RNA–Protein interactions for RNA: ENST00000470244.3

RN7SL398P-201, Transcript of RNA, 7SL, cytoplasmic 398, pseudogene, humanhuman

BASIC

Gene RN7SL398P, Length 298 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL398P-201ENST00000470244 NISCHQ9Y2I1 1504 aa28.33■■■□□ 2.13
RN7SL398P-201ENST00000470244 CCDC180Q9P1Z9 1646 aa25.04■■□□□ 1.6
RN7SL398P-201ENST00000470244 ABCC9O60706 1549 aa24.83■■□□□ 1.57
RN7SL398P-201ENST00000470244 DCAF8L2P0C7V8 631 aa23.98■■□□□ 1.43
RN7SL398P-201ENST00000470244 RB1CC1Q8TDY2 1594 aa23.74■■□□□ 1.39
RN7SL398P-201ENST00000470244 NACADO15069 1562 aa23.7■■□□□ 1.38
RN7SL398P-201ENST00000470244 MYO15BQ96JP2 1530 aa23.54■■□□□ 1.36
RN7SL398P-201ENST00000470244 ZCCHC6Q5VYS8 1495 aaKnown RBP23.51■■□□□ 1.35
RN7SL398P-201ENST00000470244 DCAF1Q9Y4B6 1507 aa23.38■■□□□ 1.33
RN7SL398P-201ENST00000470244 PABPN1Q86U42 306 aaKnown RBP eCLIP23.33■■□□□ 1.33
RN7SL398P-201ENST00000470244 DNAJC5BQ9UF47 199 aa23.04■■□□□ 1.28
RN7SL398P-201ENST00000470244 UNC13AQ9UPW8 1703 aa23.01■■□□□ 1.27
RN7SL398P-201ENST00000470244 BICRAQ9NZM4 1560 aa23.01■■□□□ 1.27
RN7SL398P-201ENST00000470244 SCRIBQ14160 1630 aa22.94■■□□□ 1.26
RN7SL398P-201ENST00000470244 SHROOM4Q9ULL8 1493 aa22.75■■□□□ 1.23
RN7SL398P-201ENST00000470244 EIF4G1Q04637 1599 aaKnown RBP22.43■■□□□ 1.18
RN7SL398P-201ENST00000470244 CC2D2AQ9P2K1 1620 aa22.35■■□□□ 1.17
RN7SL398P-201ENST00000470244 CECR2Q9BXF3 1484 aa22.32■■□□□ 1.16
RN7SL398P-201ENST00000470244 NCAPD3P42695 1498 aa21.96■■□□□ 1.11
RN7SL398P-201ENST00000470244 ATAD2BQ9ULI0 1458 aa21.94■■□□□ 1.1
RN7SL398P-201ENST00000470244 BAZ1AQ9NRL2 1556 aaPredicted RBP21.93■■□□□ 1.1
RN7SL398P-201ENST00000470244 SMARCA4P51532 1647 aa21.91■■□□□ 1.1
RN7SL398P-201ENST00000470244 SMARCA2P51531 1590 aa21.84■■□□□ 1.09
RN7SL398P-201ENST00000470244 MROH2BQ7Z745 1585 aa21.82■■□□□ 1.08
RN7SL398P-201ENST00000470244 BAZ1BQ9UIG0 1483 aaKnown RBP21.73■■□□□ 1.07
RN7SL398P-201ENST00000470244 HMGXB3Q12766 1538 aa21.71■■□□□ 1.07
RN7SL398P-201ENST00000470244 PEG3Q9GZU2 1588 aa21.71■■□□□ 1.07
RN7SL398P-201ENST00000470244 RSF1Q96T23 1441 aaPredicted RBP21.62■■□□□ 1.05
RN7SL398P-201ENST00000470244 WIZO95785 1651 aa21.51■■□□□ 1.03
RN7SL398P-201ENST00000470244 NESP48681 1621 aa21.44■■□□□ 1.02
RN7SL398P-201ENST00000470244 ERCC6Q03468 1493 aa21.41■■□□□ 1.02
RN7SL398P-201ENST00000470244 CADPSQ9ULU8 1353 aa21.36■■□□□ 1.01
RN7SL398P-201ENST00000470244 LAMC3Q9Y6N6 1575 aa21.29■■□□□ 1
RN7SL398P-201ENST00000470244 TOP2AP11388 1531 aaKnown RBP21.29■■□□□ 1
RN7SL398P-201ENST00000470244 PDS5BQ9NTI5 1447 aa21.29■■□□□ 1
RN7SL398P-201ENST00000470244 CUX2O14529 1486 aa21.17■□□□□ 0.98
RN7SL398P-201ENST00000470244 CCDC88BA6NC98 1476 aa21.15■□□□□ 0.98
RN7SL398P-201ENST00000470244 CFTRP13569 1480 aa21.15■□□□□ 0.98
RN7SL398P-201ENST00000470244 SUPT5HO00267 1087 aaKnown RBP21.12■□□□□ 0.97
RN7SL398P-201ENST00000470244 FANCD2Q9BXW9 1451 aa21.06■□□□□ 0.96
RN7SL398P-201ENST00000470244 KIF21AQ7Z4S6 1674 aa21■□□□□ 0.95
RN7SL398P-201ENST00000470244 MRC2Q9UBG0 1479 aa21■□□□□ 0.95
RN7SL398P-201ENST00000470244 CEP164Q9UPV0 1460 aa21■□□□□ 0.95
RN7SL398P-201ENST00000470244 THOC2Q8NI27 1593 aaKnown RBP20.98■□□□□ 0.95
RN7SL398P-201ENST00000470244 WDR62O43379 1518 aa20.87■□□□□ 0.93
RN7SL398P-201ENST00000470244 DNAJC5Q9H3Z4 198 aa20.84■□□□□ 0.93
RN7SL398P-201ENST00000470244 URB2Q14146 1524 aaKnown RBP20.82■□□□□ 0.92
RN7SL398P-201ENST00000470244 ABCC8Q09428 1581 aa20.7■□□□□ 0.9
RN7SL398P-201ENST00000470244 TOPBP1Q92547 1522 aa20.67■□□□□ 0.9
RN7SL398P-201ENST00000470244 PRDM2Q13029 1718 aa20.66■□□□□ 0.9
RN7SL398P-201ENST00000470244 IFT140Q96RY7 1462 aa20.6■□□□□ 0.89
RN7SL398P-201ENST00000470244 DNMBPQ6XZF7 1577 aa20.58■□□□□ 0.88
RN7SL398P-201ENST00000470244 ZNF608Q9ULD9 1512 aaPredicted RBP20.52■□□□□ 0.87
RN7SL398P-201ENST00000470244 SOGA1O94964 1423 aa20.52■□□□□ 0.87
RN7SL398P-201ENST00000470244 POLA1P09884 1462 aaPredicted RBP20.5■□□□□ 0.87
RN7SL398P-201ENST00000470244 OSCARQ8IYS5 282 aa20.48■□□□□ 0.87
RN7SL398P-201ENST00000470244 RAD54L2Q9Y4B4 1467 aa20.46■□□□□ 0.87
RN7SL398P-201ENST00000470244 CUX1P39880 1505 aa20.46■□□□□ 0.87
RN7SL398P-201ENST00000470244 AQRO60306 1485 aaKnown RBP eCLIP20.44■□□□□ 0.86
RN7SL398P-201ENST00000470244 TDRD9Q8NDG6 1382 aaKnown RBP20.43■□□□□ 0.86
RN7SL398P-201ENST00000470244 FGD5Q6ZNL6 1462 aa20.43■□□□□ 0.86
RN7SL398P-201ENST00000470244 TARBP1Q13395 1621 aaKnown RBP20.38■□□□□ 0.85
RN7SL398P-201ENST00000470244 WRNQ14191 1432 aaPredicted RBP eCLIP20.36■□□□□ 0.85
RN7SL398P-201ENST00000470244 FBLN2P98095 1184 aa20.33■□□□□ 0.85
RN7SL398P-201ENST00000470244 EIF4G3O43432 1585 aaKnown RBP20.29■□□□□ 0.84
RN7SL398P-201ENST00000470244 CHMP7Q8WUX9 453 aaPredicted RBP20.25■□□□□ 0.83
RN7SL398P-201ENST00000470244 ABCA10Q8WWZ4 1543 aa20.22■□□□□ 0.83
RN7SL398P-201ENST00000470244 TOP2BQ02880 1626 aa20.21■□□□□ 0.83
RN7SL398P-201ENST00000470244 GRIN2BQ13224 1484 aa20.21■□□□□ 0.83
RN7SL398P-201ENST00000470244 GAPVD1Q14C86 1478 aa20.21■□□□□ 0.83
RN7SL398P-201ENST00000470244 SYNJ1O43426 1573 aa20.21■□□□□ 0.83
RN7SL398P-201ENST00000470244 WDR97A6NE52 1622 aa20.18■□□□□ 0.82
RN7SL398P-201ENST00000470244 SNAPC4Q5SXM2 1469 aa20.17■□□□□ 0.82
RN7SL398P-201ENST00000470244 BIVM-ERCC5R4GMW8 1640 aa20.15■□□□□ 0.82
RN7SL398P-201ENST00000470244 MAGI1Q96QZ7 1491 aaPredicted RBP20.13■□□□□ 0.81
RN7SL398P-201ENST00000470244 TRIM41Q8WV44 630 aa20.11■□□□□ 0.81
RN7SL398P-201ENST00000470244 SYNJ2O15056 1496 aa20.08■□□□□ 0.81
RN7SL398P-201ENST00000470244 ABCA5Q8WWZ7 1642 aa20.05■□□□□ 0.8
RN7SL398P-201ENST00000470244 CHD1O14646 1710 aa19.99■□□□□ 0.79
RN7SL398P-201ENST00000470244 FHAD1B1AJZ9 1412 aa19.99■□□□□ 0.79
RN7SL398P-201ENST00000470244 KIF27Q86VH2 1401 aa19.97■□□□□ 0.79
RN7SL398P-201ENST00000470244 CYB5RLQ6IPT4 315 aa19.97■□□□□ 0.79
RN7SL398P-201ENST00000470244 IGF1RP08069 1367 aa19.96■□□□□ 0.79
RN7SL398P-201ENST00000470244 ERICH3Q5RHP9 1530 aa19.96■□□□□ 0.79
RN7SL398P-201ENST00000470244 PBRM1Q86U86 1689 aa19.94■□□□□ 0.78
RN7SL398P-201ENST00000470244 ARHGEF11O15085 1522 aa19.94■□□□□ 0.78
RN7SL398P-201ENST00000470244 GRIN2AQ12879 1464 aa19.92■□□□□ 0.78
RN7SL398P-201ENST00000470244 RIMBP3CA6NJZ7 1639 aa19.9■□□□□ 0.78
RN7SL398P-201ENST00000470244 RIMBP3BA6NNM3 1639 aa19.9■□□□□ 0.78
RN7SL398P-201ENST00000470244 RIMBP3Q9UFD9 1639 aa19.9■□□□□ 0.78
RN7SL398P-201ENST00000470244 CLASP1Q7Z460 1538 aa19.88■□□□□ 0.77
RN7SL398P-201ENST00000470244 ADAMTS12P58397 1594 aa19.87■□□□□ 0.77
RN7SL398P-201ENST00000470244 NUP160Q12769 1436 aa19.85■□□□□ 0.77
RN7SL398P-201ENST00000470244 CARMIL1Q5VZK9 1371 aa19.83■□□□□ 0.76
RN7SL398P-201ENST00000470244 JPH4Q96JJ6 628 aa19.81■□□□□ 0.76
RN7SL398P-201ENST00000470244 ARAP1Q96P48 1450 aa19.78■□□□□ 0.76
RN7SL398P-201ENST00000470244 CEP170Q5SW79 1584 aa19.77■□□□□ 0.76
RN7SL398P-201ENST00000470244 RUSC2Q8N2Y8 1516 aa19.74■□□□□ 0.75
RN7SL398P-201ENST00000470244 PRG4Q92954 1404 aaPredicted RBP19.69■□□□□ 0.74
RN7SL398P-201ENST00000470244 KIAA0586Q9BVV6 1533 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms