RNA–Protein interactions for RNA: ENST00000470672.1

IMP4-212, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 2

Gene IMP4, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-212ENST00000470672 NISCHQ9Y2I1 1504 aa47■■■■■ 5.11
IMP4-212ENST00000470672 CCDC180Q9P1Z9 1646 aa41.77■■■■■ 4.28
IMP4-212ENST00000470672 ABCC9O60706 1549 aa40.52■■■■■ 4.08
IMP4-212ENST00000470672 ZCCHC6Q5VYS8 1495 aaKnown RBP39.21■■■■□ 3.87
IMP4-212ENST00000470672 NACADO15069 1562 aa39.19■■■■□ 3.86
IMP4-212ENST00000470672 RB1CC1Q8TDY2 1594 aa39.16■■■■□ 3.86
IMP4-212ENST00000470672 MYO15BQ96JP2 1530 aa39.09■■■■□ 3.85
IMP4-212ENST00000470672 DCAF1Q9Y4B6 1507 aa38.98■■■■□ 3.83
IMP4-212ENST00000470672 DCAF8L2P0C7V8 631 aa38.96■■■■□ 3.83
IMP4-212ENST00000470672 UNC13AQ9UPW8 1703 aa38.3■■■■□ 3.72
IMP4-212ENST00000470672 SCRIBQ14160 1630 aa38■■■■□ 3.67
IMP4-212ENST00000470672 BICRAQ9NZM4 1560 aa37.97■■■■□ 3.67
IMP4-212ENST00000470672 PABPN1Q86U42 306 aaKnown RBP eCLIP37.82■■■■□ 3.64
IMP4-212ENST00000470672 SHROOM4Q9ULL8 1493 aa37.68■■■■□ 3.62
IMP4-212ENST00000470672 DNAJC5BQ9UF47 199 aa36.97■■■■□ 3.51
IMP4-212ENST00000470672 EIF4G1Q04637 1599 aaKnown RBP36.94■■■■□ 3.5
IMP4-212ENST00000470672 CC2D2AQ9P2K1 1620 aa36.72■■■■□ 3.47
IMP4-212ENST00000470672 CECR2Q9BXF3 1484 aa36.53■■■■□ 3.44
IMP4-212ENST00000470672 SMARCA4P51532 1647 aa36.43■■■■□ 3.42
IMP4-212ENST00000470672 BAZ1AQ9NRL2 1556 aaPredicted RBP36.43■■■■□ 3.42
IMP4-212ENST00000470672 MROH2BQ7Z745 1585 aa36.18■■■■□ 3.38
IMP4-212ENST00000470672 ATAD2BQ9ULI0 1458 aa36.17■■■■□ 3.38
IMP4-212ENST00000470672 SMARCA2P51531 1590 aa36.16■■■■□ 3.38
IMP4-212ENST00000470672 NCAPD3P42695 1498 aa36.14■■■■□ 3.38
IMP4-212ENST00000470672 PEG3Q9GZU2 1588 aa36.14■■■■□ 3.38
IMP4-212ENST00000470672 HMGXB3Q12766 1538 aa36.02■■■■□ 3.36
IMP4-212ENST00000470672 BAZ1BQ9UIG0 1483 aaKnown RBP35.86■■■■□ 3.33
IMP4-212ENST00000470672 RSF1Q96T23 1441 aaPredicted RBP35.84■■■■□ 3.33
IMP4-212ENST00000470672 WIZO95785 1651 aa35.8■■■■□ 3.32
IMP4-212ENST00000470672 TOP2AP11388 1531 aaKnown RBP35.47■■■■□ 3.27
IMP4-212ENST00000470672 LAMC3Q9Y6N6 1575 aa35.17■■■■□ 3.22
IMP4-212ENST00000470672 NESP48681 1621 aa35.12■■■■□ 3.21
IMP4-212ENST00000470672 CADPSQ9ULU8 1353 aa35.06■■■■□ 3.2
IMP4-212ENST00000470672 CCDC88BA6NC98 1476 aa35.01■■■■□ 3.19
IMP4-212ENST00000470672 SUPT5HO00267 1087 aaKnown RBP34.93■■■■□ 3.18
IMP4-212ENST00000470672 CFTRP13569 1480 aa34.92■■■■□ 3.18
IMP4-212ENST00000470672 ERCC6Q03468 1493 aa34.91■■■■□ 3.18
IMP4-212ENST00000470672 PDS5BQ9NTI5 1447 aa34.89■■■■□ 3.18
IMP4-212ENST00000470672 KIF21AQ7Z4S6 1674 aa34.78■■■■□ 3.16
IMP4-212ENST00000470672 PRDM2Q13029 1718 aa34.75■■■■□ 3.15
IMP4-212ENST00000470672 THOC2Q8NI27 1593 aaKnown RBP34.65■■■■□ 3.14
IMP4-212ENST00000470672 FANCD2Q9BXW9 1451 aa34.65■■■■□ 3.14
IMP4-212ENST00000470672 CEP164Q9UPV0 1460 aa34.6■■■■□ 3.13
IMP4-212ENST00000470672 CUX2O14529 1486 aa34.57■■■■□ 3.12
IMP4-212ENST00000470672 MRC2Q9UBG0 1479 aa34.52■■■■□ 3.12
IMP4-212ENST00000470672 WDR62O43379 1518 aa34.43■■■■□ 3.1
IMP4-212ENST00000470672 URB2Q14146 1524 aaKnown RBP34.3■■■■□ 3.08
IMP4-212ENST00000470672 ABCC8Q09428 1581 aa34.19■■■■□ 3.06
IMP4-212ENST00000470672 DNMBPQ6XZF7 1577 aa34.14■■■■□ 3.06
IMP4-212ENST00000470672 TOPBP1Q92547 1522 aa34.13■■■■□ 3.05
IMP4-212ENST00000470672 CUX1P39880 1505 aa33.94■■■■□ 3.02
IMP4-212ENST00000470672 IFT140Q96RY7 1462 aa33.88■■■■□ 3.01
IMP4-212ENST00000470672 POLA1P09884 1462 aaPredicted RBP33.86■■■■□ 3.01
IMP4-212ENST00000470672 FGD5Q6ZNL6 1462 aa33.79■■■■□ 3
IMP4-212ENST00000470672 WRNQ14191 1432 aaPredicted RBP eCLIP33.79■■■■□ 3
IMP4-212ENST00000470672 TARBP1Q13395 1621 aaKnown RBP33.78■■■■□ 3
IMP4-212ENST00000470672 BIVM-ERCC5R4GMW8 1640 aa33.75■■■□□ 2.99
IMP4-212ENST00000470672 TOP2BQ02880 1626 aa33.74■■■□□ 2.99
IMP4-212ENST00000470672 SYNJ1O43426 1573 aa33.7■■■□□ 2.99
IMP4-212ENST00000470672 SOGA1O94964 1423 aa33.69■■■□□ 2.98
IMP4-212ENST00000470672 ZNF608Q9ULD9 1512 aaPredicted RBP33.66■■■□□ 2.98
IMP4-212ENST00000470672 RAD54L2Q9Y4B4 1467 aa33.64■■■□□ 2.98
IMP4-212ENST00000470672 WDR97A6NE52 1622 aa33.6■■■□□ 2.97
IMP4-212ENST00000470672 EIF4G3O43432 1585 aaKnown RBP33.59■■■□□ 2.97
IMP4-212ENST00000470672 ABCA10Q8WWZ4 1543 aa33.52■■■□□ 2.96
IMP4-212ENST00000470672 AQRO60306 1485 aaKnown RBP eCLIP33.47■■■□□ 2.953e-7■■■■■ 39.8
IMP4-212ENST00000470672 TDRD9Q8NDG6 1382 aaKnown RBP33.43■■■□□ 2.94
IMP4-212ENST00000470672 ABCA5Q8WWZ7 1642 aa33.38■■■□□ 2.93
IMP4-212ENST00000470672 GAPVD1Q14C86 1478 aa33.32■■■□□ 2.92
IMP4-212ENST00000470672 GRIN2BQ13224 1484 aa33.31■■■□□ 2.92
IMP4-212ENST00000470672 PBRM1Q86U86 1689 aa33.28■■■□□ 2.92
IMP4-212ENST00000470672 MAGI1Q96QZ7 1491 aaPredicted RBP33.23■■■□□ 2.91
IMP4-212ENST00000470672 SNAPC4Q5SXM2 1469 aa33.2■■■□□ 2.91
IMP4-212ENST00000470672 DNAJC5Q9H3Z4 198 aa33.2■■■□□ 2.91
IMP4-212ENST00000470672 ERICH3Q5RHP9 1530 aa33.13■■■□□ 2.89
IMP4-212ENST00000470672 CHD1O14646 1710 aa33.13■■■□□ 2.89
IMP4-212ENST00000470672 OSCARQ8IYS5 282 aa33.08■■■□□ 2.89
IMP4-212ENST00000470672 SYNJ2O15056 1496 aa33.07■■■□□ 2.88
IMP4-212ENST00000470672 KIF27Q86VH2 1401 aa33.07■■■□□ 2.88
IMP4-212ENST00000470672 TRIM41Q8WV44 630 aa33.04■■■□□ 2.88
IMP4-212ENST00000470672 ADAMTS12P58397 1594 aa33.03■■■□□ 2.88
IMP4-212ENST00000470672 FHAD1B1AJZ9 1412 aa32.96■■■□□ 2.87
IMP4-212ENST00000470672 FBLN2P98095 1184 aa32.95■■■□□ 2.87
IMP4-212ENST00000470672 CHMP7Q8WUX9 453 aaPredicted RBP32.95■■■□□ 2.87
IMP4-212ENST00000470672 IGF1RP08069 1367 aa32.9■■■□□ 2.86
IMP4-212ENST00000470672 CUL7Q14999 1698 aa32.88■■■□□ 2.85
IMP4-212ENST00000470672 GRIN2AQ12879 1464 aa32.87■■■□□ 2.85
IMP4-212ENST00000470672 CLASP1Q7Z460 1538 aa32.8■■■□□ 2.84
IMP4-212ENST00000470672 CHIC1Q5VXU3 224 aa32.78■■■□□ 2.84
IMP4-212ENST00000470672 RUSC2Q8N2Y8 1516 aa32.77■■■□□ 2.84
IMP4-212ENST00000470672 NUP160Q12769 1436 aa32.76■■■□□ 2.83
IMP4-212ENST00000470672 CARMIL1Q5VZK9 1371 aa32.7■■■□□ 2.83
IMP4-212ENST00000470672 CEP170Q5SW79 1584 aa32.7■■■□□ 2.83
IMP4-212ENST00000470672 EEA1Q15075 1411 aa32.62■■■□□ 2.81
IMP4-212ENST00000470672 ARHGEF11O15085 1522 aa32.59■■■□□ 2.81
IMP4-212ENST00000470672 RIMBP3CA6NJZ7 1639 aa32.58■■■□□ 2.81
IMP4-212ENST00000470672 RIMBP3BA6NNM3 1639 aa32.58■■■□□ 2.81
IMP4-212ENST00000470672 RIMBP3Q9UFD9 1639 aa32.58■■■□□ 2.81
IMP4-212ENST00000470672 RAPGEF2Q9Y4G8 1499 aa32.55■■■□□ 2.8
IMP4-212ENST00000470672 PRXQ9BXM0 1461 aa32.51■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms