RNA–Protein interactions for RNA: ENST00000470799.5

COL16A1-209, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 826 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-209ENST00000470799 NISCHQ9Y2I1 1504 aa38.98■■■■□ 3.83
COL16A1-209ENST00000470799 CCDC180Q9P1Z9 1646 aa34.7■■■■□ 3.15
COL16A1-209ENST00000470799 ABCC9O60706 1549 aa34.52■■■■□ 3.12
COL16A1-209ENST00000470799 DCAF8L2P0C7V8 631 aa33.05■■■□□ 2.88
COL16A1-209ENST00000470799 RB1CC1Q8TDY2 1594 aa32.96■■■□□ 2.87
COL16A1-209ENST00000470799 NACADO15069 1562 aa32.8■■■□□ 2.84
COL16A1-209ENST00000470799 MYO15BQ96JP2 1530 aa32.42■■■□□ 2.78
COL16A1-209ENST00000470799 ZCCHC6Q5VYS8 1495 aaKnown RBP32.36■■■□□ 2.77
COL16A1-209ENST00000470799 PABPN1Q86U42 306 aaKnown RBP eCLIP32.3■■■□□ 2.761e-6■■■■□ 25.6
COL16A1-209ENST00000470799 DCAF1Q9Y4B6 1507 aa32.16■■■□□ 2.74
COL16A1-209ENST00000470799 UNC13AQ9UPW8 1703 aa32.05■■■□□ 2.72
COL16A1-209ENST00000470799 DNAJC5BQ9UF47 199 aa32.01■■■□□ 2.71
COL16A1-209ENST00000470799 BICRAQ9NZM4 1560 aa31.89■■■□□ 2.7
COL16A1-209ENST00000470799 SCRIBQ14160 1630 aa31.78■■■□□ 2.68
COL16A1-209ENST00000470799 SHROOM4Q9ULL8 1493 aa31.52■■■□□ 2.64
COL16A1-209ENST00000470799 EIF4G1Q04637 1599 aaKnown RBP31.14■■■□□ 2.58
COL16A1-209ENST00000470799 CC2D2AQ9P2K1 1620 aa31.12■■■□□ 2.57
COL16A1-209ENST00000470799 CECR2Q9BXF3 1484 aa31.04■■■□□ 2.56
COL16A1-209ENST00000470799 NCAPD3P42695 1498 aa30.3■■■□□ 2.44
COL16A1-209ENST00000470799 SMARCA4P51532 1647 aa30.29■■■□□ 2.44
COL16A1-209ENST00000470799 ATAD2BQ9ULI0 1458 aa30.28■■■□□ 2.44
COL16A1-209ENST00000470799 BAZ1AQ9NRL2 1556 aaPredicted RBP30.24■■■□□ 2.43
COL16A1-209ENST00000470799 SMARCA2P51531 1590 aa30.21■■■□□ 2.43
COL16A1-209ENST00000470799 HMGXB3Q12766 1538 aa30.06■■■□□ 2.4
COL16A1-209ENST00000470799 BAZ1BQ9UIG0 1483 aaKnown RBP30.06■■■□□ 2.4
COL16A1-209ENST00000470799 MROH2BQ7Z745 1585 aa30.05■■■□□ 2.4
COL16A1-209ENST00000470799 PEG3Q9GZU2 1588 aa29.94■■■□□ 2.38
COL16A1-209ENST00000470799 ERCC6Q03468 1493 aa29.84■■■□□ 2.37
COL16A1-209ENST00000470799 NESP48681 1621 aa29.72■■■□□ 2.35
COL16A1-209ENST00000470799 WIZO95785 1651 aa29.69■■■□□ 2.34
COL16A1-209ENST00000470799 RSF1Q96T23 1441 aaPredicted RBP29.61■■■□□ 2.33
COL16A1-209ENST00000470799 LAMC3Q9Y6N6 1575 aa29.53■■■□□ 2.32
COL16A1-209ENST00000470799 CUX2O14529 1486 aa29.53■■■□□ 2.32
COL16A1-209ENST00000470799 CADPSQ9ULU8 1353 aa29.46■■■□□ 2.31
COL16A1-209ENST00000470799 PDS5BQ9NTI5 1447 aa29.45■■■□□ 2.31
COL16A1-209ENST00000470799 TOP2AP11388 1531 aaKnown RBP29.35■■■□□ 2.29
COL16A1-209ENST00000470799 KIF21AQ7Z4S6 1674 aa29.26■■■□□ 2.27
COL16A1-209ENST00000470799 THOC2Q8NI27 1593 aaKnown RBP29.23■■■□□ 2.27
COL16A1-209ENST00000470799 CFTRP13569 1480 aa29.15■■■□□ 2.26
COL16A1-209ENST00000470799 DNAJC5Q9H3Z4 198 aa29.14■■■□□ 2.26
COL16A1-209ENST00000470799 MRC2Q9UBG0 1479 aa29.13■■■□□ 2.25
COL16A1-209ENST00000470799 FANCD2Q9BXW9 1451 aa29.11■■■□□ 2.25
COL16A1-209ENST00000470799 CEP164Q9UPV0 1460 aa29.11■■■□□ 2.25
COL16A1-209ENST00000470799 CCDC88BA6NC98 1476 aa29.06■■■□□ 2.24
COL16A1-209ENST00000470799 WDR62O43379 1518 aa28.97■■■□□ 2.23
COL16A1-209ENST00000470799 SUPT5HO00267 1087 aaKnown RBP28.81■■■□□ 2.2
COL16A1-209ENST00000470799 URB2Q14146 1524 aaKnown RBP28.8■■■□□ 2.2
COL16A1-209ENST00000470799 PRDM2Q13029 1718 aa28.74■■■□□ 2.19
COL16A1-209ENST00000470799 TOPBP1Q92547 1522 aa28.57■■■□□ 2.16
COL16A1-209ENST00000470799 ABCC8Q09428 1581 aa28.56■■■□□ 2.16
COL16A1-209ENST00000470799 IFT140Q96RY7 1462 aa28.51■■■□□ 2.15
COL16A1-209ENST00000470799 DNMBPQ6XZF7 1577 aa28.48■■■□□ 2.15
COL16A1-209ENST00000470799 ZNF608Q9ULD9 1512 aaPredicted RBP28.41■■■□□ 2.14
COL16A1-209ENST00000470799 OSCARQ8IYS5 282 aa28.39■■■□□ 2.14
COL16A1-209ENST00000470799 POLA1P09884 1462 aaPredicted RBP28.31■■■□□ 2.12
COL16A1-209ENST00000470799 SOGA1O94964 1423 aa28.26■■■□□ 2.12
COL16A1-209ENST00000470799 AQRO60306 1485 aaKnown RBP eCLIP28.25■■■□□ 2.11
COL16A1-209ENST00000470799 RAD54L2Q9Y4B4 1467 aa28.24■■■□□ 2.11
COL16A1-209ENST00000470799 TARBP1Q13395 1621 aaKnown RBP28.21■■■□□ 2.11
COL16A1-209ENST00000470799 EIF4G3O43432 1585 aaKnown RBP28.21■■■□□ 2.11
COL16A1-209ENST00000470799 CUX1P39880 1505 aa28.21■■■□□ 2.11
COL16A1-209ENST00000470799 FGD5Q6ZNL6 1462 aa28.21■■■□□ 2.11
COL16A1-209ENST00000470799 TDRD9Q8NDG6 1382 aaKnown RBP28.17■■■□□ 2.1
COL16A1-209ENST00000470799 TRIM41Q8WV44 630 aa28.17■■■□□ 2.1
COL16A1-209ENST00000470799 FBLN2P98095 1184 aa28.15■■■□□ 2.1
COL16A1-209ENST00000470799 WRNQ14191 1432 aaPredicted RBP eCLIP27.96■■■□□ 2.07
COL16A1-209ENST00000470799 CHMP7Q8WUX9 453 aaPredicted RBP27.96■■■□□ 2.07
COL16A1-209ENST00000470799 SNAPC4Q5SXM2 1469 aa27.95■■■□□ 2.07
COL16A1-209ENST00000470799 WDR97A6NE52 1622 aa27.95■■■□□ 2.06
COL16A1-209ENST00000470799 GRIN2BQ13224 1484 aa27.94■■■□□ 2.06
COL16A1-209ENST00000470799 GAPVD1Q14C86 1478 aa27.9■■■□□ 2.06
COL16A1-209ENST00000470799 CHD1O14646 1710 aa27.9■■■□□ 2.06
COL16A1-209ENST00000470799 ABCA10Q8WWZ4 1543 aa27.87■■■□□ 2.05
COL16A1-209ENST00000470799 MAGI1Q96QZ7 1491 aaPredicted RBP27.87■■■□□ 2.05
COL16A1-209ENST00000470799 TOP2BQ02880 1626 aa27.84■■■□□ 2.05
COL16A1-209ENST00000470799 SYNJ1O43426 1573 aa27.83■■■□□ 2.05
COL16A1-209ENST00000470799 RIMBP3CA6NJZ7 1639 aa27.81■■■□□ 2.04
COL16A1-209ENST00000470799 RIMBP3BA6NNM3 1639 aa27.81■■■□□ 2.04
COL16A1-209ENST00000470799 RIMBP3Q9UFD9 1639 aa27.81■■■□□ 2.04
COL16A1-209ENST00000470799 ARHGEF11O15085 1522 aa27.8■■■□□ 2.04
COL16A1-209ENST00000470799 BIVM-ERCC5R4GMW8 1640 aa27.79■■■□□ 2.04
COL16A1-209ENST00000470799 SYNJ2O15056 1496 aa27.78■■■□□ 2.04
COL16A1-209ENST00000470799 PBRM1Q86U86 1689 aa27.74■■■□□ 2.03
COL16A1-209ENST00000470799 ABCA5Q8WWZ7 1642 aa27.74■■■□□ 2.03
COL16A1-209ENST00000470799 CYB5RLQ6IPT4 315 aa27.73■■■□□ 2.03
COL16A1-209ENST00000470799 CLASP1Q7Z460 1538 aa27.6■■■□□ 2.01
COL16A1-209ENST00000470799 FHAD1B1AJZ9 1412 aa27.57■■■□□ 2
COL16A1-209ENST00000470799 GRIN2AQ12879 1464 aa27.55■■■□□ 2
COL16A1-209ENST00000470799 ARAP1Q96P48 1450 aa27.55■■■□□ 2
COL16A1-209ENST00000470799 ERICH3Q5RHP9 1530 aa27.54■■■□□ 2
COL16A1-209ENST00000470799 ADAMTS12P58397 1594 aa27.53■■■□□ 2
COL16A1-209ENST00000470799 KIF27Q86VH2 1401 aa27.42■■□□□ 1.98
COL16A1-209ENST00000470799 NUP160Q12769 1436 aa27.41■■□□□ 1.98
COL16A1-209ENST00000470799 CEP170Q5SW79 1584 aa27.39■■□□□ 1.97
COL16A1-209ENST00000470799 TRHP20396 242 aaPredicted RBP27.36■■□□□ 1.97
COL16A1-209ENST00000470799 IGF1RP08069 1367 aa27.35■■□□□ 1.97
COL16A1-209ENST00000470799 JPH4Q96JJ6 628 aa27.27■■□□□ 1.96
COL16A1-209ENST00000470799 ERCC6L2Q5T890 1561 aa27.23■■□□□ 1.95
COL16A1-209ENST00000470799 PRG4Q92954 1404 aaPredicted RBP27.22■■□□□ 1.95
COL16A1-209ENST00000470799 CARMIL1Q5VZK9 1371 aa27.22■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms