RNA–Protein interactions for RNA: ENST00000468980.3

PAX8-208, Transcript of paired box 8, humanhuman

TSL 3

Gene PAX8, Length 525 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX8-208ENST00000468980 NISCHQ9Y2I1 1504 aa31.07■■■□□ 2.56
PAX8-208ENST00000468980 ABCC9O60706 1549 aa29.88■■■□□ 2.37
PAX8-208ENST00000468980 DNAJC5BQ9UF47 199 aa29.42■■■□□ 2.3
PAX8-208ENST00000468980 CCDC180Q9P1Z9 1646 aa28.47■■■□□ 2.15
PAX8-208ENST00000468980 DNAJC5Q9H3Z4 198 aa28.02■■■□□ 2.08
PAX8-208ENST00000468980 RB1CC1Q8TDY2 1594 aa27.78■■■□□ 2.04
PAX8-208ENST00000468980 PABPN1Q86U42 306 aaKnown RBP eCLIP27.59■■■□□ 2.01
PAX8-208ENST00000468980 NACADO15069 1562 aa27.26■■□□□ 1.96
PAX8-208ENST00000468980 UNC13AQ9UPW8 1703 aa27.17■■□□□ 1.94
PAX8-208ENST00000468980 BICRAQ9NZM4 1560 aa27.14■■□□□ 1.93
PAX8-208ENST00000468980 CECR2Q9BXF3 1484 aa27.08■■□□□ 1.93
PAX8-208ENST00000468980 CC2D2AQ9P2K1 1620 aa26.94■■□□□ 1.9
PAX8-208ENST00000468980 DCAF8L2P0C7V8 631 aa26.7■■□□□ 1.86
PAX8-208ENST00000468980 SHROOM4Q9ULL8 1493 aa26.56■■□□□ 1.84
PAX8-208ENST00000468980 EIF4G1Q04637 1599 aaKnown RBP26.54■■□□□ 1.84
PAX8-208ENST00000468980 MYO15BQ96JP2 1530 aa26.47■■□□□ 1.83
PAX8-208ENST00000468980 CUX2O14529 1486 aa26.36■■□□□ 1.81
PAX8-208ENST00000468980 TRIM41Q8WV44 630 aa26.09■■□□□ 1.77
PAX8-208ENST00000468980 ERCC6Q03468 1493 aa25.85■■□□□ 1.73
PAX8-208ENST00000468980 SCRIBQ14160 1630 aa25.84■■□□□ 1.73
PAX8-208ENST00000468980 DCAF1Q9Y4B6 1507 aa25.59■■□□□ 1.69
PAX8-208ENST00000468980 ZCCHC6Q5VYS8 1495 aaKnown RBP25.46■■□□□ 1.67
PAX8-208ENST00000468980 THOC2Q8NI27 1593 aaKnown RBP25.34■■□□□ 1.65
PAX8-208ENST00000468980 NESP48681 1621 aa25.3■■□□□ 1.64
PAX8-208ENST00000468980 NCAPD3P42695 1498 aa25.24■■□□□ 1.63
PAX8-208ENST00000468980 SMARCA2P51531 1590 aa25■■□□□ 1.59
PAX8-208ENST00000468980 ATAD2BQ9ULI0 1458 aa24.95■■□□□ 1.58
PAX8-208ENST00000468980 BAZ1AQ9NRL2 1556 aaPredicted RBP24.91■■□□□ 1.58
PAX8-208ENST00000468980 HMGXB3Q12766 1538 aa24.89■■□□□ 1.57
PAX8-208ENST00000468980 OSCARQ8IYS5 282 aa24.87■■□□□ 1.57
PAX8-208ENST00000468980 KIF21AQ7Z4S6 1674 aa24.87■■□□□ 1.57
PAX8-208ENST00000468980 AEBP2Q6ZN18 517 aaPredicted RBP24.85■■□□□ 1.57
PAX8-208ENST00000468980 LAMC3Q9Y6N6 1575 aa24.84■■□□□ 1.57
PAX8-208ENST00000468980 RIMBP3CA6NJZ7 1639 aa24.75■■□□□ 1.55
PAX8-208ENST00000468980 RIMBP3BA6NNM3 1639 aa24.75■■□□□ 1.55
PAX8-208ENST00000468980 RIMBP3Q9UFD9 1639 aa24.75■■□□□ 1.55
PAX8-208ENST00000468980 PDS5BQ9NTI5 1447 aa24.74■■□□□ 1.55
PAX8-208ENST00000468980 WDR62O43379 1518 aa24.66■■□□□ 1.54
PAX8-208ENST00000468980 MRC2Q9UBG0 1479 aa24.64■■□□□ 1.53
PAX8-208ENST00000468980 BAZ1BQ9UIG0 1483 aaKnown RBP24.57■■□□□ 1.52
PAX8-208ENST00000468980 ARHGEF11O15085 1522 aa24.53■■□□□ 1.52
PAX8-208ENST00000468980 SMARCA4P51532 1647 aa24.53■■□□□ 1.52
PAX8-208ENST00000468980 TRHP20396 242 aaPredicted RBP24.52■■□□□ 1.52
PAX8-208ENST00000468980 CYB5RLQ6IPT4 315 aa24.39■■□□□ 1.49
PAX8-208ENST00000468980 CADPSQ9ULU8 1353 aa24.37■■□□□ 1.49
PAX8-208ENST00000468980 PEG3Q9GZU2 1588 aa24.34■■□□□ 1.49
PAX8-208ENST00000468980 ARAP1Q96P48 1450 aa24.22■■□□□ 1.47
PAX8-208ENST00000468980 CEP164Q9UPV0 1460 aa24.22■■□□□ 1.47
PAX8-208ENST00000468980 ILDR1Q86SU0 546 aaPredicted RBP24.18■■□□□ 1.46
PAX8-208ENST00000468980 FANCD2Q9BXW9 1451 aa24.08■■□□□ 1.45
PAX8-208ENST00000468980 URB2Q14146 1524 aaKnown RBP24.02■■□□□ 1.44
PAX8-208ENST00000468980 ZNF608Q9ULD9 1512 aaPredicted RBP23.96■■□□□ 1.43
PAX8-208ENST00000468980 MROH2BQ7Z745 1585 aa23.93■■□□□ 1.42
PAX8-208ENST00000468980 RSF1Q96T23 1441 aaPredicted RBP23.92■■□□□ 1.42
PAX8-208ENST00000468980 CFTRP13569 1480 aa23.81■■□□□ 1.4
PAX8-208ENST00000468980 IFT140Q96RY7 1462 aa23.81■■□□□ 1.4
PAX8-208ENST00000468980 CHD1O14646 1710 aa23.78■■□□□ 1.4
PAX8-208ENST00000468980 EIF4G3O43432 1585 aaKnown RBP23.72■■□□□ 1.39
PAX8-208ENST00000468980 FBLN2P98095 1184 aa23.56■■□□□ 1.36
PAX8-208ENST00000468980 CLASP1Q7Z460 1538 aa23.55■■□□□ 1.36
PAX8-208ENST00000468980 AQRO60306 1485 aaKnown RBP eCLIP23.54■■□□□ 1.36
PAX8-208ENST00000468980 WIZO95785 1651 aa23.54■■□□□ 1.36
PAX8-208ENST00000468980 TOPBP1Q92547 1522 aa23.48■■□□□ 1.35
PAX8-208ENST00000468980 KDM4FA0A1W2PPD8 638 aa23.45■■□□□ 1.34
PAX8-208ENST00000468980 TARBP1Q13395 1621 aaKnown RBP23.41■■□□□ 1.34
PAX8-208ENST00000468980 GAPVD1Q14C86 1478 aa23.37■■□□□ 1.33
PAX8-208ENST00000468980 PRDM2Q13029 1718 aa23.36■■□□□ 1.33
PAX8-208ENST00000468980 SYNJ1O43426 1573 aa23.32■■□□□ 1.32
PAX8-208ENST00000468980 ABCC8Q09428 1581 aa23.27■■□□□ 1.32
PAX8-208ENST00000468980 DNMBPQ6XZF7 1577 aa23.25■■□□□ 1.31
PAX8-208ENST00000468980 SNAPC4Q5SXM2 1469 aa23.24■■□□□ 1.31
PAX8-208ENST00000468980 KIF13AQ9H1H9 1805 aa23.23■■□□□ 1.31
PAX8-208ENST00000468980 CHMP7Q8WUX9 453 aaPredicted RBP23.18■■□□□ 1.3
PAX8-208ENST00000468980 POLA1P09884 1462 aaPredicted RBP23.16■■□□□ 1.3
PAX8-208ENST00000468980 TDRD9Q8NDG6 1382 aaKnown RBP23.14■■□□□ 1.3
PAX8-208ENST00000468980 TOP2AP11388 1531 aaKnown RBP23.14■■□□□ 1.3
PAX8-208ENST00000468980 MAGI1Q96QZ7 1491 aaPredicted RBP23.11■■□□□ 1.29
PAX8-208ENST00000468980 ERCC6L2Q5T890 1561 aa23.1■■□□□ 1.29
PAX8-208ENST00000468980 RAD54L2Q9Y4B4 1467 aa23.1■■□□□ 1.29
PAX8-208ENST00000468980 SYNJ2O15056 1496 aa23.06■■□□□ 1.28
PAX8-208ENST00000468980 FBXO41Q8TF61 875 aa23.04■■□□□ 1.28
PAX8-208ENST00000468980 HECW2Q9P2P5 1572 aa23.03■■□□□ 1.28
PAX8-208ENST00000468980 WDR97A6NE52 1622 aa23.02■■□□□ 1.28
PAX8-208ENST00000468980 SOGA1O94964 1423 aa22.99■■□□□ 1.27
PAX8-208ENST00000468980 GRIN2BQ13224 1484 aa22.96■■□□□ 1.27
PAX8-208ENST00000468980 KDM6BO15054 1643 aa22.96■■□□□ 1.27
PAX8-208ENST00000468980 ABCC10Q5T3U5 1492 aa22.93■■□□□ 1.26
PAX8-208ENST00000468980 CCDC88BA6NC98 1476 aa22.92■■□□□ 1.26
PAX8-208ENST00000468980 FAM69CQ0P6D2 419 aa22.91■■□□□ 1.26
PAX8-208ENST00000468980 ADGRL1O94910 1474 aa22.87■■□□□ 1.25
PAX8-208ENST00000468980 LMTK3Q96Q04 1460 aa22.87■■□□□ 1.25
PAX8-208ENST00000468980 CEP170Q5SW79 1584 aa22.86■■□□□ 1.25
PAX8-208ENST00000468980 DIP2BQ9P265 1576 aa22.83■■□□□ 1.25
PAX8-208ENST00000468980 FGD5Q6ZNL6 1462 aa22.79■■□□□ 1.24
PAX8-208ENST00000468980 MAPKBP1O60336 1514 aa22.76■■□□□ 1.23
PAX8-208ENST00000468980 SHROOM2Q13796 1616 aa22.75■■□□□ 1.23
PAX8-208ENST00000468980 PBRM1Q86U86 1689 aa22.74■■□□□ 1.23
PAX8-208ENST00000468980 SOCS7O14512 581 aa22.73■■□□□ 1.23
PAX8-208ENST00000468980 NUP160Q12769 1436 aa22.7■■□□□ 1.22
PAX8-208ENST00000468980 GRIN2AQ12879 1464 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms