RNA–Protein interactions for RNA: ENST00000469988.3

RN7SL233P-201, Transcript of RNA, 7SL, cytoplasmic 233, pseudogene, humanhuman

BASIC

Gene RN7SL233P, Length 277 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL233P-201ENST00000469988 NISCHQ9Y2I1 1504 aa17.99■□□□□ 0.47
RN7SL233P-201ENST00000469988 CCDC180Q9P1Z9 1646 aa16.01■□□□□ 0.15
RN7SL233P-201ENST00000469988 ABCC9O60706 1549 aa15.45■□□□□ 0.06
RN7SL233P-201ENST00000469988 ZCCHC6Q5VYS8 1495 aaKnown RBP15.04■□□□□ -0
RN7SL233P-201ENST00000469988 NACADO15069 1562 aa14.98□□□□□ -0.01
RN7SL233P-201ENST00000469988 RB1CC1Q8TDY2 1594 aa14.97□□□□□ -0.01
RN7SL233P-201ENST00000469988 MYO15BQ96JP2 1530 aa14.95□□□□□ -0.02
RN7SL233P-201ENST00000469988 DCAF1Q9Y4B6 1507 aa14.93□□□□□ -0.02
RN7SL233P-201ENST00000469988 DCAF8L2P0C7V8 631 aa14.84□□□□□ -0.03
RN7SL233P-201ENST00000469988 UNC13AQ9UPW8 1703 aa14.66□□□□□ -0.06
RN7SL233P-201ENST00000469988 SCRIBQ14160 1630 aa14.56□□□□□ -0.08
RN7SL233P-201ENST00000469988 BICRAQ9NZM4 1560 aa14.51□□□□□ -0.09
RN7SL233P-201ENST00000469988 SHROOM4Q9ULL8 1493 aa14.41□□□□□ -0.1
RN7SL233P-201ENST00000469988 PABPN1Q86U42 306 aaKnown RBP eCLIP14.4□□□□□ -0.1
RN7SL233P-201ENST00000469988 EIF4G1Q04637 1599 aaKnown RBP14.11□□□□□ -0.15
RN7SL233P-201ENST00000469988 CC2D2AQ9P2K1 1620 aa14.02□□□□□ -0.16
RN7SL233P-201ENST00000469988 DNAJC5BQ9UF47 199 aa14□□□□□ -0.17
RN7SL233P-201ENST00000469988 CECR2Q9BXF3 1484 aa13.97□□□□□ -0.17
RN7SL233P-201ENST00000469988 SMARCA4P51532 1647 aa13.96□□□□□ -0.17
RN7SL233P-201ENST00000469988 BAZ1AQ9NRL2 1556 aaPredicted RBP13.96□□□□□ -0.18
RN7SL233P-201ENST00000469988 MROH2BQ7Z745 1585 aa13.86□□□□□ -0.19
RN7SL233P-201ENST00000469988 SMARCA2P51531 1590 aa13.83□□□□□ -0.19
RN7SL233P-201ENST00000469988 PEG3Q9GZU2 1588 aa13.83□□□□□ -0.19
RN7SL233P-201ENST00000469988 ATAD2BQ9ULI0 1458 aa13.82□□□□□ -0.2
RN7SL233P-201ENST00000469988 NCAPD3P42695 1498 aa13.79□□□□□ -0.2
RN7SL233P-201ENST00000469988 HMGXB3Q12766 1538 aa13.78□□□□□ -0.2
RN7SL233P-201ENST00000469988 RSF1Q96T23 1441 aaPredicted RBP13.73□□□□□ -0.21
RN7SL233P-201ENST00000469988 WIZO95785 1651 aa13.72□□□□□ -0.21
RN7SL233P-201ENST00000469988 BAZ1BQ9UIG0 1483 aaKnown RBP13.71□□□□□ -0.21
RN7SL233P-201ENST00000469988 TOP2AP11388 1531 aaKnown RBP13.61□□□□□ -0.23
RN7SL233P-201ENST00000469988 SUPT5HO00267 1087 aaKnown RBP13.48□□□□□ -0.25
RN7SL233P-201ENST00000469988 LAMC3Q9Y6N6 1575 aa13.44□□□□□ -0.26
RN7SL233P-201ENST00000469988 NESP48681 1621 aa13.4□□□□□ -0.26
RN7SL233P-201ENST00000469988 CCDC88BA6NC98 1476 aa13.4□□□□□ -0.26
RN7SL233P-201ENST00000469988 CADPSQ9ULU8 1353 aa13.37□□□□□ -0.27
RN7SL233P-201ENST00000469988 CFTRP13569 1480 aa13.36□□□□□ -0.27
RN7SL233P-201ENST00000469988 PRDM2Q13029 1718 aa13.35□□□□□ -0.27
RN7SL233P-201ENST00000469988 ERCC6Q03468 1493 aa13.32□□□□□ -0.28
RN7SL233P-201ENST00000469988 KIF21AQ7Z4S6 1674 aa13.31□□□□□ -0.28
RN7SL233P-201ENST00000469988 PDS5BQ9NTI5 1447 aa13.3□□□□□ -0.28
RN7SL233P-201ENST00000469988 THOC2Q8NI27 1593 aaKnown RBP13.24□□□□□ -0.29
RN7SL233P-201ENST00000469988 FANCD2Q9BXW9 1451 aa13.24□□□□□ -0.29
RN7SL233P-201ENST00000469988 CEP164Q9UPV0 1460 aa13.23□□□□□ -0.29
RN7SL233P-201ENST00000469988 MRC2Q9UBG0 1479 aa13.18□□□□□ -0.3
RN7SL233P-201ENST00000469988 WDR62O43379 1518 aa13.16□□□□□ -0.3
RN7SL233P-201ENST00000469988 CUX2O14529 1486 aa13.16□□□□□ -0.3
RN7SL233P-201ENST00000469988 URB2Q14146 1524 aaKnown RBP13.11□□□□□ -0.31
RN7SL233P-201ENST00000469988 DNMBPQ6XZF7 1577 aa13.07□□□□□ -0.32
RN7SL233P-201ENST00000469988 ABCC8Q09428 1581 aa13.06□□□□□ -0.32
RN7SL233P-201ENST00000469988 TOPBP1Q92547 1522 aa13.05□□□□□ -0.32
RN7SL233P-201ENST00000469988 CUX1P39880 1505 aa13□□□□□ -0.33
RN7SL233P-201ENST00000469988 BIVM-ERCC5R4GMW8 1640 aa12.96□□□□□ -0.33
RN7SL233P-201ENST00000469988 POLA1P09884 1462 aaPredicted RBP12.96□□□□□ -0.34
RN7SL233P-201ENST00000469988 WRNQ14191 1432 aaPredicted RBP eCLIP12.95□□□□□ -0.34
RN7SL233P-201ENST00000469988 TOP2BQ02880 1626 aa12.95□□□□□ -0.34
RN7SL233P-201ENST00000469988 IFT140Q96RY7 1462 aa12.94□□□□□ -0.34
RN7SL233P-201ENST00000469988 SYNJ1O43426 1573 aa12.94□□□□□ -0.34
RN7SL233P-201ENST00000469988 FGD5Q6ZNL6 1462 aa12.93□□□□□ -0.34
RN7SL233P-201ENST00000469988 TARBP1Q13395 1621 aaKnown RBP12.92□□□□□ -0.34
RN7SL233P-201ENST00000469988 WDR97A6NE52 1622 aa12.88□□□□□ -0.35
RN7SL233P-201ENST00000469988 EIF4G3O43432 1585 aaKnown RBP12.86□□□□□ -0.35
RN7SL233P-201ENST00000469988 RAD54L2Q9Y4B4 1467 aa12.86□□□□□ -0.35
RN7SL233P-201ENST00000469988 ZNF608Q9ULD9 1512 aaPredicted RBP12.86□□□□□ -0.35
RN7SL233P-201ENST00000469988 SOGA1O94964 1423 aa12.86□□□□□ -0.35
RN7SL233P-201ENST00000469988 ABCA10Q8WWZ4 1543 aa12.83□□□□□ -0.35
RN7SL233P-201ENST00000469988 ABCA5Q8WWZ7 1642 aa12.8□□□□□ -0.36
RN7SL233P-201ENST00000469988 AQRO60306 1485 aaKnown RBP eCLIP12.78□□□□□ -0.36
RN7SL233P-201ENST00000469988 PBRM1Q86U86 1689 aa12.77□□□□□ -0.37
RN7SL233P-201ENST00000469988 TDRD9Q8NDG6 1382 aaKnown RBP12.76□□□□□ -0.37
RN7SL233P-201ENST00000469988 TRIM41Q8WV44 630 aa12.75□□□□□ -0.37
RN7SL233P-201ENST00000469988 GAPVD1Q14C86 1478 aa12.74□□□□□ -0.37
RN7SL233P-201ENST00000469988 GRIN2BQ13224 1484 aa12.73□□□□□ -0.37
RN7SL233P-201ENST00000469988 MAGI1Q96QZ7 1491 aaPredicted RBP12.71□□□□□ -0.38
RN7SL233P-201ENST00000469988 SNAPC4Q5SXM2 1469 aa12.7□□□□□ -0.38
RN7SL233P-201ENST00000469988 ERICH3Q5RHP9 1530 aa12.69□□□□□ -0.38
RN7SL233P-201ENST00000469988 CHD1O14646 1710 aa12.68□□□□□ -0.38
RN7SL233P-201ENST00000469988 ADAMTS12P58397 1594 aa12.66□□□□□ -0.38
RN7SL233P-201ENST00000469988 KIF27Q86VH2 1401 aa12.66□□□□□ -0.38
RN7SL233P-201ENST00000469988 SYNJ2O15056 1496 aa12.64□□□□□ -0.39
RN7SL233P-201ENST00000469988 CUL7Q14999 1698 aa12.62□□□□□ -0.39
RN7SL233P-201ENST00000469988 CHIC1Q5VXU3 224 aa12.62□□□□□ -0.39
RN7SL233P-201ENST00000469988 FHAD1B1AJZ9 1412 aa12.6□□□□□ -0.39
RN7SL233P-201ENST00000469988 GRIN2AQ12879 1464 aa12.58□□□□□ -0.4
RN7SL233P-201ENST00000469988 IGF1RP08069 1367 aa12.56□□□□□ -0.4
RN7SL233P-201ENST00000469988 RUSC2Q8N2Y8 1516 aa12.56□□□□□ -0.4
RN7SL233P-201ENST00000469988 FBLN2P98095 1184 aa12.55□□□□□ -0.4
RN7SL233P-201ENST00000469988 OSCARQ8IYS5 282 aa12.55□□□□□ -0.4
RN7SL233P-201ENST00000469988 CHMP7Q8WUX9 453 aaPredicted RBP12.55□□□□□ -0.4
RN7SL233P-201ENST00000469988 CLASP1Q7Z460 1538 aa12.53□□□□□ -0.4
RN7SL233P-201ENST00000469988 DNAJC5Q9H3Z4 198 aa12.53□□□□□ -0.4
RN7SL233P-201ENST00000469988 EEA1Q15075 1411 aa12.53□□□□□ -0.4
RN7SL233P-201ENST00000469988 NUP160Q12769 1436 aa12.52□□□□□ -0.41
RN7SL233P-201ENST00000469988 CEP170Q5SW79 1584 aa12.52□□□□□ -0.41
RN7SL233P-201ENST00000469988 CARMIL1Q5VZK9 1371 aa12.5□□□□□ -0.41
RN7SL233P-201ENST00000469988 PRXQ9BXM0 1461 aa12.46□□□□□ -0.41
RN7SL233P-201ENST00000469988 RAPGEF2Q9Y4G8 1499 aa12.46□□□□□ -0.41
RN7SL233P-201ENST00000469988 FAM9AQ8IZU1 332 aaPredicted RBP12.46□□□□□ -0.41
RN7SL233P-201ENST00000469988 SHROOM2Q13796 1616 aa12.44□□□□□ -0.42
RN7SL233P-201ENST00000469988 ARHGEF11O15085 1522 aa12.42□□□□□ -0.42
RN7SL233P-201ENST00000469988 RIMBP3CA6NJZ7 1639 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms