RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 NISCHQ9Y2I1 1504 aa35.01■■■■□ 3.19
COL4A5-203ENST00000470339 CCDC180Q9P1Z9 1646 aa30.78■■■□□ 2.52
COL4A5-203ENST00000470339 ZCCHC6Q5VYS8 1495 aaKnown RBP29.34■■■□□ 2.29
COL4A5-203ENST00000470339 ABCC9O60706 1549 aa29.15■■■□□ 2.26
COL4A5-203ENST00000470339 DCAF1Q9Y4B6 1507 aa29.05■■■□□ 2.24
COL4A5-203ENST00000470339 MYO15BQ96JP2 1530 aa28.86■■■□□ 2.21
COL4A5-203ENST00000470339 DCAF8L2P0C7V8 631 aa28.82■■■□□ 2.2
COL4A5-203ENST00000470339 NACADO15069 1562 aa28.71■■■□□ 2.19
COL4A5-203ENST00000470339 RB1CC1Q8TDY2 1594 aa28.5■■■□□ 2.15
COL4A5-203ENST00000470339 SHROOM4Q9ULL8 1493 aa28.11■■■□□ 2.09
COL4A5-203ENST00000470339 SCRIBQ14160 1630 aa28.07■■■□□ 2.08
COL4A5-203ENST00000470339 UNC13AQ9UPW8 1703 aa27.91■■■□□ 2.06
COL4A5-203ENST00000470339 BICRAQ9NZM4 1560 aa27.6■■■□□ 2.01
COL4A5-203ENST00000470339 PABPN1Q86U42 306 aaKnown RBP eCLIP27.37■■□□□ 1.97
COL4A5-203ENST00000470339 CECR2Q9BXF3 1484 aa27.13■■□□□ 1.93
COL4A5-203ENST00000470339 BAZ1AQ9NRL2 1556 aaPredicted RBP27.08■■□□□ 1.93
COL4A5-203ENST00000470339 RSF1Q96T23 1441 aaPredicted RBP26.99■■□□□ 1.91
COL4A5-203ENST00000470339 SMARCA4P51532 1647 aa26.98■■□□□ 1.91
COL4A5-203ENST00000470339 MROH2BQ7Z745 1585 aa26.97■■□□□ 1.91
COL4A5-203ENST00000470339 SUPT5HO00267 1087 aaKnown RBP26.95■■□□□ 1.9
COL4A5-203ENST00000470339 EIF4G1Q04637 1599 aaKnown RBP26.78■■□□□ 1.88
COL4A5-203ENST00000470339 WIZO95785 1651 aa26.75■■□□□ 1.87
COL4A5-203ENST00000470339 PEG3Q9GZU2 1588 aa26.73■■□□□ 1.87
COL4A5-203ENST00000470339 SMARCA2P51531 1590 aa26.63■■□□□ 1.85
COL4A5-203ENST00000470339 DNAJC5BQ9UF47 199 aa26.6■■□□□ 1.85
COL4A5-203ENST00000470339 ATAD2BQ9ULI0 1458 aa26.58■■□□□ 1.85
COL4A5-203ENST00000470339 TOP2AP11388 1531 aaKnown RBP26.52■■□□□ 1.84
COL4A5-203ENST00000470339 NCAPD3P42695 1498 aa26.46■■□□□ 1.83
COL4A5-203ENST00000470339 CC2D2AQ9P2K1 1620 aa26.45■■□□□ 1.82
COL4A5-203ENST00000470339 HMGXB3Q12766 1538 aa26.41■■□□□ 1.82
COL4A5-203ENST00000470339 BAZ1BQ9UIG0 1483 aaKnown RBP26.41■■□□□ 1.82
COL4A5-203ENST00000470339 CCDC88BA6NC98 1476 aa26.19■■□□□ 1.78
COL4A5-203ENST00000470339 CFTRP13569 1480 aa25.77■■□□□ 1.72
COL4A5-203ENST00000470339 CADPSQ9ULU8 1353 aa25.72■■□□□ 1.71
COL4A5-203ENST00000470339 PRDM2Q13029 1718 aa25.72■■□□□ 1.71
COL4A5-203ENST00000470339 CHIC1Q5VXU3 224 aa25.72■■□□□ 1.71
COL4A5-203ENST00000470339 LAMC3Q9Y6N6 1575 aa25.63■■□□□ 1.69
COL4A5-203ENST00000470339 NESP48681 1621 aa25.48■■□□□ 1.67
COL4A5-203ENST00000470339 ABCC8Q09428 1581 aa25.48■■□□□ 1.67
COL4A5-203ENST00000470339 TRIM41Q8WV44 630 aa25.45■■□□□ 1.66
COL4A5-203ENST00000470339 WRNQ14191 1432 aaPredicted RBP eCLIP25.42■■□□□ 1.66
COL4A5-203ENST00000470339 PDS5BQ9NTI5 1447 aa25.41■■□□□ 1.66
COL4A5-203ENST00000470339 FANCD2Q9BXW9 1451 aa25.4■■□□□ 1.66
COL4A5-203ENST00000470339 BIVM-ERCC5R4GMW8 1640 aa25.31■■□□□ 1.64
COL4A5-203ENST00000470339 SYNJ1O43426 1573 aa25.31■■□□□ 1.64
COL4A5-203ENST00000470339 TOP2BQ02880 1626 aa25.3■■□□□ 1.64
COL4A5-203ENST00000470339 CEP164Q9UPV0 1460 aa25.29■■□□□ 1.64
COL4A5-203ENST00000470339 KIF21AQ7Z4S6 1674 aa25.27■■□□□ 1.64
COL4A5-203ENST00000470339 CUX1P39880 1505 aa25.25■■□□□ 1.63
COL4A5-203ENST00000470339 DNMBPQ6XZF7 1577 aa25.18■■□□□ 1.62
COL4A5-203ENST00000470339 TOPBP1Q92547 1522 aa25.12■■□□□ 1.61
COL4A5-203ENST00000470339 URB2Q14146 1524 aaKnown RBP25.1■■□□□ 1.61
COL4A5-203ENST00000470339 MRC2Q9UBG0 1479 aa25.08■■□□□ 1.6
COL4A5-203ENST00000470339 ERCC6Q03468 1493 aa25.06■■□□□ 1.6
COL4A5-203ENST00000470339 FGD5Q6ZNL6 1462 aa25.02■■□□□ 1.6
COL4A5-203ENST00000470339 EEA1Q15075 1411 aa25■■□□□ 1.59
COL4A5-203ENST00000470339 WDR62O43379 1518 aa24.97■■□□□ 1.59
COL4A5-203ENST00000470339 POLA1P09884 1462 aaPredicted RBP24.95■■□□□ 1.58
COL4A5-203ENST00000470339 SOGA1O94964 1423 aa24.95■■□□□ 1.58
COL4A5-203ENST00000470339 THOC2Q8NI27 1593 aaKnown RBP24.94■■□□□ 1.58
COL4A5-203ENST00000470339 RUSC2Q8N2Y8 1516 aa24.85■■□□□ 1.57
COL4A5-203ENST00000470339 ABCA10Q8WWZ4 1543 aa24.85■■□□□ 1.57
COL4A5-203ENST00000470339 FAM9AQ8IZU1 332 aaPredicted RBP24.84■■□□□ 1.57
COL4A5-203ENST00000470339 KIF27Q86VH2 1401 aa24.84■■□□□ 1.57
COL4A5-203ENST00000470339 WDR97A6NE52 1622 aa24.82■■□□□ 1.56
COL4A5-203ENST00000470339 RAD54L2Q9Y4B4 1467 aa24.81■■□□□ 1.56
COL4A5-203ENST00000470339 CSRNP3Q8WYN3 585 aa24.8■■□□□ 1.56
COL4A5-203ENST00000470339 TARBP1Q13395 1621 aaKnown RBP24.79■■□□□ 1.56
COL4A5-203ENST00000470339 CUX2O14529 1486 aa24.78■■□□□ 1.56
COL4A5-203ENST00000470339 IFT140Q96RY7 1462 aa24.74■■□□□ 1.55
COL4A5-203ENST00000470339 ABCA5Q8WWZ7 1642 aa24.67■■□□□ 1.54
COL4A5-203ENST00000470339 KIF21BO75037 1637 aa24.66■■□□□ 1.54
COL4A5-203ENST00000470339 LOC105371045A0A1W2PR82 267 aa24.65■■□□□ 1.54
COL4A5-203ENST00000470339 IGF1RP08069 1367 aa24.63■■□□□ 1.53
COL4A5-203ENST00000470339 GAPVD1Q14C86 1478 aa24.61■■□□□ 1.53
COL4A5-203ENST00000470339 PRXQ9BXM0 1461 aa24.6■■□□□ 1.53
COL4A5-203ENST00000470339 TDRD9Q8NDG6 1382 aaKnown RBP24.6■■□□□ 1.53
COL4A5-203ENST00000470339 ERICH3Q5RHP9 1530 aa24.58■■□□□ 1.53
COL4A5-203ENST00000470339 GOLGA3Q08378 1498 aa24.56■■□□□ 1.52
COL4A5-203ENST00000470339 CUL7Q14999 1698 aa24.55■■□□□ 1.52
COL4A5-203ENST00000470339 PBRM1Q86U86 1689 aa24.53■■□□□ 1.52
COL4A5-203ENST00000470339 ZNF608Q9ULD9 1512 aaPredicted RBP24.51■■□□□ 1.51
COL4A5-203ENST00000470339 CARMIL1Q5VZK9 1371 aa24.5■■□□□ 1.51
COL4A5-203ENST00000470339 AQRO60306 1485 aaKnown RBP eCLIP24.5■■□□□ 1.51
COL4A5-203ENST00000470339 GRIN2BQ13224 1484 aa24.49■■□□□ 1.51
COL4A5-203ENST00000470339 EIF4G3O43432 1585 aaKnown RBP24.48■■□□□ 1.51
COL4A5-203ENST00000470339 RAPGEF2Q9Y4G8 1499 aa24.47■■□□□ 1.51
COL4A5-203ENST00000470339 TNIKQ9UKE5 1360 aa24.44■■□□□ 1.5
COL4A5-203ENST00000470339 UBTFP17480 764 aaKnown RBP24.4■■□□□ 1.5
COL4A5-203ENST00000470339 EHMT2Q96KQ7 1210 aa24.4■■□□□ 1.5
COL4A5-203ENST00000470339 FHAD1B1AJZ9 1412 aa24.36■■□□□ 1.49
COL4A5-203ENST00000470339 ADAMTS12P58397 1594 aa24.35■■□□□ 1.49
COL4A5-203ENST00000470339 MAGI1Q96QZ7 1491 aaPredicted RBP24.34■■□□□ 1.49
COL4A5-203ENST00000470339 SNAPC4Q5SXM2 1469 aa24.29■■□□□ 1.48
COL4A5-203ENST00000470339 CEP162Q5TB80 1403 aa24.23■■□□□ 1.47
COL4A5-203ENST00000470339 SYNJ2O15056 1496 aa24.22■■□□□ 1.47
COL4A5-203ENST00000470339 CTTNBP2Q8WZ74 1663 aa24.21■■□□□ 1.47
COL4A5-203ENST00000470339 DNAJC5Q9H3Z4 198 aa24.19■■□□□ 1.46
COL4A5-203ENST00000470339 GRIN2AQ12879 1464 aa24.16■■□□□ 1.46
COL4A5-203ENST00000470339 CLIP1P30622 1438 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms