 aa11.51□□□□□ -0.57
RN7SL216P-201ENST00000471607 SOGA1O94964 1423 aa11.51□□□□□ -0.57
RN7SL216P-201ENST00000471607 IFT140Q96RY7 1462 aa11.51□□□□□ -0.57
RN7SL216P-201ENST00000471607 RAD54L2Q9Y4B4 1467 aa11.48□□□□□ -0.57
RN7SL216P-201ENST00000471607 TARBP1Q13395 1621 aaKnown RBP11.42□□□□□ -0.58
RN7SL216P-201ENST00000471607 TDRD9Q8NDG6 1382 aaKnown RBP11.41□□□□□ -0.58
RN7SL216P-201ENST00000471607 EIF4G3O43432 1585 aaKnown RBP11.41□□□□□ -0.58
RN7SL216P-201ENST00000471607 ZNF608Q9ULD9 1512 aaPredicted RBP11.41□□□□□ -0.58
RN7SL216P-201ENST00000471607 AQRO60306 1485 aaKnown RBP eCLIP11.39□□□□□ -0.59
RN7SL216P-201ENST00000471607 CHIC1Q5VXU3 224 aa11.39□□□□□ -0.59
RN7SL216P-201ENST00000471607 ABCA10Q8WWZ4 1543 aa11.39□□□□□ -0.59
RN7SL216P-201ENST00000471607 WDR97A6NE52 1622 aa11.38□□□□□ -0.59
RN7SL216P-201ENST00000471607 FBLN2P98095 1184 aa11.37□□□□□ -0.59
RN7SL216P-201ENST00000471607 GAPVD1Q14C86 1478 aa11.37□□□□□ -0.59
RN7SL216P-201ENST00000471607 KIF27Q86VH2 1401 aa11.36□□□□□ -0.59
RN7SL216P-201ENST00000471607 GRIN2BQ13224 1484 aa11.35□□□□□ -0.59
RN7SL216P-201ENST00000471607 PBRM1Q86U86 1689 aa11.35□□□□□ -0.59
RN7SL216P-201ENST00000471607 FAM9AQ8IZU1 332 aaPredicted RBP11.34□□□□□ -0.59
RN7SL216P-201ENST00000471607 ABCA5Q8WWZ7 1642 aa11.33□□□□□ -0.6
RN7SL216P-201ENST00000471607 SNAPC4Q5SXM2 1469 aa11.32□□□□□ -0.6
RN7SL216P-201ENST00000471607 CHMP7Q8WUX9 453 aaPredicted RBP11.3□□□□□ -0.6
RN7SL216P-201ENST00000471607 MAGI1Q96QZ7 1491 aaPredicted RBP11.28□□□□□ -0.6
RN7SL216P-201ENST00000471607 ERICH3Q5RHP9 1530 aa11.28□□□□□ -0.6
RN7SL216P-201ENST00000471607 RUSC2Q8N2Y8 1516 aa11.25□□□□□ -0.61
RN7SL216P-201ENST00000471607 EHMT2Q96KQ7 1210 aa11.25□□□□□ -0.61
RN7SL216P-201ENST00000471607 EEA1Q15075 1411 aa11.25□□□□□ -0.61
RN7SL216P-201ENST00000471607 CUL7Q14999 1698 aa11.24□□□□□ -0.61
RN7SL216P-201ENST00000471607 FHAD1B1AJZ9 1412 aa11.24□□□□□ -0.61
RN7SL216P-201ENST00000471607 SYNJ2O15056 1496 aa11.24□□□□□ -0.61
RN7SL216P-201ENST00000471607 ADAMTS12P58397 1594 aa11.24□□□□□ -0.61
RN7SL216P-201ENST00000471607 CHD1O14646 1710 aa11.23□□□□□ -0.61
RN7SL216P-201ENST00000471607 CARMIL1Q5VZK9 1371 aa11.21□□□□□ -0.61
RN7SL216P-201ENST00000471607 IGF1RP08069 1367 aa11.2□□□□□ -0.62
RN7SL216P-201ENST00000471607 OSCARQ8IYS5 282 aa11.2□□□□□ -0.62
RN7SL216P-201ENST00000471607 CSRNP3Q8WYN3 585 aa11.2□□□□□ -0.62
RN7SL216P-201ENST00000471607 GRIN2AQ12879 1464 aa11.19□□□□□ -0.62
RN7SL216P-201ENST00000471607 RAPGEF2Q9Y4G8 1499 aa11.17□□□□□ -0.62
RN7SL216P-201ENST00000471607 UBTFP17480 764 aaKnown RBP11.13□□□□□ -0.63
RN7SL216P-201ENST00000471607 RANGAP1P46060 587 aaPredicted RBP11.12□□□□□ -0.63
RN7SL216P-201ENST00000471607 CEP170Q5SW79 1584 aa11.11□□□□□ -0.63
RN7SL216P-201ENST00000471607 GOLGA3Q08378 1498 aa11.1□□□□□ -0.63
RN7SL216P-201ENST00000471607 PRXQ9BXM0 1461 aa11.1□□□□□ -0.63
RN7SL216P-201ENST00000471607 KIF21BO75037 1637 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 325.4 ms