RNA–Protein interactions for RNA: ENST00000468774.3

ATP1A3-204, Transcript of ATPase Na+/K+ transporting subunit alpha 3, humanhuman

TSL 3

Gene ATP1A3, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A3-204ENST00000468774 NISCHQ9Y2I1 1504 aa33.44■■■□□ 2.94
ATP1A3-204ENST00000468774 CCDC180Q9P1Z9 1646 aa29.6■■■□□ 2.33
ATP1A3-204ENST00000468774 ABCC9O60706 1549 aa28.89■■■□□ 2.22
ATP1A3-204ENST00000468774 DCAF8L2P0C7V8 631 aa27.91■■■□□ 2.06
ATP1A3-204ENST00000468774 ZCCHC6Q5VYS8 1495 aaKnown RBP27.88■■■□□ 2.05
ATP1A3-204ENST00000468774 NACADO15069 1562 aa27.8■■■□□ 2.04
ATP1A3-204ENST00000468774 RB1CC1Q8TDY2 1594 aa27.78■■■□□ 2.04
ATP1A3-204ENST00000468774 MYO15BQ96JP2 1530 aa27.67■■■□□ 2.02
ATP1A3-204ENST00000468774 DCAF1Q9Y4B6 1507 aa27.63■■■□□ 2.01
ATP1A3-204ENST00000468774 UNC13AQ9UPW8 1703 aa27.24■■□□□ 1.95
ATP1A3-204ENST00000468774 SCRIBQ14160 1630 aa27.08■■□□□ 1.93
ATP1A3-204ENST00000468774 PABPN1Q86U42 306 aaKnown RBP eCLIP27.07■■□□□ 1.92
ATP1A3-204ENST00000468774 BICRAQ9NZM4 1560 aa27.03■■□□□ 1.92
ATP1A3-204ENST00000468774 SHROOM4Q9ULL8 1493 aa26.61■■□□□ 1.85
ATP1A3-204ENST00000468774 DNAJC5BQ9UF47 199 aa26.48■■□□□ 1.83
ATP1A3-204ENST00000468774 EIF4G1Q04637 1599 aaKnown RBP26.25■■□□□ 1.79
ATP1A3-204ENST00000468774 CC2D2AQ9P2K1 1620 aa26.13■■□□□ 1.77
ATP1A3-204ENST00000468774 CECR2Q9BXF3 1484 aa26.11■■□□□ 1.77
ATP1A3-204ENST00000468774 SMARCA4P51532 1647 aa25.9■■□□□ 1.74
ATP1A3-204ENST00000468774 BAZ1AQ9NRL2 1556 aaPredicted RBP25.86■■□□□ 1.73
ATP1A3-204ENST00000468774 MROH2BQ7Z745 1585 aa25.82■■□□□ 1.72
ATP1A3-204ENST00000468774 ATAD2BQ9ULI0 1458 aa25.74■■□□□ 1.71
ATP1A3-204ENST00000468774 NCAPD3P42695 1498 aa25.69■■□□□ 1.7
ATP1A3-204ENST00000468774 SMARCA2P51531 1590 aa25.65■■□□□ 1.7
ATP1A3-204ENST00000468774 PEG3Q9GZU2 1588 aa25.64■■□□□ 1.69
ATP1A3-204ENST00000468774 RSF1Q96T23 1441 aaPredicted RBP25.56■■□□□ 1.68
ATP1A3-204ENST00000468774 WIZO95785 1651 aa25.55■■□□□ 1.68
ATP1A3-204ENST00000468774 HMGXB3Q12766 1538 aa25.53■■□□□ 1.68
ATP1A3-204ENST00000468774 BAZ1BQ9UIG0 1483 aaKnown RBP25.49■■□□□ 1.67
ATP1A3-204ENST00000468774 TOP2AP11388 1531 aaKnown RBP25.22■■□□□ 1.63
ATP1A3-204ENST00000468774 NESP48681 1621 aa25.08■■□□□ 1.6
ATP1A3-204ENST00000468774 SUPT5HO00267 1087 aaKnown RBP25.05■■□□□ 1.6
ATP1A3-204ENST00000468774 CCDC88BA6NC98 1476 aa24.98■■□□□ 1.59
ATP1A3-204ENST00000468774 CADPSQ9ULU8 1353 aa24.94■■□□□ 1.58
ATP1A3-204ENST00000468774 LAMC3Q9Y6N6 1575 aa24.94■■□□□ 1.58
ATP1A3-204ENST00000468774 CFTRP13569 1480 aa24.83■■□□□ 1.57
ATP1A3-204ENST00000468774 ERCC6Q03468 1493 aa24.81■■□□□ 1.56
ATP1A3-204ENST00000468774 PDS5BQ9NTI5 1447 aa24.77■■□□□ 1.56
ATP1A3-204ENST00000468774 KIF21AQ7Z4S6 1674 aa24.75■■□□□ 1.55
ATP1A3-204ENST00000468774 FANCD2Q9BXW9 1451 aa24.65■■□□□ 1.54
ATP1A3-204ENST00000468774 PRDM2Q13029 1718 aa24.61■■□□□ 1.53
ATP1A3-204ENST00000468774 THOC2Q8NI27 1593 aaKnown RBP24.61■■□□□ 1.53
ATP1A3-204ENST00000468774 CEP164Q9UPV0 1460 aa24.58■■□□□ 1.52
ATP1A3-204ENST00000468774 MRC2Q9UBG0 1479 aa24.51■■□□□ 1.51
ATP1A3-204ENST00000468774 CUX2O14529 1486 aa24.49■■□□□ 1.51
ATP1A3-204ENST00000468774 WDR62O43379 1518 aa24.44■■□□□ 1.5
ATP1A3-204ENST00000468774 URB2Q14146 1524 aaKnown RBP24.43■■□□□ 1.5
ATP1A3-204ENST00000468774 DNAJC5Q9H3Z4 198 aa24.39■■□□□ 1.49
ATP1A3-204ENST00000468774 TOPBP1Q92547 1522 aa24.3■■□□□ 1.48
ATP1A3-204ENST00000468774 DNMBPQ6XZF7 1577 aa24.25■■□□□ 1.47
ATP1A3-204ENST00000468774 ABCC8Q09428 1581 aa24.23■■□□□ 1.47
ATP1A3-204ENST00000468774 CUX1P39880 1505 aa24.19■■□□□ 1.46
ATP1A3-204ENST00000468774 POLA1P09884 1462 aaPredicted RBP24.1■■□□□ 1.45
ATP1A3-204ENST00000468774 FGD5Q6ZNL6 1462 aa24.07■■□□□ 1.44
ATP1A3-204ENST00000468774 IFT140Q96RY7 1462 aa24.06■■□□□ 1.44
ATP1A3-204ENST00000468774 WRNQ14191 1432 aaPredicted RBP eCLIP24.05■■□□□ 1.44
ATP1A3-204ENST00000468774 SYNJ1O43426 1573 aa24.03■■□□□ 1.44
ATP1A3-204ENST00000468774 RAD54L2Q9Y4B4 1467 aa24.03■■□□□ 1.44
ATP1A3-204ENST00000468774 TARBP1Q13395 1621 aaKnown RBP24.02■■□□□ 1.44
ATP1A3-204ENST00000468774 ZNF608Q9ULD9 1512 aaPredicted RBP24.02■■□□□ 1.44
ATP1A3-204ENST00000468774 SOGA1O94964 1423 aa24.01■■□□□ 1.43
ATP1A3-204ENST00000468774 TOP2BQ02880 1626 aa23.99■■□□□ 1.43
ATP1A3-204ENST00000468774 BIVM-ERCC5R4GMW8 1640 aa23.99■■□□□ 1.43
ATP1A3-204ENST00000468774 AQRO60306 1485 aaKnown RBP eCLIP23.89■■□□□ 1.42
ATP1A3-204ENST00000468774 TDRD9Q8NDG6 1382 aaKnown RBP23.88■■□□□ 1.41
ATP1A3-204ENST00000468774 EIF4G3O43432 1585 aaKnown RBP23.87■■□□□ 1.41
ATP1A3-204ENST00000468774 WDR97A6NE52 1622 aa23.85■■□□□ 1.41
ATP1A3-204ENST00000468774 ABCA10Q8WWZ4 1543 aa23.82■■□□□ 1.4
ATP1A3-204ENST00000468774 ABCA5Q8WWZ7 1642 aa23.72■■□□□ 1.39
ATP1A3-204ENST00000468774 GAPVD1Q14C86 1478 aa23.71■■□□□ 1.39
ATP1A3-204ENST00000468774 GRIN2BQ13224 1484 aa23.67■■□□□ 1.38
ATP1A3-204ENST00000468774 PBRM1Q86U86 1689 aa23.64■■□□□ 1.38
ATP1A3-204ENST00000468774 SNAPC4Q5SXM2 1469 aa23.63■■□□□ 1.37
ATP1A3-204ENST00000468774 TRIM41Q8WV44 630 aa23.62■■□□□ 1.37
ATP1A3-204ENST00000468774 MAGI1Q96QZ7 1491 aaPredicted RBP23.56■■□□□ 1.36
ATP1A3-204ENST00000468774 CHD1O14646 1710 aa23.56■■□□□ 1.36
ATP1A3-204ENST00000468774 OSCARQ8IYS5 282 aa23.55■■□□□ 1.36
ATP1A3-204ENST00000468774 FBLN2P98095 1184 aa23.54■■□□□ 1.36
ATP1A3-204ENST00000468774 ERICH3Q5RHP9 1530 aa23.52■■□□□ 1.36
ATP1A3-204ENST00000468774 KIF27Q86VH2 1401 aa23.51■■□□□ 1.35
ATP1A3-204ENST00000468774 CHIC1Q5VXU3 224 aa23.5■■□□□ 1.35
ATP1A3-204ENST00000468774 SYNJ2O15056 1496 aa23.49■■□□□ 1.35
ATP1A3-204ENST00000468774 RUSC2Q8N2Y8 1516 aa23.49■■□□□ 1.35
ATP1A3-204ENST00000468774 CHMP7Q8WUX9 453 aaPredicted RBP23.49■■□□□ 1.35
ATP1A3-204ENST00000468774 IGF1RP08069 1367 aa23.48■■□□□ 1.35
ATP1A3-204ENST00000468774 ADAMTS12P58397 1594 aa23.46■■□□□ 1.35
ATP1A3-204ENST00000468774 FHAD1B1AJZ9 1412 aa23.43■■□□□ 1.34
ATP1A3-204ENST00000468774 GRIN2AQ12879 1464 aa23.37■■□□□ 1.33
ATP1A3-204ENST00000468774 CUL7Q14999 1698 aa23.32■■□□□ 1.32
ATP1A3-204ENST00000468774 CARMIL1Q5VZK9 1371 aa23.3■■□□□ 1.32
ATP1A3-204ENST00000468774 CLASP1Q7Z460 1538 aa23.3■■□□□ 1.32
ATP1A3-204ENST00000468774 CEP170Q5SW79 1584 aa23.28■■□□□ 1.32
ATP1A3-204ENST00000468774 NUP160Q12769 1436 aa23.27■■□□□ 1.32
ATP1A3-204ENST00000468774 FAM9AQ8IZU1 332 aaPredicted RBP23.18■■□□□ 1.3
ATP1A3-204ENST00000468774 CSRNP3Q8WYN3 585 aa23.18■■□□□ 1.3
ATP1A3-204ENST00000468774 RIMBP3CA6NJZ7 1639 aa23.17■■□□□ 1.3
ATP1A3-204ENST00000468774 RIMBP3BA6NNM3 1639 aa23.17■■□□□ 1.3
ATP1A3-204ENST00000468774 RIMBP3Q9UFD9 1639 aa23.17■■□□□ 1.3
ATP1A3-204ENST00000468774 ARHGEF11O15085 1522 aa23.17■■□□□ 1.3
ATP1A3-204ENST00000468774 RAPGEF2Q9Y4G8 1499 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms