RNA–Protein interactions for RNA: ENST00000471578.5

CNIH3-204, Transcript of cornichon family AMPA receptor auxiliary protein 3, humanhuman

TSL 5

Gene CNIH3, Length 876 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3-204ENST00000471578 NISCHQ9Y2I1 1504 aa24.66■■□□□ 1.54
CNIH3-204ENST00000471578 CCDC180Q9P1Z9 1646 aa21.79■■□□□ 1.08
CNIH3-204ENST00000471578 ABCC9O60706 1549 aa21.36■■□□□ 1.01
CNIH3-204ENST00000471578 DCAF8L2P0C7V8 631 aa20.7■□□□□ 0.9
CNIH3-204ENST00000471578 NACADO15069 1562 aa20.58■□□□□ 0.88
CNIH3-204ENST00000471578 RB1CC1Q8TDY2 1594 aa20.56■□□□□ 0.88
CNIH3-204ENST00000471578 ZCCHC6Q5VYS8 1495 aaKnown RBP20.51■□□□□ 0.87
CNIH3-204ENST00000471578 MYO15BQ96JP2 1530 aa20.51■□□□□ 0.87
CNIH3-204ENST00000471578 DCAF1Q9Y4B6 1507 aa20.43■□□□□ 0.86
CNIH3-204ENST00000471578 PABPN1Q86U42 306 aaKnown RBP eCLIP20.05■□□□□ 0.8
CNIH3-204ENST00000471578 UNC13AQ9UPW8 1703 aa19.94■□□□□ 0.78
CNIH3-204ENST00000471578 BICRAQ9NZM4 1560 aa19.91■□□□□ 0.78
CNIH3-204ENST00000471578 SCRIBQ14160 1630 aa19.89■□□□□ 0.77
CNIH3-204ENST00000471578 SHROOM4Q9ULL8 1493 aa19.76■□□□□ 0.75
CNIH3-204ENST00000471578 DNAJC5BQ9UF47 199 aa19.66■□□□□ 0.74
CNIH3-204ENST00000471578 EIF4G1Q04637 1599 aaKnown RBP19.39■□□□□ 0.69
CNIH3-204ENST00000471578 CC2D2AQ9P2K1 1620 aa19.29■□□□□ 0.68
CNIH3-204ENST00000471578 CECR2Q9BXF3 1484 aa19.22■□□□□ 0.67
CNIH3-204ENST00000471578 BAZ1AQ9NRL2 1556 aaPredicted RBP19.09■□□□□ 0.65
CNIH3-204ENST00000471578 SMARCA4P51532 1647 aa19.05■□□□□ 0.64
CNIH3-204ENST00000471578 NCAPD3P42695 1498 aa19.04■□□□□ 0.64
CNIH3-204ENST00000471578 ATAD2BQ9ULI0 1458 aa19.03■□□□□ 0.64
CNIH3-204ENST00000471578 SMARCA2P51531 1590 aa18.98■□□□□ 0.63
CNIH3-204ENST00000471578 MROH2BQ7Z745 1585 aa18.98■□□□□ 0.63
CNIH3-204ENST00000471578 PEG3Q9GZU2 1588 aa18.91■□□□□ 0.62
CNIH3-204ENST00000471578 HMGXB3Q12766 1538 aa18.86■□□□□ 0.61
CNIH3-204ENST00000471578 BAZ1BQ9UIG0 1483 aaKnown RBP18.84■□□□□ 0.61
CNIH3-204ENST00000471578 RSF1Q96T23 1441 aaPredicted RBP18.84■□□□□ 0.61
CNIH3-204ENST00000471578 WIZO95785 1651 aa18.73■□□□□ 0.59
CNIH3-204ENST00000471578 TOP2AP11388 1531 aaKnown RBP18.56■□□□□ 0.56
CNIH3-204ENST00000471578 CADPSQ9ULU8 1353 aa18.51■□□□□ 0.55
CNIH3-204ENST00000471578 NESP48681 1621 aa18.49■□□□□ 0.55
CNIH3-204ENST00000471578 SUPT5HO00267 1087 aaKnown RBP18.45■□□□□ 0.54
CNIH3-204ENST00000471578 LAMC3Q9Y6N6 1575 aa18.45■□□□□ 0.54
CNIH3-204ENST00000471578 ERCC6Q03468 1493 aa18.43■□□□□ 0.54
CNIH3-204ENST00000471578 PDS5BQ9NTI5 1447 aa18.41■□□□□ 0.54
CNIH3-204ENST00000471578 CCDC88BA6NC98 1476 aa18.41■□□□□ 0.54
CNIH3-204ENST00000471578 CFTRP13569 1480 aa18.37■□□□□ 0.53
CNIH3-204ENST00000471578 FANCD2Q9BXW9 1451 aa18.23■□□□□ 0.51
CNIH3-204ENST00000471578 CUX2O14529 1486 aa18.22■□□□□ 0.51
CNIH3-204ENST00000471578 CEP164Q9UPV0 1460 aa18.19■□□□□ 0.5
CNIH3-204ENST00000471578 KIF21AQ7Z4S6 1674 aa18.16■□□□□ 0.5
CNIH3-204ENST00000471578 MRC2Q9UBG0 1479 aa18.15■□□□□ 0.5
CNIH3-204ENST00000471578 THOC2Q8NI27 1593 aaKnown RBP18.12■□□□□ 0.49
CNIH3-204ENST00000471578 WDR62O43379 1518 aa18.06■□□□□ 0.48
CNIH3-204ENST00000471578 PRDM2Q13029 1718 aa18.03■□□□□ 0.48
CNIH3-204ENST00000471578 URB2Q14146 1524 aaKnown RBP18.02■□□□□ 0.47
CNIH3-204ENST00000471578 ABCC8Q09428 1581 aa18■□□□□ 0.47
CNIH3-204ENST00000471578 TOPBP1Q92547 1522 aa17.93■□□□□ 0.46
CNIH3-204ENST00000471578 DNMBPQ6XZF7 1577 aa17.88■□□□□ 0.45
CNIH3-204ENST00000471578 IFT140Q96RY7 1462 aa17.84■□□□□ 0.45
CNIH3-204ENST00000471578 CUX1P39880 1505 aa17.79■□□□□ 0.44
CNIH3-204ENST00000471578 SOGA1O94964 1423 aa17.79■□□□□ 0.44
CNIH3-204ENST00000471578 POLA1P09884 1462 aaPredicted RBP17.78■□□□□ 0.44
CNIH3-204ENST00000471578 WRNQ14191 1432 aaPredicted RBP eCLIP17.75■□□□□ 0.43
CNIH3-204ENST00000471578 FGD5Q6ZNL6 1462 aa17.73■□□□□ 0.43
CNIH3-204ENST00000471578 ZNF608Q9ULD9 1512 aaPredicted RBP17.72■□□□□ 0.43
CNIH3-204ENST00000471578 RAD54L2Q9Y4B4 1467 aa17.71■□□□□ 0.43
CNIH3-204ENST00000471578 DNAJC5Q9H3Z4 198 aa17.71■□□□□ 0.43
CNIH3-204ENST00000471578 TARBP1Q13395 1621 aaKnown RBP17.69■□□□□ 0.42
CNIH3-204ENST00000471578 AQRO60306 1485 aaKnown RBP eCLIP17.67■□□□□ 0.42
CNIH3-204ENST00000471578 TDRD9Q8NDG6 1382 aaKnown RBP17.66■□□□□ 0.42
CNIH3-204ENST00000471578 TOP2BQ02880 1626 aa17.65■□□□□ 0.42
CNIH3-204ENST00000471578 SYNJ1O43426 1573 aa17.61■□□□□ 0.41
CNIH3-204ENST00000471578 OSCARQ8IYS5 282 aa17.6■□□□□ 0.41
CNIH3-204ENST00000471578 ABCA10Q8WWZ4 1543 aa17.6■□□□□ 0.41
CNIH3-204ENST00000471578 BIVM-ERCC5R4GMW8 1640 aa17.6■□□□□ 0.41
CNIH3-204ENST00000471578 WDR97A6NE52 1622 aa17.57■□□□□ 0.4
CNIH3-204ENST00000471578 EIF4G3O43432 1585 aaKnown RBP17.57■□□□□ 0.4
CNIH3-204ENST00000471578 GAPVD1Q14C86 1478 aa17.54■□□□□ 0.4
CNIH3-204ENST00000471578 GRIN2BQ13224 1484 aa17.53■□□□□ 0.4
CNIH3-204ENST00000471578 FBLN2P98095 1184 aa17.5■□□□□ 0.39
CNIH3-204ENST00000471578 CHMP7Q8WUX9 453 aaPredicted RBP17.49■□□□□ 0.39
CNIH3-204ENST00000471578 MAGI1Q96QZ7 1491 aaPredicted RBP17.46■□□□□ 0.39
CNIH3-204ENST00000471578 TRIM41Q8WV44 630 aa17.46■□□□□ 0.39
CNIH3-204ENST00000471578 SNAPC4Q5SXM2 1469 aa17.45■□□□□ 0.38
CNIH3-204ENST00000471578 ABCA5Q8WWZ7 1642 aa17.43■□□□□ 0.38
CNIH3-204ENST00000471578 KIF27Q86VH2 1401 aa17.4■□□□□ 0.38
CNIH3-204ENST00000471578 SYNJ2O15056 1496 aa17.4■□□□□ 0.38
CNIH3-204ENST00000471578 IGF1RP08069 1367 aa17.38■□□□□ 0.37
CNIH3-204ENST00000471578 ERICH3Q5RHP9 1530 aa17.37■□□□□ 0.37
CNIH3-204ENST00000471578 FHAD1B1AJZ9 1412 aa17.36■□□□□ 0.37
CNIH3-204ENST00000471578 PBRM1Q86U86 1689 aa17.34■□□□□ 0.37
CNIH3-204ENST00000471578 CHD1O14646 1710 aa17.29■□□□□ 0.36
CNIH3-204ENST00000471578 GRIN2AQ12879 1464 aa17.27■□□□□ 0.36
CNIH3-204ENST00000471578 CHIC1Q5VXU3 224 aa17.27■□□□□ 0.36
CNIH3-204ENST00000471578 ADAMTS12P58397 1594 aa17.25■□□□□ 0.35
CNIH3-204ENST00000471578 CARMIL1Q5VZK9 1371 aa17.25■□□□□ 0.35
CNIH3-204ENST00000471578 NUP160Q12769 1436 aa17.21■□□□□ 0.35
CNIH3-204ENST00000471578 RUSC2Q8N2Y8 1516 aa17.21■□□□□ 0.34
CNIH3-204ENST00000471578 CLASP1Q7Z460 1538 aa17.19■□□□□ 0.34
CNIH3-204ENST00000471578 CUL7Q14999 1698 aa17.16■□□□□ 0.34
CNIH3-204ENST00000471578 CSRNP3Q8WYN3 585 aa17.16■□□□□ 0.34
CNIH3-204ENST00000471578 ARHGEF11O15085 1522 aa17.16■□□□□ 0.34
CNIH3-204ENST00000471578 JPH4Q96JJ6 628 aa17.15■□□□□ 0.34
CNIH3-204ENST00000471578 CEP170Q5SW79 1584 aa17.14■□□□□ 0.33
CNIH3-204ENST00000471578 CYB5RLQ6IPT4 315 aa17.13■□□□□ 0.33
CNIH3-204ENST00000471578 RAPGEF2Q9Y4G8 1499 aa17.12■□□□□ 0.33
CNIH3-204ENST00000471578 RIMBP3CA6NJZ7 1639 aa17.11■□□□□ 0.33
CNIH3-204ENST00000471578 RIMBP3BA6NNM3 1639 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms