RNA–Protein interactions for RNA: ENST00000468796.1

AGAP3-208, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, humanhuman

TSL 4

Gene AGAP3, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP3-208ENST00000468796 NISCHQ9Y2I1 1504 aa21.38■■□□□ 1.01
AGAP3-208ENST00000468796 CCDC180Q9P1Z9 1646 aa18.95■□□□□ 0.62
AGAP3-208ENST00000468796 ABCC9O60706 1549 aa18.81■□□□□ 0.6
AGAP3-208ENST00000468796 DCAF8L2P0C7V8 631 aa18.09■□□□□ 0.49
AGAP3-208ENST00000468796 RB1CC1Q8TDY2 1594 aa17.95■□□□□ 0.46
AGAP3-208ENST00000468796 NACADO15069 1562 aa17.91■□□□□ 0.46
AGAP3-208ENST00000468796 ZCCHC6Q5VYS8 1495 aaKnown RBP17.75■□□□□ 0.43
AGAP3-208ENST00000468796 MYO15BQ96JP2 1530 aa17.72■□□□□ 0.43
AGAP3-208ENST00000468796 PABPN1Q86U42 306 aaKnown RBP eCLIP17.65■□□□□ 0.42
AGAP3-208ENST00000468796 DCAF1Q9Y4B6 1507 aa17.62■□□□□ 0.41
AGAP3-208ENST00000468796 UNC13AQ9UPW8 1703 aa17.54■□□□□ 0.4
AGAP3-208ENST00000468796 DNAJC5BQ9UF47 199 aa17.47■□□□□ 0.39
AGAP3-208ENST00000468796 BICRAQ9NZM4 1560 aa17.45■□□□□ 0.38
AGAP3-208ENST00000468796 SCRIBQ14160 1630 aa17.39■□□□□ 0.37
AGAP3-208ENST00000468796 SHROOM4Q9ULL8 1493 aa17.14■□□□□ 0.33
AGAP3-208ENST00000468796 EIF4G1Q04637 1599 aaKnown RBP16.98■□□□□ 0.31
AGAP3-208ENST00000468796 CC2D2AQ9P2K1 1620 aa16.96■□□□□ 0.3
AGAP3-208ENST00000468796 CECR2Q9BXF3 1484 aa16.89■□□□□ 0.29
AGAP3-208ENST00000468796 SMARCA4P51532 1647 aa16.59■□□□□ 0.25
AGAP3-208ENST00000468796 ATAD2BQ9ULI0 1458 aa16.57■□□□□ 0.24
AGAP3-208ENST00000468796 NCAPD3P42695 1498 aa16.56■□□□□ 0.24
AGAP3-208ENST00000468796 BAZ1AQ9NRL2 1556 aaPredicted RBP16.54■□□□□ 0.24
AGAP3-208ENST00000468796 MROH2BQ7Z745 1585 aa16.51■□□□□ 0.23
AGAP3-208ENST00000468796 SMARCA2P51531 1590 aa16.49■□□□□ 0.23
AGAP3-208ENST00000468796 BAZ1BQ9UIG0 1483 aaKnown RBP16.41■□□□□ 0.22
AGAP3-208ENST00000468796 HMGXB3Q12766 1538 aa16.4■□□□□ 0.22
AGAP3-208ENST00000468796 PEG3Q9GZU2 1588 aa16.38■□□□□ 0.21
AGAP3-208ENST00000468796 WIZO95785 1651 aa16.3■□□□□ 0.2
AGAP3-208ENST00000468796 RSF1Q96T23 1441 aaPredicted RBP16.29■□□□□ 0.2
AGAP3-208ENST00000468796 NESP48681 1621 aa16.25■□□□□ 0.19
AGAP3-208ENST00000468796 ERCC6Q03468 1493 aa16.19■□□□□ 0.18
AGAP3-208ENST00000468796 CADPSQ9ULU8 1353 aa16.12■□□□□ 0.17
AGAP3-208ENST00000468796 LAMC3Q9Y6N6 1575 aa16.09■□□□□ 0.17
AGAP3-208ENST00000468796 TOP2AP11388 1531 aaKnown RBP16.09■□□□□ 0.17
AGAP3-208ENST00000468796 PDS5BQ9NTI5 1447 aa16.05■□□□□ 0.16
AGAP3-208ENST00000468796 CUX2O14529 1486 aa16.01■□□□□ 0.15
AGAP3-208ENST00000468796 CCDC88BA6NC98 1476 aa15.97■□□□□ 0.15
AGAP3-208ENST00000468796 KIF21AQ7Z4S6 1674 aa15.97■□□□□ 0.15
AGAP3-208ENST00000468796 CFTRP13569 1480 aa15.96■□□□□ 0.14
AGAP3-208ENST00000468796 THOC2Q8NI27 1593 aaKnown RBP15.92■□□□□ 0.14
AGAP3-208ENST00000468796 SUPT5HO00267 1087 aaKnown RBP15.91■□□□□ 0.14
AGAP3-208ENST00000468796 FANCD2Q9BXW9 1451 aa15.91■□□□□ 0.14
AGAP3-208ENST00000468796 MRC2Q9UBG0 1479 aa15.87■□□□□ 0.13
AGAP3-208ENST00000468796 CEP164Q9UPV0 1460 aa15.87■□□□□ 0.13
AGAP3-208ENST00000468796 WDR62O43379 1518 aa15.79■□□□□ 0.12
AGAP3-208ENST00000468796 DNAJC5Q9H3Z4 198 aa15.77■□□□□ 0.12
AGAP3-208ENST00000468796 URB2Q14146 1524 aaKnown RBP15.75■□□□□ 0.11
AGAP3-208ENST00000468796 PRDM2Q13029 1718 aa15.72■□□□□ 0.11
AGAP3-208ENST00000468796 TOPBP1Q92547 1522 aa15.63■□□□□ 0.09
AGAP3-208ENST00000468796 ABCC8Q09428 1581 aa15.58■□□□□ 0.09
AGAP3-208ENST00000468796 DNMBPQ6XZF7 1577 aa15.57■□□□□ 0.08
AGAP3-208ENST00000468796 IFT140Q96RY7 1462 aa15.54■□□□□ 0.08
AGAP3-208ENST00000468796 ZNF608Q9ULD9 1512 aaPredicted RBP15.53■□□□□ 0.08
AGAP3-208ENST00000468796 POLA1P09884 1462 aaPredicted RBP15.49■□□□□ 0.07
AGAP3-208ENST00000468796 CUX1P39880 1505 aa15.48■□□□□ 0.07
AGAP3-208ENST00000468796 RAD54L2Q9Y4B4 1467 aa15.48■□□□□ 0.07
AGAP3-208ENST00000468796 SOGA1O94964 1423 aa15.47■□□□□ 0.07
AGAP3-208ENST00000468796 AQRO60306 1485 aaKnown RBP eCLIP15.46■□□□□ 0.064e-7■■■■■ 28.2
AGAP3-208ENST00000468796 OSCARQ8IYS5 282 aa15.45■□□□□ 0.06
AGAP3-208ENST00000468796 FGD5Q6ZNL6 1462 aa15.45■□□□□ 0.06
AGAP3-208ENST00000468796 TARBP1Q13395 1621 aaKnown RBP15.43■□□□□ 0.06
AGAP3-208ENST00000468796 TDRD9Q8NDG6 1382 aaKnown RBP15.43■□□□□ 0.06
AGAP3-208ENST00000468796 EIF4G3O43432 1585 aaKnown RBP15.38■□□□□ 0.05
AGAP3-208ENST00000468796 FBLN2P98095 1184 aa15.35■□□□□ 0.05
AGAP3-208ENST00000468796 WRNQ14191 1432 aaPredicted RBP eCLIP15.34■□□□□ 0.05
AGAP3-208ENST00000468796 SYNJ1O43426 1573 aa15.29■□□□□ 0.04
AGAP3-208ENST00000468796 TOP2BQ02880 1626 aa15.27■□□□□ 0.03
AGAP3-208ENST00000468796 ABCA10Q8WWZ4 1543 aa15.27■□□□□ 0.03
AGAP3-208ENST00000468796 SNAPC4Q5SXM2 1469 aa15.27■□□□□ 0.03
AGAP3-208ENST00000468796 CHMP7Q8WUX9 453 aaPredicted RBP15.26■□□□□ 0.03
AGAP3-208ENST00000468796 GRIN2BQ13224 1484 aa15.26■□□□□ 0.03
AGAP3-208ENST00000468796 GAPVD1Q14C86 1478 aa15.26■□□□□ 0.03
AGAP3-208ENST00000468796 TRIM41Q8WV44 630 aa15.25■□□□□ 0.03
AGAP3-208ENST00000468796 BIVM-ERCC5R4GMW8 1640 aa15.25■□□□□ 0.03
AGAP3-208ENST00000468796 WDR97A6NE52 1622 aa15.23■□□□□ 0.03
AGAP3-208ENST00000468796 CHD1O14646 1710 aa15.23■□□□□ 0.03
AGAP3-208ENST00000468796 MAGI1Q96QZ7 1491 aaPredicted RBP15.2■□□□□ 0.02
AGAP3-208ENST00000468796 ABCA5Q8WWZ7 1642 aa15.17■□□□□ 0.02
AGAP3-208ENST00000468796 PBRM1Q86U86 1689 aa15.16■□□□□ 0.02
AGAP3-208ENST00000468796 SYNJ2O15056 1496 aa15.15■□□□□ 0.02
AGAP3-208ENST00000468796 RIMBP3CA6NJZ7 1639 aa15.12■□□□□ 0.01
AGAP3-208ENST00000468796 RIMBP3BA6NNM3 1639 aa15.12■□□□□ 0.01
AGAP3-208ENST00000468796 RIMBP3Q9UFD9 1639 aa15.12■□□□□ 0.01
AGAP3-208ENST00000468796 ARHGEF11O15085 1522 aa15.11■□□□□ 0.01
AGAP3-208ENST00000468796 CYB5RLQ6IPT4 315 aa15.1■□□□□ 0.01
AGAP3-208ENST00000468796 FHAD1B1AJZ9 1412 aa15.07■□□□□ 0
AGAP3-208ENST00000468796 ERICH3Q5RHP9 1530 aa15.06■□□□□ 0
AGAP3-208ENST00000468796 GRIN2AQ12879 1464 aa15.05■□□□□ -0
AGAP3-208ENST00000468796 CLASP1Q7Z460 1538 aa15.05■□□□□ -0
AGAP3-208ENST00000468796 ADAMTS12P58397 1594 aa15.05■□□□□ -0
AGAP3-208ENST00000468796 IGF1RP08069 1367 aa15.04■□□□□ -0
AGAP3-208ENST00000468796 KIF27Q86VH2 1401 aa15.03■□□□□ -0
AGAP3-208ENST00000468796 ARAP1Q96P48 1450 aa15□□□□□ -0.01
AGAP3-208ENST00000468796 NUP160Q12769 1436 aa15□□□□□ -0.01
AGAP3-208ENST00000468796 CEP170Q5SW79 1584 aa14.98□□□□□ -0.01
AGAP3-208ENST00000468796 JPH4Q96JJ6 628 aa14.94□□□□□ -0.02
AGAP3-208ENST00000468796 CARMIL1Q5VZK9 1371 aa14.94□□□□□ -0.02
AGAP3-208ENST00000468796 RUSC2Q8N2Y8 1516 aa14.93□□□□□ -0.02
AGAP3-208ENST00000468796 ERCC6L2Q5T890 1561 aa14.9□□□□□ -0.02
AGAP3-208ENST00000468796 PRG4Q92954 1404 aaPredicted RBP14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms