RNA–Protein interactions for RNA: ENST00000469896.1

COMMD2-202, Transcript of COMM domain containing 2, humanhuman

TSL 1 (best)

Gene COMMD2, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD2-202ENST00000469896 AEBP2Q6ZN18 517 aaPredicted RBP31.7■■■□□ 2.67
COMMD2-202ENST00000469896 CHIC1Q5VXU3 224 aa30.18■■■□□ 2.42
COMMD2-202ENST00000469896 NISCHQ9Y2I1 1504 aa29.18■■■□□ 2.26
COMMD2-202ENST00000469896 ABCC9O60706 1549 aa27.56■■■□□ 2
COMMD2-202ENST00000469896 SENP3Q9H4L4 574 aaPredicted RBP26.9■■□□□ 1.9
COMMD2-202ENST00000469896 DNAJC5BQ9UF47 199 aa26.64■■□□□ 1.86
COMMD2-202ENST00000469896 PHF23Q9BUL5 403 aaPredicted RBP26.62■■□□□ 1.85
COMMD2-202ENST00000469896 CCDC180Q9P1Z9 1646 aa26.59■■□□□ 1.85
COMMD2-202ENST00000469896 RB1CC1Q8TDY2 1594 aa25.83■■□□□ 1.73
COMMD2-202ENST00000469896 PABPN1Q86U42 306 aaKnown RBP eCLIP25.51■■□□□ 1.67
COMMD2-202ENST00000469896 NACADO15069 1562 aa25.42■■□□□ 1.66
COMMD2-202ENST00000469896 DNAJC5Q9H3Z4 198 aa25.28■■□□□ 1.64
COMMD2-202ENST00000469896 DCAF8L2P0C7V8 631 aa25.14■■□□□ 1.62
COMMD2-202ENST00000469896 FOXD1Q16676 465 aa25.13■■□□□ 1.61
COMMD2-202ENST00000469896 UNC13AQ9UPW8 1703 aa25.04■■□□□ 1.6
COMMD2-202ENST00000469896 BICRAQ9NZM4 1560 aa25.01■■□□□ 1.59
COMMD2-202ENST00000469896 CECR2Q9BXF3 1484 aa24.96■■□□□ 1.59
COMMD2-202ENST00000469896 CC2D2AQ9P2K1 1620 aa24.81■■□□□ 1.56
COMMD2-202ENST00000469896 MYO15BQ96JP2 1530 aa24.76■■□□□ 1.55
COMMD2-202ENST00000469896 SHROOM4Q9ULL8 1493 aa24.74■■□□□ 1.55
COMMD2-202ENST00000469896 EIF4G1Q04637 1599 aaKnown RBP24.54■■□□□ 1.52
COMMD2-202ENST00000469896 CUX2O14529 1486 aa24.2■■□□□ 1.47
COMMD2-202ENST00000469896 SCRIBQ14160 1630 aa24.16■■□□□ 1.46
COMMD2-202ENST00000469896 PLPPR3Q6T4P5 718 aa24.12■■□□□ 1.45
COMMD2-202ENST00000469896 DCAF1Q9Y4B6 1507 aa24.07■■□□□ 1.44
COMMD2-202ENST00000469896 ZCCHC6Q5VYS8 1495 aaKnown RBP23.97■■□□□ 1.43
COMMD2-202ENST00000469896 ERCC6Q03468 1493 aa23.95■■□□□ 1.42
COMMD2-202ENST00000469896 TRIM41Q8WV44 630 aa23.79■■□□□ 1.4
COMMD2-202ENST00000469896 PPP6R1Q9UPN7 881 aa23.65■■□□□ 1.38
COMMD2-202ENST00000469896 ADRA2BP18089 450 aa23.53■■□□□ 1.36
COMMD2-202ENST00000469896 NCAPD3P42695 1498 aa23.48■■□□□ 1.35
COMMD2-202ENST00000469896 PIAS4Q8N2W9 510 aaPredicted RBP23.44■■□□□ 1.34
COMMD2-202ENST00000469896 MSH5O43196 834 aa23.37■■□□□ 1.33
COMMD2-202ENST00000469896 NESP48681 1621 aa23.35■■□□□ 1.33
COMMD2-202ENST00000469896 THOC2Q8NI27 1593 aaKnown RBP23.3■■□□□ 1.32
COMMD2-202ENST00000469896 ATAD2BQ9ULI0 1458 aa23.25■■□□□ 1.31
COMMD2-202ENST00000469896 HMGXB3Q12766 1538 aa23.21■■□□□ 1.31
COMMD2-202ENST00000469896 SMARCA2P51531 1590 aa23.18■■□□□ 1.3
COMMD2-202ENST00000469896 LAMC3Q9Y6N6 1575 aa23.1■■□□□ 1.29
COMMD2-202ENST00000469896 PDS5BQ9NTI5 1447 aa23.07■■□□□ 1.28
COMMD2-202ENST00000469896 BAZ1BQ9UIG0 1483 aaKnown RBP23.01■■□□□ 1.27
COMMD2-202ENST00000469896 OSCARQ8IYS5 282 aa22.97■■□□□ 1.27
COMMD2-202ENST00000469896 KIF21AQ7Z4S6 1674 aa22.97■■□□□ 1.27
COMMD2-202ENST00000469896 SMARCA4P51532 1647 aa22.94■■□□□ 1.26
COMMD2-202ENST00000469896 BAZ1AQ9NRL2 1556 aaPredicted RBP22.93■■□□□ 1.26
COMMD2-202ENST00000469896 MRC2Q9UBG0 1479 aa22.88■■□□□ 1.25
COMMD2-202ENST00000469896 WDR62O43379 1518 aa22.82■■□□□ 1.24
COMMD2-202ENST00000469896 PEG3Q9GZU2 1588 aa22.75■■□□□ 1.23
COMMD2-202ENST00000469896 CADPSQ9ULU8 1353 aa22.74■■□□□ 1.23
COMMD2-202ENST00000469896 RIMBP3CA6NJZ7 1639 aa22.65■■□□□ 1.22
COMMD2-202ENST00000469896 RIMBP3BA6NNM3 1639 aa22.65■■□□□ 1.22
COMMD2-202ENST00000469896 RIMBP3Q9UFD9 1639 aa22.65■■□□□ 1.22
COMMD2-202ENST00000469896 POTEDQ86YR6 584 aa22.65■■□□□ 1.22
COMMD2-202ENST00000469896 CEP164Q9UPV0 1460 aa22.6■■□□□ 1.21
COMMD2-202ENST00000469896 TRHP20396 242 aaPredicted RBP22.58■■□□□ 1.21
COMMD2-202ENST00000469896 ARHGEF11O15085 1522 aa22.53■■□□□ 1.2
COMMD2-202ENST00000469896 CYB5RLQ6IPT4 315 aa22.47■■□□□ 1.19
COMMD2-202ENST00000469896 FANCD2Q9BXW9 1451 aa22.47■■□□□ 1.19
COMMD2-202ENST00000469896 MROH2BQ7Z745 1585 aa22.44■■□□□ 1.18
COMMD2-202ENST00000469896 URB2Q14146 1524 aaKnown RBP22.29■■□□□ 1.16
COMMD2-202ENST00000469896 CFTRP13569 1480 aa22.26■■□□□ 1.15
COMMD2-202ENST00000469896 ARAP1Q96P48 1450 aa22.22■■□□□ 1.15
COMMD2-202ENST00000469896 IFT140Q96RY7 1462 aa22.19■■□□□ 1.14
COMMD2-202ENST00000469896 ZNF608Q9ULD9 1512 aaPredicted RBP22.18■■□□□ 1.14
COMMD2-202ENST00000469896 RSF1Q96T23 1441 aaPredicted RBP22.14■■□□□ 1.13
COMMD2-202ENST00000469896 WIZO95785 1651 aa22.08■■□□□ 1.13
COMMD2-202ENST00000469896 FBLN2P98095 1184 aa22.02■■□□□ 1.12
COMMD2-202ENST00000469896 EIF4G3O43432 1585 aaKnown RBP22■■□□□ 1.11
COMMD2-202ENST00000469896 CHD1O14646 1710 aa21.97■■□□□ 1.11
COMMD2-202ENST00000469896 TOPBP1Q92547 1522 aa21.9■■□□□ 1.1
COMMD2-202ENST00000469896 AQRO60306 1485 aaKnown RBP eCLIP21.88■■□□□ 1.09
COMMD2-202ENST00000469896 ABCC8Q09428 1581 aa21.87■■□□□ 1.09
COMMD2-202ENST00000469896 PRDM2Q13029 1718 aa21.83■■□□□ 1.09
COMMD2-202ENST00000469896 TOP2AP11388 1531 aaKnown RBP21.81■■□□□ 1.08
COMMD2-202ENST00000469896 DNMBPQ6XZF7 1577 aa21.75■■□□□ 1.07
COMMD2-202ENST00000469896 ILDR1Q86SU0 546 aaPredicted RBP21.75■■□□□ 1.07
COMMD2-202ENST00000469896 CLASP1Q7Z460 1538 aa21.75■■□□□ 1.07
COMMD2-202ENST00000469896 TARBP1Q13395 1621 aaKnown RBP21.74■■□□□ 1.07
COMMD2-202ENST00000469896 SYNJ1O43426 1573 aa21.71■■□□□ 1.07
COMMD2-202ENST00000469896 CHMP7Q8WUX9 453 aaPredicted RBP21.71■■□□□ 1.07
COMMD2-202ENST00000469896 GAPVD1Q14C86 1478 aa21.66■■□□□ 1.06
COMMD2-202ENST00000469896 SNAPC4Q5SXM2 1469 aa21.64■■□□□ 1.06
COMMD2-202ENST00000469896 POLA1P09884 1462 aaPredicted RBP21.63■■□□□ 1.05
COMMD2-202ENST00000469896 TDRD9Q8NDG6 1382 aaKnown RBP21.61■■□□□ 1.05
COMMD2-202ENST00000469896 MAPK8IP2Q13387 824 aaPredicted RBP21.59■■□□□ 1.05
COMMD2-202ENST00000469896 MAGI1Q96QZ7 1491 aaPredicted RBP21.58■■□□□ 1.05
COMMD2-202ENST00000469896 CCDC88BA6NC98 1476 aa21.57■■□□□ 1.04
COMMD2-202ENST00000469896 SOGA1O94964 1423 aa21.55■■□□□ 1.04
COMMD2-202ENST00000469896 RAD54L2Q9Y4B4 1467 aa21.54■■□□□ 1.04
COMMD2-202ENST00000469896 WDR97A6NE52 1622 aa21.54■■□□□ 1.04
COMMD2-202ENST00000469896 SYNJ2O15056 1496 aa21.52■■□□□ 1.04
COMMD2-202ENST00000469896 GRIN2BQ13224 1484 aa21.48■■□□□ 1.03
COMMD2-202ENST00000469896 SCAF1Q9H7N4 1312 aaKnown RBP21.42■■□□□ 1.02
COMMD2-202ENST00000469896 DMRT2Q9Y5R5 561 aa21.4■■□□□ 1.02
COMMD2-202ENST00000469896 KDM4FA0A1W2PPD8 638 aa21.37■■□□□ 1.01
COMMD2-202ENST00000469896 FGD5Q6ZNL6 1462 aa21.35■■□□□ 1.01
COMMD2-202ENST00000469896 KIF13AQ9H1H9 1805 aa21.29■■□□□ 1
COMMD2-202ENST00000469896 ERCC6L2Q5T890 1561 aa21.29■■□□□ 1
COMMD2-202ENST00000469896 FAM69CQ0P6D2 419 aa21.26■□□□□ 0.99
COMMD2-202ENST00000469896 CEP170Q5SW79 1584 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms