RNA–Protein interactions for RNA: ENST00000469654.2

ATG7-221, Transcript of autophagy related 7, humanhuman

TSL 3

Gene ATG7, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG7-221ENST00000469654 NISCHQ9Y2I1 1504 aa41.27■■■■■ 4.2
ATG7-221ENST00000469654 CCDC180Q9P1Z9 1646 aa36.59■■■■□ 3.45
ATG7-221ENST00000469654 ABCC9O60706 1549 aa35.78■■■■□ 3.32
ATG7-221ENST00000469654 DCAF8L2P0C7V8 631 aa34.47■■■■□ 3.11
ATG7-221ENST00000469654 RB1CC1Q8TDY2 1594 aa34.42■■■■□ 3.1
ATG7-221ENST00000469654 NACADO15069 1562 aa34.4■■■■□ 3.1
ATG7-221ENST00000469654 ZCCHC6Q5VYS8 1495 aaKnown RBP34.39■■■■□ 3.1
ATG7-221ENST00000469654 MYO15BQ96JP2 1530 aa34.24■■■■□ 3.07
ATG7-221ENST00000469654 DCAF1Q9Y4B6 1507 aa34.13■■■■□ 3.05
ATG7-221ENST00000469654 DNAJC5BQ9UF47 199 aa33.85■■■■□ 3.01
ATG7-221ENST00000469654 UNC13AQ9UPW8 1703 aa33.63■■■□□ 2.97
ATG7-221ENST00000469654 PABPN1Q86U42 306 aaKnown RBP eCLIP33.48■■■□□ 2.95
ATG7-221ENST00000469654 SCRIBQ14160 1630 aa33.43■■■□□ 2.94
ATG7-221ENST00000469654 BICRAQ9NZM4 1560 aa33.4■■■□□ 2.94
ATG7-221ENST00000469654 SHROOM4Q9ULL8 1493 aa33.02■■■□□ 2.88
ATG7-221ENST00000469654 EIF4G1Q04637 1599 aaKnown RBP32.5■■■□□ 2.79
ATG7-221ENST00000469654 CC2D2AQ9P2K1 1620 aa32.34■■■□□ 2.77
ATG7-221ENST00000469654 CECR2Q9BXF3 1484 aa32.17■■■□□ 2.74
ATG7-221ENST00000469654 SMARCA4P51532 1647 aa31.98■■■□□ 2.71
ATG7-221ENST00000469654 BAZ1AQ9NRL2 1556 aaPredicted RBP31.96■■■□□ 2.71
ATG7-221ENST00000469654 MROH2BQ7Z745 1585 aa31.82■■■□□ 2.68
ATG7-221ENST00000469654 ATAD2BQ9ULI0 1458 aa31.81■■■□□ 2.68
ATG7-221ENST00000469654 DNAJC5Q9H3Z4 198 aa31.78■■■□□ 2.68
ATG7-221ENST00000469654 NCAPD3P42695 1498 aa31.78■■■□□ 2.68
ATG7-221ENST00000469654 SMARCA2P51531 1590 aa31.75■■■□□ 2.67
ATG7-221ENST00000469654 PEG3Q9GZU2 1588 aa31.68■■■□□ 2.66
ATG7-221ENST00000469654 HMGXB3Q12766 1538 aa31.6■■■□□ 2.65
ATG7-221ENST00000469654 BAZ1BQ9UIG0 1483 aaKnown RBP31.54■■■□□ 2.64
ATG7-221ENST00000469654 RSF1Q96T23 1441 aaPredicted RBP31.49■■■□□ 2.63
ATG7-221ENST00000469654 WIZO95785 1651 aa31.46■■■□□ 2.63
ATG7-221ENST00000469654 TOP2AP11388 1531 aaKnown RBP31.13■■■□□ 2.57
ATG7-221ENST00000469654 NESP48681 1621 aa30.99■■■□□ 2.55
ATG7-221ENST00000469654 LAMC3Q9Y6N6 1575 aa30.9■■■□□ 2.54
ATG7-221ENST00000469654 CADPSQ9ULU8 1353 aa30.86■■■□□ 2.53
ATG7-221ENST00000469654 ERCC6Q03468 1493 aa30.81■■■□□ 2.52
ATG7-221ENST00000469654 CCDC88BA6NC98 1476 aa30.79■■■□□ 2.52
ATG7-221ENST00000469654 SUPT5HO00267 1087 aaKnown RBP30.79■■■□□ 2.52
ATG7-221ENST00000469654 PDS5BQ9NTI5 1447 aa30.7■■■□□ 2.5
ATG7-221ENST00000469654 CFTRP13569 1480 aa30.7■■■□□ 2.5
ATG7-221ENST00000469654 KIF21AQ7Z4S6 1674 aa30.59■■■□□ 2.49
ATG7-221ENST00000469654 CUX2O14529 1486 aa30.59■■■□□ 2.49
ATG7-221ENST00000469654 FANCD2Q9BXW9 1451 aa30.5■■■□□ 2.47
ATG7-221ENST00000469654 THOC2Q8NI27 1593 aaKnown RBP30.47■■■□□ 2.47
ATG7-221ENST00000469654 CEP164Q9UPV0 1460 aa30.44■■■□□ 2.46
ATG7-221ENST00000469654 PRDM2Q13029 1718 aa30.4■■■□□ 2.46
ATG7-221ENST00000469654 MRC2Q9UBG0 1479 aa30.38■■■□□ 2.45
ATG7-221ENST00000469654 WDR62O43379 1518 aa30.27■■■□□ 2.44
ATG7-221ENST00000469654 URB2Q14146 1524 aaKnown RBP30.2■■■□□ 2.42
ATG7-221ENST00000469654 TOPBP1Q92547 1522 aa30.02■■■□□ 2.4
ATG7-221ENST00000469654 TRIM41Q8WV44 630 aa30.01■■■□□ 2.39
ATG7-221ENST00000469654 ABCC8Q09428 1581 aa30■■■□□ 2.39
ATG7-221ENST00000469654 DNMBPQ6XZF7 1577 aa29.98■■■□□ 2.39
ATG7-221ENST00000469654 CUX1P39880 1505 aa29.83■■■□□ 2.37
ATG7-221ENST00000469654 IFT140Q96RY7 1462 aa29.8■■■□□ 2.36
ATG7-221ENST00000469654 POLA1P09884 1462 aaPredicted RBP29.78■■■□□ 2.36
ATG7-221ENST00000469654 FGD5Q6ZNL6 1462 aa29.72■■■□□ 2.35
ATG7-221ENST00000469654 TARBP1Q13395 1621 aaKnown RBP29.68■■■□□ 2.34
ATG7-221ENST00000469654 ZNF608Q9ULD9 1512 aaPredicted RBP29.68■■■□□ 2.34
ATG7-221ENST00000469654 WRNQ14191 1432 aaPredicted RBP eCLIP29.68■■■□□ 2.34
ATG7-221ENST00000469654 SOGA1O94964 1423 aa29.67■■■□□ 2.34
ATG7-221ENST00000469654 RAD54L2Q9Y4B4 1467 aa29.67■■■□□ 2.34
ATG7-221ENST00000469654 SYNJ1O43426 1573 aa29.6■■■□□ 2.33
ATG7-221ENST00000469654 TOP2BQ02880 1626 aa29.59■■■□□ 2.33
ATG7-221ENST00000469654 BIVM-ERCC5R4GMW8 1640 aa29.57■■■□□ 2.32
ATG7-221ENST00000469654 AQRO60306 1485 aaKnown RBP eCLIP29.54■■■□□ 2.32
ATG7-221ENST00000469654 EIF4G3O43432 1585 aaKnown RBP29.53■■■□□ 2.32
ATG7-221ENST00000469654 TDRD9Q8NDG6 1382 aaKnown RBP29.5■■■□□ 2.31
ATG7-221ENST00000469654 ABCA10Q8WWZ4 1543 aa29.44■■■□□ 2.3
ATG7-221ENST00000469654 WDR97A6NE52 1622 aa29.43■■■□□ 2.3
ATG7-221ENST00000469654 GAPVD1Q14C86 1478 aa29.31■■■□□ 2.28
ATG7-221ENST00000469654 GRIN2BQ13224 1484 aa29.29■■■□□ 2.28
ATG7-221ENST00000469654 ABCA5Q8WWZ7 1642 aa29.29■■■□□ 2.28
ATG7-221ENST00000469654 SNAPC4Q5SXM2 1469 aa29.24■■■□□ 2.27
ATG7-221ENST00000469654 OSCARQ8IYS5 282 aa29.23■■■□□ 2.27
ATG7-221ENST00000469654 PBRM1Q86U86 1689 aa29.21■■■□□ 2.27
ATG7-221ENST00000469654 MAGI1Q96QZ7 1491 aaPredicted RBP29.19■■■□□ 2.26
ATG7-221ENST00000469654 FBLN2P98095 1184 aa29.16■■■□□ 2.26
ATG7-221ENST00000469654 CHD1O14646 1710 aa29.13■■■□□ 2.25
ATG7-221ENST00000469654 CHMP7Q8WUX9 453 aaPredicted RBP29.09■■■□□ 2.25
ATG7-221ENST00000469654 SYNJ2O15056 1496 aa29.09■■■□□ 2.25
ATG7-221ENST00000469654 ERICH3Q5RHP9 1530 aa29.07■■■□□ 2.24
ATG7-221ENST00000469654 KIF27Q86VH2 1401 aa29.04■■■□□ 2.24
ATG7-221ENST00000469654 ADAMTS12P58397 1594 aa29■■■□□ 2.23
ATG7-221ENST00000469654 FHAD1B1AJZ9 1412 aa28.98■■■□□ 2.23
ATG7-221ENST00000469654 IGF1RP08069 1367 aa28.95■■■□□ 2.22
ATG7-221ENST00000469654 GRIN2AQ12879 1464 aa28.91■■■□□ 2.22
ATG7-221ENST00000469654 RUSC2Q8N2Y8 1516 aa28.85■■■□□ 2.21
ATG7-221ENST00000469654 CLASP1Q7Z460 1538 aa28.84■■■□□ 2.21
ATG7-221ENST00000469654 CUL7Q14999 1698 aa28.8■■■□□ 2.2
ATG7-221ENST00000469654 CHIC1Q5VXU3 224 aa28.8■■■□□ 2.2
ATG7-221ENST00000469654 NUP160Q12769 1436 aa28.79■■■□□ 2.2
ATG7-221ENST00000469654 CEP170Q5SW79 1584 aa28.77■■■□□ 2.2
ATG7-221ENST00000469654 CARMIL1Q5VZK9 1371 aa28.76■■■□□ 2.2
ATG7-221ENST00000469654 RIMBP3CA6NJZ7 1639 aa28.75■■■□□ 2.19
ATG7-221ENST00000469654 RIMBP3BA6NNM3 1639 aa28.75■■■□□ 2.19
ATG7-221ENST00000469654 RIMBP3Q9UFD9 1639 aa28.75■■■□□ 2.19
ATG7-221ENST00000469654 ARHGEF11O15085 1522 aa28.74■■■□□ 2.19
ATG7-221ENST00000469654 TRHP20396 242 aaPredicted RBP28.6■■■□□ 2.17
ATG7-221ENST00000469654 CYB5RLQ6IPT4 315 aa28.6■■■□□ 2.17
ATG7-221ENST00000469654 RAPGEF2Q9Y4G8 1499 aa28.59■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 360 ms