RNA–Protein interactions for RNA: ENST00000470455.5

ATP6V1A-204, Transcript of ATPase H+ transporting V1 subunit A, humanhuman

TSL 2

Gene ATP6V1A, Length 2,266 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1A-204ENST00000470455 NISCHQ9Y2I1 1504 aa19.18■□□□□ 0.66
ATP6V1A-204ENST00000470455 CCDC180Q9P1Z9 1646 aa16.73■□□□□ 0.27
ATP6V1A-204ENST00000470455 ABCC9O60706 1549 aa16.08■□□□□ 0.16
ATP6V1A-204ENST00000470455 ZCCHC6Q5VYS8 1495 aaKnown RBP16.05■□□□□ 0.16
ATP6V1A-204ENST00000470455 DCAF8L2P0C7V8 631 aa16.02■□□□□ 0.16
ATP6V1A-204ENST00000470455 DCAF1Q9Y4B6 1507 aa15.81■□□□□ 0.12
ATP6V1A-204ENST00000470455 MYO15BQ96JP2 1530 aa15.68■□□□□ 0.1
ATP6V1A-204ENST00000470455 NACADO15069 1562 aa15.66■□□□□ 0.1
ATP6V1A-204ENST00000470455 SHROOM4Q9ULL8 1493 aa15.62■□□□□ 0.09
ATP6V1A-204ENST00000470455 RB1CC1Q8TDY2 1594 aa15.57■□□□□ 0.08
ATP6V1A-204ENST00000470455 SCRIBQ14160 1630 aa15.43■□□□□ 0.06
ATP6V1A-204ENST00000470455 UNC13AQ9UPW8 1703 aa15.22■□□□□ 0.03
ATP6V1A-204ENST00000470455 PABPN1Q86U42 306 aaKnown RBP eCLIP15.18■□□□□ 0.02
ATP6V1A-204ENST00000470455 BICRAQ9NZM4 1560 aa15.11■□□□□ 0.01
ATP6V1A-204ENST00000470455 SUPT5HO00267 1087 aaKnown RBP14.97□□□□□ -0.01
ATP6V1A-204ENST00000470455 CECR2Q9BXF3 1484 aa14.95□□□□□ -0.02
ATP6V1A-204ENST00000470455 RSF1Q96T23 1441 aaPredicted RBP14.84□□□□□ -0.03
ATP6V1A-204ENST00000470455 MROH2BQ7Z745 1585 aa14.83□□□□□ -0.04
ATP6V1A-204ENST00000470455 BAZ1AQ9NRL2 1556 aaPredicted RBP14.8□□□□□ -0.04
ATP6V1A-204ENST00000470455 SMARCA4P51532 1647 aa14.76□□□□□ -0.05
ATP6V1A-204ENST00000470455 WIZO95785 1651 aa14.68□□□□□ -0.06
ATP6V1A-204ENST00000470455 EIF4G1Q04637 1599 aaKnown RBP14.67□□□□□ -0.06
ATP6V1A-204ENST00000470455 ATAD2BQ9ULI0 1458 aa14.59□□□□□ -0.07
ATP6V1A-204ENST00000470455 PEG3Q9GZU2 1588 aa14.56□□□□□ -0.08
ATP6V1A-204ENST00000470455 SMARCA2P51531 1590 aa14.55□□□□□ -0.08
ATP6V1A-204ENST00000470455 TOP2AP11388 1531 aaKnown RBP14.51□□□□□ -0.09
ATP6V1A-204ENST00000470455 CC2D2AQ9P2K1 1620 aa14.5□□□□□ -0.09
ATP6V1A-204ENST00000470455 BAZ1BQ9UIG0 1483 aaKnown RBP14.49□□□□□ -0.09
ATP6V1A-204ENST00000470455 NCAPD3P42695 1498 aa14.48□□□□□ -0.09
ATP6V1A-204ENST00000470455 HMGXB3Q12766 1538 aa14.4□□□□□ -0.1
ATP6V1A-204ENST00000470455 CCDC88BA6NC98 1476 aa14.4□□□□□ -0.1
ATP6V1A-204ENST00000470455 DNAJC5BQ9UF47 199 aa14.39□□□□□ -0.11
ATP6V1A-204ENST00000470455 CHIC1Q5VXU3 224 aa14.22□□□□□ -0.13
ATP6V1A-204ENST00000470455 CADPSQ9ULU8 1353 aa14.12□□□□□ -0.15
ATP6V1A-204ENST00000470455 CFTRP13569 1480 aa14.12□□□□□ -0.15
ATP6V1A-204ENST00000470455 TRIM41Q8WV44 630 aa14.06□□□□□ -0.16
ATP6V1A-204ENST00000470455 NESP48681 1621 aa14.06□□□□□ -0.16
ATP6V1A-204ENST00000470455 ABCC8Q09428 1581 aa14.04□□□□□ -0.16
ATP6V1A-204ENST00000470455 LAMC3Q9Y6N6 1575 aa13.98□□□□□ -0.17
ATP6V1A-204ENST00000470455 WRNQ14191 1432 aaPredicted RBP eCLIP13.97□□□□□ -0.17
ATP6V1A-204ENST00000470455 FANCD2Q9BXW9 1451 aa13.95□□□□□ -0.18
ATP6V1A-204ENST00000470455 PRDM2Q13029 1718 aa13.94□□□□□ -0.18
ATP6V1A-204ENST00000470455 PDS5BQ9NTI5 1447 aa13.93□□□□□ -0.18
ATP6V1A-204ENST00000470455 SYNJ1O43426 1573 aa13.9□□□□□ -0.18
ATP6V1A-204ENST00000470455 CEP164Q9UPV0 1460 aa13.87□□□□□ -0.19
ATP6V1A-204ENST00000470455 CUX1P39880 1505 aa13.86□□□□□ -0.19
ATP6V1A-204ENST00000470455 FAM9AQ8IZU1 332 aaPredicted RBP13.84□□□□□ -0.19
ATP6V1A-204ENST00000470455 TOP2BQ02880 1626 aa13.83□□□□□ -0.19
ATP6V1A-204ENST00000470455 KIF21AQ7Z4S6 1674 aa13.83□□□□□ -0.2
ATP6V1A-204ENST00000470455 BIVM-ERCC5R4GMW8 1640 aa13.81□□□□□ -0.2
ATP6V1A-204ENST00000470455 ERCC6Q03468 1493 aa13.79□□□□□ -0.2
ATP6V1A-204ENST00000470455 URB2Q14146 1524 aaKnown RBP13.79□□□□□ -0.2
ATP6V1A-204ENST00000470455 TOPBP1Q92547 1522 aa13.78□□□□□ -0.2
ATP6V1A-204ENST00000470455 SOGA1O94964 1423 aa13.77□□□□□ -0.21
ATP6V1A-204ENST00000470455 DNMBPQ6XZF7 1577 aa13.77□□□□□ -0.21
ATP6V1A-204ENST00000470455 FGD5Q6ZNL6 1462 aa13.74□□□□□ -0.21
ATP6V1A-204ENST00000470455 MRC2Q9UBG0 1479 aa13.74□□□□□ -0.21
ATP6V1A-204ENST00000470455 RUSC2Q8N2Y8 1516 aa13.73□□□□□ -0.21
ATP6V1A-204ENST00000470455 LOC105371045A0A1W2PR82 267 aa13.71□□□□□ -0.21
ATP6V1A-204ENST00000470455 POLA1P09884 1462 aaPredicted RBP13.7□□□□□ -0.22
ATP6V1A-204ENST00000470455 RAD54L2Q9Y4B4 1467 aa13.69□□□□□ -0.22
ATP6V1A-204ENST00000470455 EHMT2Q96KQ7 1210 aa13.68□□□□□ -0.22
ATP6V1A-204ENST00000470455 CSRNP3Q8WYN3 585 aa13.67□□□□□ -0.22
ATP6V1A-204ENST00000470455 EEA1Q15075 1411 aa13.65□□□□□ -0.22
ATP6V1A-204ENST00000470455 WDR62O43379 1518 aa13.65□□□□□ -0.22
ATP6V1A-204ENST00000470455 CUX2O14529 1486 aa13.64□□□□□ -0.23
ATP6V1A-204ENST00000470455 THOC2Q8NI27 1593 aaKnown RBP13.64□□□□□ -0.23
ATP6V1A-204ENST00000470455 KIF27Q86VH2 1401 aa13.63□□□□□ -0.23
ATP6V1A-204ENST00000470455 ABCA10Q8WWZ4 1543 aa13.6□□□□□ -0.23
ATP6V1A-204ENST00000470455 TDRD9Q8NDG6 1382 aaKnown RBP13.59□□□□□ -0.23
ATP6V1A-204ENST00000470455 TARBP1Q13395 1621 aaKnown RBP13.56□□□□□ -0.24
ATP6V1A-204ENST00000470455 IGF1RP08069 1367 aa13.55□□□□□ -0.24
ATP6V1A-204ENST00000470455 IFT140Q96RY7 1462 aa13.55□□□□□ -0.24
ATP6V1A-204ENST00000470455 WDR97A6NE52 1622 aa13.52□□□□□ -0.24
ATP6V1A-204ENST00000470455 AQRO60306 1485 aaKnown RBP eCLIP13.52□□□□□ -0.25
ATP6V1A-204ENST00000470455 GAPVD1Q14C86 1478 aa13.51□□□□□ -0.25
ATP6V1A-204ENST00000470455 ZNF608Q9ULD9 1512 aaPredicted RBP13.51□□□□□ -0.25
ATP6V1A-204ENST00000470455 UBTFP17480 764 aaKnown RBP13.5□□□□□ -0.25
ATP6V1A-204ENST00000470455 PRXQ9BXM0 1461 aa13.49□□□□□ -0.25
ATP6V1A-204ENST00000470455 CARMIL1Q5VZK9 1371 aa13.48□□□□□ -0.25
ATP6V1A-204ENST00000470455 ABCA5Q8WWZ7 1642 aa13.48□□□□□ -0.25
ATP6V1A-204ENST00000470455 GOLGA3Q08378 1498 aa13.48□□□□□ -0.25
ATP6V1A-204ENST00000470455 RAPGEF2Q9Y4G8 1499 aa13.48□□□□□ -0.25
ATP6V1A-204ENST00000470455 KIF21BO75037 1637 aa13.46□□□□□ -0.25
ATP6V1A-204ENST00000470455 ERICH3Q5RHP9 1530 aa13.43□□□□□ -0.26
ATP6V1A-204ENST00000470455 GRIN2BQ13224 1484 aa13.42□□□□□ -0.26
ATP6V1A-204ENST00000470455 TNIKQ9UKE5 1360 aa13.42□□□□□ -0.26
ATP6V1A-204ENST00000470455 EIF4G3O43432 1585 aaKnown RBP13.41□□□□□ -0.26
ATP6V1A-204ENST00000470455 PBRM1Q86U86 1689 aa13.39□□□□□ -0.27
ATP6V1A-204ENST00000470455 CUL7Q14999 1698 aa13.38□□□□□ -0.27
ATP6V1A-204ENST00000470455 RANGAP1P46060 587 aaPredicted RBP13.37□□□□□ -0.27
ATP6V1A-204ENST00000470455 FHAD1B1AJZ9 1412 aa13.36□□□□□ -0.27
ATP6V1A-204ENST00000470455 SNAPC4Q5SXM2 1469 aa13.36□□□□□ -0.27
ATP6V1A-204ENST00000470455 CEP162Q5TB80 1403 aa13.33□□□□□ -0.27
ATP6V1A-204ENST00000470455 FBLN2P98095 1184 aa13.33□□□□□ -0.28
ATP6V1A-204ENST00000470455 ADAMTS12P58397 1594 aa13.32□□□□□ -0.28
ATP6V1A-204ENST00000470455 CHMP7Q8WUX9 453 aaPredicted RBP13.32□□□□□ -0.28
ATP6V1A-204ENST00000470455 MAGI1Q96QZ7 1491 aaPredicted RBP13.3□□□□□ -0.28
ATP6V1A-204ENST00000470455 CLIP1P30622 1438 aa13.28□□□□□ -0.28
ATP6V1A-204ENST00000470455 SYNJ2O15056 1496 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms