RNA–Protein interactions for RNA: ENST00000471121.1

HEPH-208, Transcript of hephaestin, humanhuman

TSL 2

Gene HEPH, Length 802 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HEPH-208ENST00000471121 NISCHQ9Y2I1 1504 aa23.19■■□□□ 1.3
HEPH-208ENST00000471121 CCDC180Q9P1Z9 1646 aa20.67■□□□□ 0.9
HEPH-208ENST00000471121 ABCC9O60706 1549 aa19.98■□□□□ 0.79
HEPH-208ENST00000471121 NACADO15069 1562 aa19.37■□□□□ 0.69
HEPH-208ENST00000471121 RB1CC1Q8TDY2 1594 aa19.37■□□□□ 0.69
HEPH-208ENST00000471121 ZCCHC6Q5VYS8 1495 aaKnown RBP19.36■□□□□ 0.69
HEPH-208ENST00000471121 DCAF8L2P0C7V8 631 aa19.34■□□□□ 0.69
HEPH-208ENST00000471121 MYO15BQ96JP2 1530 aa19.28■□□□□ 0.68
HEPH-208ENST00000471121 DCAF1Q9Y4B6 1507 aa19.24■□□□□ 0.67
HEPH-208ENST00000471121 UNC13AQ9UPW8 1703 aa18.9■□□□□ 0.62
HEPH-208ENST00000471121 SCRIBQ14160 1630 aa18.81■□□□□ 0.6
HEPH-208ENST00000471121 BICRAQ9NZM4 1560 aa18.66■□□□□ 0.58
HEPH-208ENST00000471121 PABPN1Q86U42 306 aaKnown RBP eCLIP18.64■□□□□ 0.57
HEPH-208ENST00000471121 SHROOM4Q9ULL8 1493 aa18.62■□□□□ 0.57
HEPH-208ENST00000471121 EIF4G1Q04637 1599 aaKnown RBP18.21■□□□□ 0.51
HEPH-208ENST00000471121 CC2D2AQ9P2K1 1620 aa18.11■□□□□ 0.49
HEPH-208ENST00000471121 DNAJC5BQ9UF47 199 aa18.06■□□□□ 0.48
HEPH-208ENST00000471121 BAZ1AQ9NRL2 1556 aaPredicted RBP18.03■□□□□ 0.48
HEPH-208ENST00000471121 SMARCA4P51532 1647 aa18.01■□□□□ 0.47
HEPH-208ENST00000471121 CECR2Q9BXF3 1484 aa17.98■□□□□ 0.47
HEPH-208ENST00000471121 SMARCA2P51531 1590 aa17.9■□□□□ 0.46
HEPH-208ENST00000471121 MROH2BQ7Z745 1585 aa17.84■□□□□ 0.45
HEPH-208ENST00000471121 ATAD2BQ9ULI0 1458 aa17.82■□□□□ 0.44
HEPH-208ENST00000471121 PEG3Q9GZU2 1588 aa17.81■□□□□ 0.44
HEPH-208ENST00000471121 NCAPD3P42695 1498 aa17.81■□□□□ 0.44
HEPH-208ENST00000471121 HMGXB3Q12766 1538 aa17.78■□□□□ 0.44
HEPH-208ENST00000471121 BAZ1BQ9UIG0 1483 aaKnown RBP17.75■□□□□ 0.43
HEPH-208ENST00000471121 WIZO95785 1651 aa17.7■□□□□ 0.42
HEPH-208ENST00000471121 RSF1Q96T23 1441 aaPredicted RBP17.69■□□□□ 0.42
HEPH-208ENST00000471121 TOP2AP11388 1531 aaKnown RBP17.56■□□□□ 0.4
HEPH-208ENST00000471121 LAMC3Q9Y6N6 1575 aa17.38■□□□□ 0.37
HEPH-208ENST00000471121 SUPT5HO00267 1087 aaKnown RBP17.37■□□□□ 0.37
HEPH-208ENST00000471121 ERCC6Q03468 1493 aa17.31■□□□□ 0.36
HEPH-208ENST00000471121 CADPSQ9ULU8 1353 aa17.29■□□□□ 0.36
HEPH-208ENST00000471121 NESP48681 1621 aa17.29■□□□□ 0.36
HEPH-208ENST00000471121 CCDC88BA6NC98 1476 aa17.28■□□□□ 0.36
HEPH-208ENST00000471121 PDS5BQ9NTI5 1447 aa17.25■□□□□ 0.35
HEPH-208ENST00000471121 PRDM2Q13029 1718 aa17.24■□□□□ 0.35
HEPH-208ENST00000471121 CFTRP13569 1480 aa17.22■□□□□ 0.35
HEPH-208ENST00000471121 KIF21AQ7Z4S6 1674 aa17.18■□□□□ 0.34
HEPH-208ENST00000471121 CEP164Q9UPV0 1460 aa17.12■□□□□ 0.33
HEPH-208ENST00000471121 FANCD2Q9BXW9 1451 aa17.12■□□□□ 0.33
HEPH-208ENST00000471121 THOC2Q8NI27 1593 aaKnown RBP17.06■□□□□ 0.32
HEPH-208ENST00000471121 CUX2O14529 1486 aa17.05■□□□□ 0.32
HEPH-208ENST00000471121 MRC2Q9UBG0 1479 aa17.05■□□□□ 0.32
HEPH-208ENST00000471121 WDR62O43379 1518 aa16.98■□□□□ 0.31
HEPH-208ENST00000471121 ABCC8Q09428 1581 aa16.94■□□□□ 0.3
HEPH-208ENST00000471121 URB2Q14146 1524 aaKnown RBP16.9■□□□□ 0.3
HEPH-208ENST00000471121 DNMBPQ6XZF7 1577 aa16.89■□□□□ 0.29
HEPH-208ENST00000471121 TOPBP1Q92547 1522 aa16.86■□□□□ 0.29
HEPH-208ENST00000471121 IFT140Q96RY7 1462 aa16.75■□□□□ 0.27
HEPH-208ENST00000471121 CUX1P39880 1505 aa16.75■□□□□ 0.27
HEPH-208ENST00000471121 WRNQ14191 1432 aaPredicted RBP eCLIP16.74■□□□□ 0.27
HEPH-208ENST00000471121 POLA1P09884 1462 aaPredicted RBP16.71■□□□□ 0.27
HEPH-208ENST00000471121 BIVM-ERCC5R4GMW8 1640 aa16.7■□□□□ 0.26
HEPH-208ENST00000471121 FGD5Q6ZNL6 1462 aa16.7■□□□□ 0.26
HEPH-208ENST00000471121 TOP2BQ02880 1626 aa16.7■□□□□ 0.26
HEPH-208ENST00000471121 SYNJ1O43426 1573 aa16.65■□□□□ 0.26
HEPH-208ENST00000471121 SOGA1O94964 1423 aa16.65■□□□□ 0.26
HEPH-208ENST00000471121 TARBP1Q13395 1621 aaKnown RBP16.64■□□□□ 0.25
HEPH-208ENST00000471121 WDR97A6NE52 1622 aa16.63■□□□□ 0.25
HEPH-208ENST00000471121 EIF4G3O43432 1585 aaKnown RBP16.6■□□□□ 0.25
HEPH-208ENST00000471121 RAD54L2Q9Y4B4 1467 aa16.6■□□□□ 0.25
HEPH-208ENST00000471121 ZNF608Q9ULD9 1512 aaPredicted RBP16.57■□□□□ 0.24
HEPH-208ENST00000471121 ABCA10Q8WWZ4 1543 aa16.55■□□□□ 0.24
HEPH-208ENST00000471121 AQRO60306 1485 aaKnown RBP eCLIP16.51■□□□□ 0.231e-7■■■□□ 17.9
HEPH-208ENST00000471121 TDRD9Q8NDG6 1382 aaKnown RBP16.51■□□□□ 0.23
HEPH-208ENST00000471121 PBRM1Q86U86 1689 aa16.5■□□□□ 0.23
HEPH-208ENST00000471121 ABCA5Q8WWZ7 1642 aa16.48■□□□□ 0.23
HEPH-208ENST00000471121 GAPVD1Q14C86 1478 aa16.48■□□□□ 0.23
HEPH-208ENST00000471121 GRIN2BQ13224 1484 aa16.47■□□□□ 0.23
HEPH-208ENST00000471121 TRIM41Q8WV44 630 aa16.44■□□□□ 0.22
HEPH-208ENST00000471121 MAGI1Q96QZ7 1491 aaPredicted RBP16.43■□□□□ 0.22
HEPH-208ENST00000471121 SNAPC4Q5SXM2 1469 aa16.42■□□□□ 0.22
HEPH-208ENST00000471121 KIF27Q86VH2 1401 aa16.41■□□□□ 0.22
HEPH-208ENST00000471121 ERICH3Q5RHP9 1530 aa16.39■□□□□ 0.21
HEPH-208ENST00000471121 CHD1O14646 1710 aa16.39■□□□□ 0.21
HEPH-208ENST00000471121 SYNJ2O15056 1496 aa16.35■□□□□ 0.21
HEPH-208ENST00000471121 FBLN2P98095 1184 aa16.35■□□□□ 0.21
HEPH-208ENST00000471121 OSCARQ8IYS5 282 aa16.34■□□□□ 0.21
HEPH-208ENST00000471121 CHMP7Q8WUX9 453 aaPredicted RBP16.34■□□□□ 0.21
HEPH-208ENST00000471121 ADAMTS12P58397 1594 aa16.33■□□□□ 0.2
HEPH-208ENST00000471121 CUL7Q14999 1698 aa16.32■□□□□ 0.2
HEPH-208ENST00000471121 FHAD1B1AJZ9 1412 aa16.3■□□□□ 0.2
HEPH-208ENST00000471121 DNAJC5Q9H3Z4 198 aa16.27■□□□□ 0.2
HEPH-208ENST00000471121 GRIN2AQ12879 1464 aa16.25■□□□□ 0.19
HEPH-208ENST00000471121 CHIC1Q5VXU3 224 aa16.24■□□□□ 0.19
HEPH-208ENST00000471121 IGF1RP08069 1367 aa16.22■□□□□ 0.19
HEPH-208ENST00000471121 EEA1Q15075 1411 aa16.21■□□□□ 0.19
HEPH-208ENST00000471121 CARMIL1Q5VZK9 1371 aa16.18■□□□□ 0.18
HEPH-208ENST00000471121 RUSC2Q8N2Y8 1516 aa16.16■□□□□ 0.18
HEPH-208ENST00000471121 CLASP1Q7Z460 1538 aa16.15■□□□□ 0.18
HEPH-208ENST00000471121 CEP170Q5SW79 1584 aa16.14■□□□□ 0.17
HEPH-208ENST00000471121 NUP160Q12769 1436 aa16.14■□□□□ 0.17
HEPH-208ENST00000471121 RAPGEF2Q9Y4G8 1499 aa16.13■□□□□ 0.17
HEPH-208ENST00000471121 CSRNP3Q8WYN3 585 aa16.09■□□□□ 0.17
HEPH-208ENST00000471121 RIMBP3CA6NJZ7 1639 aa16.06■□□□□ 0.16
HEPH-208ENST00000471121 RIMBP3BA6NNM3 1639 aa16.06■□□□□ 0.16
HEPH-208ENST00000471121 RIMBP3Q9UFD9 1639 aa16.06■□□□□ 0.16
HEPH-208ENST00000471121 ARHGEF11O15085 1522 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 1391.8 ms