RNA–Protein interactions for RNA: ENST00000470724.5

NXF3-205, Transcript of nuclear RNA export factor 3, humanhuman

TSL 3

Gene NXF3, Length 607 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-205ENST00000470724 NISCHQ9Y2I1 1504 aa23.01■■□□□ 1.27
NXF3-205ENST00000470724 CCDC180Q9P1Z9 1646 aa20.35■□□□□ 0.85
NXF3-205ENST00000470724 ABCC9O60706 1549 aa20.07■□□□□ 0.8
NXF3-205ENST00000470724 DCAF8L2P0C7V8 631 aa19.51■□□□□ 0.71
NXF3-205ENST00000470724 RB1CC1Q8TDY2 1594 aa19.23■□□□□ 0.67
NXF3-205ENST00000470724 NACADO15069 1562 aa19.18■□□□□ 0.66
NXF3-205ENST00000470724 ZCCHC6Q5VYS8 1495 aaKnown RBP19.16■□□□□ 0.66
NXF3-205ENST00000470724 MYO15BQ96JP2 1530 aa19■□□□□ 0.63
NXF3-205ENST00000470724 DCAF1Q9Y4B6 1507 aa18.95■□□□□ 0.62
NXF3-205ENST00000470724 PABPN1Q86U42 306 aaKnown RBP eCLIP18.83■□□□□ 0.6
NXF3-205ENST00000470724 SCRIBQ14160 1630 aa18.73■□□□□ 0.59
NXF3-205ENST00000470724 UNC13AQ9UPW8 1703 aa18.63■□□□□ 0.57
NXF3-205ENST00000470724 BICRAQ9NZM4 1560 aa18.56■□□□□ 0.56
NXF3-205ENST00000470724 SHROOM4Q9ULL8 1493 aa18.44■□□□□ 0.54
NXF3-205ENST00000470724 DNAJC5BQ9UF47 199 aa18.34■□□□□ 0.53
NXF3-205ENST00000470724 EIF4G1Q04637 1599 aaKnown RBP18.13■□□□□ 0.49
NXF3-205ENST00000470724 CC2D2AQ9P2K1 1620 aa18.05■□□□□ 0.48
NXF3-205ENST00000470724 CECR2Q9BXF3 1484 aa18.01■□□□□ 0.47
NXF3-205ENST00000470724 BAZ1AQ9NRL2 1556 aaPredicted RBP17.84■□□□□ 0.45
NXF3-205ENST00000470724 SMARCA4P51532 1647 aa17.83■□□□□ 0.44
NXF3-205ENST00000470724 ATAD2BQ9ULI0 1458 aa17.75■□□□□ 0.43
NXF3-205ENST00000470724 MROH2BQ7Z745 1585 aa17.75■□□□□ 0.43
NXF3-205ENST00000470724 SMARCA2P51531 1590 aa17.73■□□□□ 0.43
NXF3-205ENST00000470724 NCAPD3P42695 1498 aa17.7■□□□□ 0.42
NXF3-205ENST00000470724 BAZ1BQ9UIG0 1483 aaKnown RBP17.67■□□□□ 0.42
NXF3-205ENST00000470724 HMGXB3Q12766 1538 aa17.6■□□□□ 0.41
NXF3-205ENST00000470724 RSF1Q96T23 1441 aaPredicted RBP17.58■□□□□ 0.41
NXF3-205ENST00000470724 PEG3Q9GZU2 1588 aa17.57■□□□□ 0.4
NXF3-205ENST00000470724 WIZO95785 1651 aa17.55■□□□□ 0.4
NXF3-205ENST00000470724 SUPT5HO00267 1087 aaKnown RBP17.39■□□□□ 0.37
NXF3-205ENST00000470724 TOP2AP11388 1531 aaKnown RBP17.37■□□□□ 0.37
NXF3-205ENST00000470724 ERCC6Q03468 1493 aa17.35■□□□□ 0.37
NXF3-205ENST00000470724 NESP48681 1621 aa17.34■□□□□ 0.37
NXF3-205ENST00000470724 CADPSQ9ULU8 1353 aa17.26■□□□□ 0.35
NXF3-205ENST00000470724 LAMC3Q9Y6N6 1575 aa17.23■□□□□ 0.35
NXF3-205ENST00000470724 CCDC88BA6NC98 1476 aa17.21■□□□□ 0.35
NXF3-205ENST00000470724 PDS5BQ9NTI5 1447 aa17.21■□□□□ 0.34
NXF3-205ENST00000470724 CFTRP13569 1480 aa17.12■□□□□ 0.33
NXF3-205ENST00000470724 FANCD2Q9BXW9 1451 aa17.07■□□□□ 0.32
NXF3-205ENST00000470724 CEP164Q9UPV0 1460 aa17.05■□□□□ 0.32
NXF3-205ENST00000470724 KIF21AQ7Z4S6 1674 aa17.05■□□□□ 0.32
NXF3-205ENST00000470724 CUX2O14529 1486 aa17.01■□□□□ 0.31
NXF3-205ENST00000470724 MRC2Q9UBG0 1479 aa17■□□□□ 0.31
NXF3-205ENST00000470724 THOC2Q8NI27 1593 aaKnown RBP16.98■□□□□ 0.31
NXF3-205ENST00000470724 WDR62O43379 1518 aa16.88■□□□□ 0.29
NXF3-205ENST00000470724 URB2Q14146 1524 aaKnown RBP16.86■□□□□ 0.29
NXF3-205ENST00000470724 PRDM2Q13029 1718 aa16.85■□□□□ 0.29
NXF3-205ENST00000470724 TOPBP1Q92547 1522 aa16.77■□□□□ 0.28
NXF3-205ENST00000470724 ABCC8Q09428 1581 aa16.76■□□□□ 0.27
NXF3-205ENST00000470724 DNMBPQ6XZF7 1577 aa16.74■□□□□ 0.27
NXF3-205ENST00000470724 IFT140Q96RY7 1462 aa16.67■□□□□ 0.26
NXF3-205ENST00000470724 CUX1P39880 1505 aa16.65■□□□□ 0.26
NXF3-205ENST00000470724 POLA1P09884 1462 aaPredicted RBP16.64■□□□□ 0.25
NXF3-205ENST00000470724 FGD5Q6ZNL6 1462 aa16.63■□□□□ 0.25
NXF3-205ENST00000470724 SOGA1O94964 1423 aa16.62■□□□□ 0.25
NXF3-205ENST00000470724 WRNQ14191 1432 aaPredicted RBP eCLIP16.62■□□□□ 0.25
NXF3-205ENST00000470724 RAD54L2Q9Y4B4 1467 aa16.61■□□□□ 0.25
NXF3-205ENST00000470724 ZNF608Q9ULD9 1512 aaPredicted RBP16.6■□□□□ 0.25
NXF3-205ENST00000470724 TDRD9Q8NDG6 1382 aaKnown RBP16.56■□□□□ 0.24
NXF3-205ENST00000470724 AQRO60306 1485 aaKnown RBP eCLIP16.55■□□□□ 0.24
NXF3-205ENST00000470724 TARBP1Q13395 1621 aaKnown RBP16.52■□□□□ 0.23
NXF3-205ENST00000470724 SYNJ1O43426 1573 aa16.51■□□□□ 0.23
NXF3-205ENST00000470724 FBLN2P98095 1184 aa16.5■□□□□ 0.23
NXF3-205ENST00000470724 DNAJC5Q9H3Z4 198 aa16.5■□□□□ 0.23
NXF3-205ENST00000470724 EIF4G3O43432 1585 aaKnown RBP16.5■□□□□ 0.23
NXF3-205ENST00000470724 TOP2BQ02880 1626 aa16.48■□□□□ 0.23
NXF3-205ENST00000470724 BIVM-ERCC5R4GMW8 1640 aa16.45■□□□□ 0.22
NXF3-205ENST00000470724 ABCA10Q8WWZ4 1543 aa16.42■□□□□ 0.22
NXF3-205ENST00000470724 OSCARQ8IYS5 282 aa16.42■□□□□ 0.22
NXF3-205ENST00000470724 GAPVD1Q14C86 1478 aa16.41■□□□□ 0.22
NXF3-205ENST00000470724 GRIN2BQ13224 1484 aa16.4■□□□□ 0.22
NXF3-205ENST00000470724 CHMP7Q8WUX9 453 aaPredicted RBP16.39■□□□□ 0.21
NXF3-205ENST00000470724 TRIM41Q8WV44 630 aa16.39■□□□□ 0.21
NXF3-205ENST00000470724 SNAPC4Q5SXM2 1469 aa16.39■□□□□ 0.21
NXF3-205ENST00000470724 WDR97A6NE52 1622 aa16.36■□□□□ 0.21
NXF3-205ENST00000470724 MAGI1Q96QZ7 1491 aaPredicted RBP16.31■□□□□ 0.2
NXF3-205ENST00000470724 ABCA5Q8WWZ7 1642 aa16.3■□□□□ 0.2
NXF3-205ENST00000470724 KIF27Q86VH2 1401 aa16.28■□□□□ 0.2
NXF3-205ENST00000470724 PBRM1Q86U86 1689 aa16.27■□□□□ 0.2
NXF3-205ENST00000470724 SYNJ2O15056 1496 aa16.27■□□□□ 0.19
NXF3-205ENST00000470724 CHD1O14646 1710 aa16.24■□□□□ 0.19
NXF3-205ENST00000470724 FHAD1B1AJZ9 1412 aa16.22■□□□□ 0.19
NXF3-205ENST00000470724 ERICH3Q5RHP9 1530 aa16.22■□□□□ 0.19
NXF3-205ENST00000470724 ADAMTS12P58397 1594 aa16.19■□□□□ 0.18
NXF3-205ENST00000470724 IGF1RP08069 1367 aa16.18■□□□□ 0.18
NXF3-205ENST00000470724 GRIN2AQ12879 1464 aa16.16■□□□□ 0.18
NXF3-205ENST00000470724 CHIC1Q5VXU3 224 aa16.14■□□□□ 0.17
NXF3-205ENST00000470724 RUSC2Q8N2Y8 1516 aa16.13■□□□□ 0.17
NXF3-205ENST00000470724 CARMIL1Q5VZK9 1371 aa16.13■□□□□ 0.17
NXF3-205ENST00000470724 FAM9AQ8IZU1 332 aaPredicted RBP16.12■□□□□ 0.17
NXF3-205ENST00000470724 ARHGEF11O15085 1522 aa16.08■□□□□ 0.16
NXF3-205ENST00000470724 CLASP1Q7Z460 1538 aa16.07■□□□□ 0.16
NXF3-205ENST00000470724 CUL7Q14999 1698 aa16.07■□□□□ 0.16
NXF3-205ENST00000470724 CEP170Q5SW79 1584 aa16.06■□□□□ 0.16
NXF3-205ENST00000470724 CYB5RLQ6IPT4 315 aa16.06■□□□□ 0.16
NXF3-205ENST00000470724 NUP160Q12769 1436 aa16.05■□□□□ 0.16
NXF3-205ENST00000470724 RIMBP3CA6NJZ7 1639 aa16.05■□□□□ 0.16
NXF3-205ENST00000470724 RIMBP3BA6NNM3 1639 aa16.05■□□□□ 0.16
NXF3-205ENST00000470724 RIMBP3Q9UFD9 1639 aa16.05■□□□□ 0.16
NXF3-205ENST00000470724 CSRNP3Q8WYN3 585 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms