RNA–Protein interactions for RNA: ENST00000469793.1

RAD18-208, Transcript of RAD18, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene RAD18, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD18-208ENST00000469793 NISCHQ9Y2I1 1504 aa34.45■■■■□ 3.1
RAD18-208ENST00000469793 CCDC180Q9P1Z9 1646 aa30.54■■■□□ 2.48
RAD18-208ENST00000469793 ABCC9O60706 1549 aa29.35■■■□□ 2.29
RAD18-208ENST00000469793 ZCCHC6Q5VYS8 1495 aaKnown RBP28.81■■■□□ 2.2
RAD18-208ENST00000469793 DCAF1Q9Y4B6 1507 aa28.59■■■□□ 2.17
RAD18-208ENST00000469793 NACADO15069 1562 aa28.58■■■□□ 2.17
RAD18-208ENST00000469793 MYO15BQ96JP2 1530 aa28.57■■■□□ 2.16
RAD18-208ENST00000469793 RB1CC1Q8TDY2 1594 aa28.5■■■□□ 2.15
RAD18-208ENST00000469793 DCAF8L2P0C7V8 631 aa28.41■■■□□ 2.14
RAD18-208ENST00000469793 UNC13AQ9UPW8 1703 aa27.89■■■□□ 2.06
RAD18-208ENST00000469793 SCRIBQ14160 1630 aa27.8■■■□□ 2.04
RAD18-208ENST00000469793 BICRAQ9NZM4 1560 aa27.63■■■□□ 2.01
RAD18-208ENST00000469793 SHROOM4Q9ULL8 1493 aa27.44■■□□□ 1.98
RAD18-208ENST00000469793 PABPN1Q86U42 306 aaKnown RBP eCLIP27.43■■□□□ 1.98
RAD18-208ENST00000469793 EIF4G1Q04637 1599 aaKnown RBP26.85■■□□□ 1.89
RAD18-208ENST00000469793 CECR2Q9BXF3 1484 aa26.73■■□□□ 1.87
RAD18-208ENST00000469793 BAZ1AQ9NRL2 1556 aaPredicted RBP26.69■■□□□ 1.86
RAD18-208ENST00000469793 SMARCA4P51532 1647 aa26.67■■□□□ 1.86
RAD18-208ENST00000469793 CC2D2AQ9P2K1 1620 aa26.64■■□□□ 1.85
RAD18-208ENST00000469793 DNAJC5BQ9UF47 199 aa26.53■■□□□ 1.84
RAD18-208ENST00000469793 MROH2BQ7Z745 1585 aa26.52■■□□□ 1.84
RAD18-208ENST00000469793 PEG3Q9GZU2 1588 aa26.45■■□□□ 1.82
RAD18-208ENST00000469793 SMARCA2P51531 1590 aa26.42■■□□□ 1.82
RAD18-208ENST00000469793 ATAD2BQ9ULI0 1458 aa26.39■■□□□ 1.82
RAD18-208ENST00000469793 RSF1Q96T23 1441 aaPredicted RBP26.35■■□□□ 1.81
RAD18-208ENST00000469793 NCAPD3P42695 1498 aa26.33■■□□□ 1.81
RAD18-208ENST00000469793 HMGXB3Q12766 1538 aa26.29■■□□□ 1.8
RAD18-208ENST00000469793 WIZO95785 1651 aa26.27■■□□□ 1.8
RAD18-208ENST00000469793 BAZ1BQ9UIG0 1483 aaKnown RBP26.19■■□□□ 1.78
RAD18-208ENST00000469793 TOP2AP11388 1531 aaKnown RBP26.05■■□□□ 1.76
RAD18-208ENST00000469793 SUPT5HO00267 1087 aaKnown RBP25.84■■□□□ 1.73
RAD18-208ENST00000469793 CCDC88BA6NC98 1476 aa25.68■■□□□ 1.7
RAD18-208ENST00000469793 LAMC3Q9Y6N6 1575 aa25.61■■□□□ 1.69
RAD18-208ENST00000469793 CADPSQ9ULU8 1353 aa25.55■■□□□ 1.68
RAD18-208ENST00000469793 NESP48681 1621 aa25.52■■□□□ 1.68
RAD18-208ENST00000469793 CFTRP13569 1480 aa25.52■■□□□ 1.68
RAD18-208ENST00000469793 PRDM2Q13029 1718 aa25.46■■□□□ 1.67
RAD18-208ENST00000469793 PDS5BQ9NTI5 1447 aa25.37■■□□□ 1.65
RAD18-208ENST00000469793 AEBP2Q6ZN18 517 aaPredicted RBP25.35■■□□□ 1.65
RAD18-208ENST00000469793 KIF21AQ7Z4S6 1674 aa25.31■■□□□ 1.64
RAD18-208ENST00000469793 ERCC6Q03468 1493 aa25.29■■□□□ 1.64
RAD18-208ENST00000469793 FANCD2Q9BXW9 1451 aa25.27■■□□□ 1.64
RAD18-208ENST00000469793 CEP164Q9UPV0 1460 aa25.22■■□□□ 1.63
RAD18-208ENST00000469793 THOC2Q8NI27 1593 aaKnown RBP25.16■■□□□ 1.62
RAD18-208ENST00000469793 MRC2Q9UBG0 1479 aa25.11■■□□□ 1.61
RAD18-208ENST00000469793 WDR62O43379 1518 aa25.05■■□□□ 1.6
RAD18-208ENST00000469793 URB2Q14146 1524 aaKnown RBP25■■□□□ 1.59
RAD18-208ENST00000469793 ABCC8Q09428 1581 aa24.97■■□□□ 1.59
RAD18-208ENST00000469793 DNMBPQ6XZF7 1577 aa24.96■■□□□ 1.59
RAD18-208ENST00000469793 CUX2O14529 1486 aa24.96■■□□□ 1.59
RAD18-208ENST00000469793 TOPBP1Q92547 1522 aa24.92■■□□□ 1.58
RAD18-208ENST00000469793 CUX1P39880 1505 aa24.88■■□□□ 1.57
RAD18-208ENST00000469793 CHIC1Q5VXU3 224 aa24.88■■□□□ 1.57
RAD18-208ENST00000469793 WRNQ14191 1432 aaPredicted RBP eCLIP24.85■■□□□ 1.57
RAD18-208ENST00000469793 BIVM-ERCC5R4GMW8 1640 aa24.82■■□□□ 1.56
RAD18-208ENST00000469793 TOP2BQ02880 1626 aa24.79■■□□□ 1.56
RAD18-208ENST00000469793 SYNJ1O43426 1573 aa24.79■■□□□ 1.56
RAD18-208ENST00000469793 POLA1P09884 1462 aaPredicted RBP24.74■■□□□ 1.55
RAD18-208ENST00000469793 FGD5Q6ZNL6 1462 aa24.72■■□□□ 1.55
RAD18-208ENST00000469793 IFT140Q96RY7 1462 aa24.68■■□□□ 1.54
RAD18-208ENST00000469793 TARBP1Q13395 1621 aaKnown RBP24.65■■□□□ 1.54
RAD18-208ENST00000469793 WDR97A6NE52 1622 aa24.59■■□□□ 1.53
RAD18-208ENST00000469793 SOGA1O94964 1423 aa24.59■■□□□ 1.53
RAD18-208ENST00000469793 RAD54L2Q9Y4B4 1467 aa24.58■■□□□ 1.52
RAD18-208ENST00000469793 ABCA10Q8WWZ4 1543 aa24.53■■□□□ 1.52
RAD18-208ENST00000469793 ZNF608Q9ULD9 1512 aaPredicted RBP24.49■■□□□ 1.51
RAD18-208ENST00000469793 EIF4G3O43432 1585 aaKnown RBP24.48■■□□□ 1.51
RAD18-208ENST00000469793 ABCA5Q8WWZ7 1642 aa24.43■■□□□ 1.5
RAD18-208ENST00000469793 TRIM41Q8WV44 630 aa24.43■■□□□ 1.5
RAD18-208ENST00000469793 TDRD9Q8NDG6 1382 aaKnown RBP24.38■■□□□ 1.49
RAD18-208ENST00000469793 AQRO60306 1485 aaKnown RBP eCLIP24.38■■□□□ 1.495e-6■■□□□ 14.3
RAD18-208ENST00000469793 GAPVD1Q14C86 1478 aa24.35■■□□□ 1.49
RAD18-208ENST00000469793 PBRM1Q86U86 1689 aa24.34■■□□□ 1.49
RAD18-208ENST00000469793 GRIN2BQ13224 1484 aa24.31■■□□□ 1.48
RAD18-208ENST00000469793 KIF27Q86VH2 1401 aa24.3■■□□□ 1.48
RAD18-208ENST00000469793 ERICH3Q5RHP9 1530 aa24.26■■□□□ 1.47
RAD18-208ENST00000469793 MAGI1Q96QZ7 1491 aaPredicted RBP24.23■■□□□ 1.47
RAD18-208ENST00000469793 SNAPC4Q5SXM2 1469 aa24.21■■□□□ 1.47
RAD18-208ENST00000469793 ADAMTS12P58397 1594 aa24.16■■□□□ 1.46
RAD18-208ENST00000469793 RUSC2Q8N2Y8 1516 aa24.15■■□□□ 1.46
RAD18-208ENST00000469793 CUL7Q14999 1698 aa24.14■■□□□ 1.45
RAD18-208ENST00000469793 EEA1Q15075 1411 aa24.12■■□□□ 1.45
RAD18-208ENST00000469793 IGF1RP08069 1367 aa24.12■■□□□ 1.45
RAD18-208ENST00000469793 SYNJ2O15056 1496 aa24.11■■□□□ 1.45
RAD18-208ENST00000469793 CHD1O14646 1710 aa24.1■■□□□ 1.45
RAD18-208ENST00000469793 FHAD1B1AJZ9 1412 aa24.09■■□□□ 1.45
RAD18-208ENST00000469793 GRIN2AQ12879 1464 aa24■■□□□ 1.43
RAD18-208ENST00000469793 CARMIL1Q5VZK9 1371 aa23.99■■□□□ 1.43
RAD18-208ENST00000469793 CHMP7Q8WUX9 453 aaPredicted RBP23.97■■□□□ 1.43
RAD18-208ENST00000469793 PRXQ9BXM0 1461 aa23.94■■□□□ 1.42
RAD18-208ENST00000469793 CSRNP3Q8WYN3 585 aa23.93■■□□□ 1.42
RAD18-208ENST00000469793 FBLN2P98095 1184 aa23.92■■□□□ 1.42
RAD18-208ENST00000469793 RAPGEF2Q9Y4G8 1499 aa23.92■■□□□ 1.42
RAD18-208ENST00000469793 NUP160Q12769 1436 aa23.89■■□□□ 1.41
RAD18-208ENST00000469793 CEP170Q5SW79 1584 aa23.87■■□□□ 1.41
RAD18-208ENST00000469793 OSCARQ8IYS5 282 aa23.87■■□□□ 1.41
RAD18-208ENST00000469793 KIF21BO75037 1637 aa23.87■■□□□ 1.41
RAD18-208ENST00000469793 CLASP1Q7Z460 1538 aa23.85■■□□□ 1.41
RAD18-208ENST00000469793 FAM9AQ8IZU1 332 aaPredicted RBP23.85■■□□□ 1.41
RAD18-208ENST00000469793 CTTNBP2Q8WZ74 1663 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms