RNA–Protein interactions for RNA: ENST00000470229.5

NUB1-204, Transcript of negative regulator of ubiquitin like proteins 1, humanhuman

TSL 2

Gene NUB1, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUB1-204ENST00000470229 NISCHQ9Y2I1 1504 aa50.52■■■■■ 5.68
NUB1-204ENST00000470229 CCDC180Q9P1Z9 1646 aa44.64■■■■■ 4.74
NUB1-204ENST00000470229 ABCC9O60706 1549 aa42.9■■■■■ 4.46
NUB1-204ENST00000470229 ZCCHC6Q5VYS8 1495 aaKnown RBP42.24■■■■■ 4.35
NUB1-204ENST00000470229 DCAF1Q9Y4B6 1507 aa41.89■■■■■ 4.3
NUB1-204ENST00000470229 DCAF8L2P0C7V8 631 aa41.82■■■■■ 4.29
NUB1-204ENST00000470229 MYO15BQ96JP2 1530 aa41.81■■■■■ 4.28
NUB1-204ENST00000470229 NACADO15069 1562 aa41.79■■■■■ 4.28
NUB1-204ENST00000470229 RB1CC1Q8TDY2 1594 aa41.64■■■■■ 4.26
NUB1-204ENST00000470229 SCRIBQ14160 1630 aa40.71■■■■■ 4.11
NUB1-204ENST00000470229 UNC13AQ9UPW8 1703 aa40.71■■■■■ 4.11
NUB1-204ENST00000470229 BICRAQ9NZM4 1560 aa40.35■■■■■ 4.05
NUB1-204ENST00000470229 SHROOM4Q9ULL8 1493 aa40.26■■■■■ 4.03
NUB1-204ENST00000470229 PABPN1Q86U42 306 aaKnown RBP eCLIP40.19■■■■■ 4.02
NUB1-204ENST00000470229 CECR2Q9BXF3 1484 aa39.24■■■■□ 3.87
NUB1-204ENST00000470229 EIF4G1Q04637 1599 aaKnown RBP39.21■■■■□ 3.87
NUB1-204ENST00000470229 BAZ1AQ9NRL2 1556 aaPredicted RBP39.12■■■■□ 3.85
NUB1-204ENST00000470229 SMARCA4P51532 1647 aa39.05■■■■□ 3.84
NUB1-204ENST00000470229 MROH2BQ7Z745 1585 aa38.93■■■■□ 3.82
NUB1-204ENST00000470229 CC2D2AQ9P2K1 1620 aa38.87■■■■□ 3.81
NUB1-204ENST00000470229 RSF1Q96T23 1441 aaPredicted RBP38.75■■■■□ 3.79
NUB1-204ENST00000470229 DNAJC5BQ9UF47 199 aa38.71■■■■□ 3.79
NUB1-204ENST00000470229 PEG3Q9GZU2 1588 aa38.69■■■■□ 3.78
NUB1-204ENST00000470229 SMARCA2P51531 1590 aa38.66■■■■□ 3.78
NUB1-204ENST00000470229 ATAD2BQ9ULI0 1458 aa38.65■■■■□ 3.78
NUB1-204ENST00000470229 WIZO95785 1651 aa38.55■■■■□ 3.76
NUB1-204ENST00000470229 NCAPD3P42695 1498 aa38.54■■■■□ 3.76
NUB1-204ENST00000470229 HMGXB3Q12766 1538 aa38.43■■■■□ 3.74
NUB1-204ENST00000470229 BAZ1BQ9UIG0 1483 aaKnown RBP38.36■■■■□ 3.73
NUB1-204ENST00000470229 SUPT5HO00267 1087 aaKnown RBP38.25■■■■□ 3.71
NUB1-204ENST00000470229 TOP2AP11388 1531 aaKnown RBP38.2■■■■□ 3.71
NUB1-204ENST00000470229 CCDC88BA6NC98 1476 aa37.73■■■■□ 3.63
NUB1-204ENST00000470229 CADPSQ9ULU8 1353 aa37.44■■■■□ 3.58
NUB1-204ENST00000470229 LAMC3Q9Y6N6 1575 aa37.42■■■■□ 3.58
NUB1-204ENST00000470229 CFTRP13569 1480 aa37.38■■■■□ 3.57
NUB1-204ENST00000470229 NESP48681 1621 aa37.34■■■■□ 3.57
NUB1-204ENST00000470229 PRDM2Q13029 1718 aa37.19■■■■□ 3.54
NUB1-204ENST00000470229 PDS5BQ9NTI5 1447 aa37.11■■■■□ 3.53
NUB1-204ENST00000470229 FANCD2Q9BXW9 1451 aa37■■■■□ 3.51
NUB1-204ENST00000470229 KIF21AQ7Z4S6 1674 aa36.95■■■■□ 3.51
NUB1-204ENST00000470229 ERCC6Q03468 1493 aa36.92■■■■□ 3.5
NUB1-204ENST00000470229 CEP164Q9UPV0 1460 aa36.88■■■■□ 3.5
NUB1-204ENST00000470229 MRC2Q9UBG0 1479 aa36.69■■■■□ 3.46
NUB1-204ENST00000470229 THOC2Q8NI27 1593 aaKnown RBP36.66■■■■□ 3.46
NUB1-204ENST00000470229 URB2Q14146 1524 aaKnown RBP36.59■■■■□ 3.45
NUB1-204ENST00000470229 ABCC8Q09428 1581 aa36.57■■■■□ 3.45
NUB1-204ENST00000470229 WDR62O43379 1518 aa36.55■■■■□ 3.44
NUB1-204ENST00000470229 DNMBPQ6XZF7 1577 aa36.53■■■■□ 3.44
NUB1-204ENST00000470229 WRNQ14191 1432 aaPredicted RBP eCLIP36.52■■■■□ 3.44
NUB1-204ENST00000470229 TOPBP1Q92547 1522 aa36.49■■■■□ 3.43
NUB1-204ENST00000470229 CUX1P39880 1505 aa36.49■■■■□ 3.43
NUB1-204ENST00000470229 TOP2BQ02880 1626 aa36.38■■■■□ 3.41
NUB1-204ENST00000470229 BIVM-ERCC5R4GMW8 1640 aa36.38■■■■□ 3.41
NUB1-204ENST00000470229 SYNJ1O43426 1573 aa36.38■■■■□ 3.41
NUB1-204ENST00000470229 CUX2O14529 1486 aa36.32■■■■□ 3.41
NUB1-204ENST00000470229 FGD5Q6ZNL6 1462 aa36.24■■■■□ 3.39
NUB1-204ENST00000470229 POLA1P09884 1462 aaPredicted RBP36.23■■■■□ 3.39
NUB1-204ENST00000470229 CHIC1Q5VXU3 224 aa36.17■■■■□ 3.38
NUB1-204ENST00000470229 TRIM41Q8WV44 630 aa36.12■■■■□ 3.37
NUB1-204ENST00000470229 IFT140Q96RY7 1462 aa36.1■■■■□ 3.37
NUB1-204ENST00000470229 SOGA1O94964 1423 aa36.09■■■■□ 3.37
NUB1-204ENST00000470229 TARBP1Q13395 1621 aaKnown RBP36.05■■■■□ 3.36
NUB1-204ENST00000470229 RAD54L2Q9Y4B4 1467 aa36.04■■■■□ 3.36
NUB1-204ENST00000470229 ABCA10Q8WWZ4 1543 aa35.96■■■■□ 3.35
NUB1-204ENST00000470229 WDR97A6NE52 1622 aa35.94■■■■□ 3.34
NUB1-204ENST00000470229 ZNF608Q9ULD9 1512 aaPredicted RBP35.83■■■■□ 3.33
NUB1-204ENST00000470229 TDRD9Q8NDG6 1382 aaKnown RBP35.77■■■■□ 3.32
NUB1-204ENST00000470229 EIF4G3O43432 1585 aaKnown RBP35.75■■■■□ 3.31
NUB1-204ENST00000470229 ABCA5Q8WWZ7 1642 aa35.74■■■■□ 3.31
NUB1-204ENST00000470229 AQRO60306 1485 aaKnown RBP eCLIP35.72■■■■□ 3.315e-7■■□□□ 12.3
NUB1-204ENST00000470229 KIF27Q86VH2 1401 aa35.71■■■■□ 3.31
NUB1-204ENST00000470229 GAPVD1Q14C86 1478 aa35.69■■■■□ 3.3
NUB1-204ENST00000470229 GRIN2BQ13224 1484 aa35.6■■■■□ 3.29
NUB1-204ENST00000470229 PBRM1Q86U86 1689 aa35.59■■■■□ 3.29
NUB1-204ENST00000470229 RUSC2Q8N2Y8 1516 aa35.57■■■■□ 3.28
NUB1-204ENST00000470229 EEA1Q15075 1411 aa35.55■■■■□ 3.28
NUB1-204ENST00000470229 ERICH3Q5RHP9 1530 aa35.54■■■■□ 3.28
NUB1-204ENST00000470229 IGF1RP08069 1367 aa35.47■■■■□ 3.27
NUB1-204ENST00000470229 MAGI1Q96QZ7 1491 aaPredicted RBP35.44■■■■□ 3.26
NUB1-204ENST00000470229 SNAPC4Q5SXM2 1469 aa35.42■■■■□ 3.26
NUB1-204ENST00000470229 CUL7Q14999 1698 aa35.37■■■■□ 3.25
NUB1-204ENST00000470229 CSRNP3Q8WYN3 585 aa35.35■■■■□ 3.25
NUB1-204ENST00000470229 ADAMTS12P58397 1594 aa35.34■■■■□ 3.25
NUB1-204ENST00000470229 FHAD1B1AJZ9 1412 aa35.32■■■■□ 3.25
NUB1-204ENST00000470229 FAM9AQ8IZU1 332 aaPredicted RBP35.31■■■■□ 3.24
NUB1-204ENST00000470229 CARMIL1Q5VZK9 1371 aa35.28■■■■□ 3.24
NUB1-204ENST00000470229 SYNJ2O15056 1496 aa35.28■■■■□ 3.24
NUB1-204ENST00000470229 PRXQ9BXM0 1461 aa35.22■■■■□ 3.23
NUB1-204ENST00000470229 CHMP7Q8WUX9 453 aaPredicted RBP35.18■■■■□ 3.22
NUB1-204ENST00000470229 CHD1O14646 1710 aa35.18■■■■□ 3.22
NUB1-204ENST00000470229 RAPGEF2Q9Y4G8 1499 aa35.16■■■■□ 3.22
NUB1-204ENST00000470229 GRIN2AQ12879 1464 aa35.13■■■■□ 3.21
NUB1-204ENST00000470229 FBLN2P98095 1184 aa35.12■■■■□ 3.21
NUB1-204ENST00000470229 KIF21BO75037 1637 aa35.1■■■■□ 3.21
NUB1-204ENST00000470229 NUP160Q12769 1436 aa34.97■■■■□ 3.19
NUB1-204ENST00000470229 GOLGA3Q08378 1498 aa34.93■■■■□ 3.18
NUB1-204ENST00000470229 OSCARQ8IYS5 282 aa34.93■■■■□ 3.18
NUB1-204ENST00000470229 CEP170Q5SW79 1584 aa34.91■■■■□ 3.18
NUB1-204ENST00000470229 CLASP1Q7Z460 1538 aa34.81■■■■□ 3.16
NUB1-204ENST00000470229 KIAA0586Q9BVV6 1533 aa34.81■■■■□ 3.16
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms