RNA–Protein interactions for RNA: ENST00000468602.5

MSH5-214, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-214ENST00000468602 NISCHQ9Y2I1 1504 aa26.9■■□□□ 1.9
MSH5-214ENST00000468602 CCDC180Q9P1Z9 1646 aa23.81■■□□□ 1.4
MSH5-214ENST00000468602 ABCC9O60706 1549 aa22.67■■□□□ 1.22
MSH5-214ENST00000468602 ZCCHC6Q5VYS8 1495 aaKnown RBP22.52■■□□□ 1.2
MSH5-214ENST00000468602 MYO15BQ96JP2 1530 aa22.43■■□□□ 1.18
MSH5-214ENST00000468602 DCAF1Q9Y4B6 1507 aa22.43■■□□□ 1.18
MSH5-214ENST00000468602 NACADO15069 1562 aa22.28■■□□□ 1.16
MSH5-214ENST00000468602 RB1CC1Q8TDY2 1594 aa22.15■■□□□ 1.14
MSH5-214ENST00000468602 DCAF8L2P0C7V8 631 aa21.98■■□□□ 1.11
MSH5-214ENST00000468602 UNC13AQ9UPW8 1703 aa21.61■■□□□ 1.05
MSH5-214ENST00000468602 DNAJC5BQ9UF47 199 aa21.57■■□□□ 1.04
MSH5-214ENST00000468602 SCRIBQ14160 1630 aa21.53■■□□□ 1.04
MSH5-214ENST00000468602 BICRAQ9NZM4 1560 aa21.48■■□□□ 1.03
MSH5-214ENST00000468602 SHROOM4Q9ULL8 1493 aa21.46■■□□□ 1.03
MSH5-214ENST00000468602 PABPN1Q86U42 306 aaKnown RBP eCLIP21.21■□□□□ 0.99
MSH5-214ENST00000468602 EIF4G1Q04637 1599 aaKnown RBP20.85■□□□□ 0.93
MSH5-214ENST00000468602 BAZ1AQ9NRL2 1556 aaPredicted RBP20.83■□□□□ 0.92
MSH5-214ENST00000468602 CECR2Q9BXF3 1484 aa20.82■□□□□ 0.92
MSH5-214ENST00000468602 SMARCA4P51532 1647 aa20.76■□□□□ 0.91
MSH5-214ENST00000468602 PEG3Q9GZU2 1588 aa20.7■□□□□ 0.9
MSH5-214ENST00000468602 DNAJC5Q9H3Z4 198 aa20.68■□□□□ 0.9
MSH5-214ENST00000468602 MROH2BQ7Z745 1585 aa20.68■□□□□ 0.9
MSH5-214ENST00000468602 CC2D2AQ9P2K1 1620 aa20.63■□□□□ 0.89
MSH5-214ENST00000468602 RSF1Q96T23 1441 aaPredicted RBP20.62■□□□□ 0.89
MSH5-214ENST00000468602 SMARCA2P51531 1590 aa20.59■□□□□ 0.89
MSH5-214ENST00000468602 NCAPD3P42695 1498 aa20.57■□□□□ 0.88
MSH5-214ENST00000468602 ATAD2BQ9ULI0 1458 aa20.57■□□□□ 0.88
MSH5-214ENST00000468602 HMGXB3Q12766 1538 aa20.5■□□□□ 0.87
MSH5-214ENST00000468602 WIZO95785 1651 aa20.43■□□□□ 0.86
MSH5-214ENST00000468602 BAZ1BQ9UIG0 1483 aaKnown RBP20.37■□□□□ 0.85
MSH5-214ENST00000468602 TOP2AP11388 1531 aaKnown RBP20.33■□□□□ 0.85
MSH5-214ENST00000468602 SUPT5HO00267 1087 aaKnown RBP20.14■□□□□ 0.81
MSH5-214ENST00000468602 CCDC88BA6NC98 1476 aa20.05■□□□□ 0.8
MSH5-214ENST00000468602 CFTRP13569 1480 aa19.93■□□□□ 0.78
MSH5-214ENST00000468602 CADPSQ9ULU8 1353 aa19.93■□□□□ 0.78
MSH5-214ENST00000468602 LAMC3Q9Y6N6 1575 aa19.92■□□□□ 0.78
MSH5-214ENST00000468602 PRDM2Q13029 1718 aa19.79■□□□□ 0.76
MSH5-214ENST00000468602 NESP48681 1621 aa19.76■□□□□ 0.75
MSH5-214ENST00000468602 PDS5BQ9NTI5 1447 aa19.75■□□□□ 0.75
MSH5-214ENST00000468602 FANCD2Q9BXW9 1451 aa19.64■□□□□ 0.73
MSH5-214ENST00000468602 CEP164Q9UPV0 1460 aa19.58■□□□□ 0.72
MSH5-214ENST00000468602 KIF21AQ7Z4S6 1674 aa19.57■□□□□ 0.72
MSH5-214ENST00000468602 ERCC6Q03468 1493 aa19.52■□□□□ 0.72
MSH5-214ENST00000468602 ABCC8Q09428 1581 aa19.51■□□□□ 0.71
MSH5-214ENST00000468602 MRC2Q9UBG0 1479 aa19.5■□□□□ 0.71
MSH5-214ENST00000468602 THOC2Q8NI27 1593 aaKnown RBP19.49■□□□□ 0.71
MSH5-214ENST00000468602 WDR62O43379 1518 aa19.47■□□□□ 0.71
MSH5-214ENST00000468602 URB2Q14146 1524 aaKnown RBP19.43■□□□□ 0.7
MSH5-214ENST00000468602 DNMBPQ6XZF7 1577 aa19.43■□□□□ 0.7
MSH5-214ENST00000468602 CUX2O14529 1486 aa19.42■□□□□ 0.7
MSH5-214ENST00000468602 WRNQ14191 1432 aaPredicted RBP eCLIP19.4■□□□□ 0.7
MSH5-214ENST00000468602 TOPBP1Q92547 1522 aa19.39■□□□□ 0.69
MSH5-214ENST00000468602 CUX1P39880 1505 aa19.38■□□□□ 0.69
MSH5-214ENST00000468602 TOP2BQ02880 1626 aa19.37■□□□□ 0.69
MSH5-214ENST00000468602 BIVM-ERCC5R4GMW8 1640 aa19.37■□□□□ 0.69
MSH5-214ENST00000468602 SYNJ1O43426 1573 aa19.31■□□□□ 0.68
MSH5-214ENST00000468602 POLA1P09884 1462 aaPredicted RBP19.26■□□□□ 0.67
MSH5-214ENST00000468602 FGD5Q6ZNL6 1462 aa19.23■□□□□ 0.67
MSH5-214ENST00000468602 IFT140Q96RY7 1462 aa19.22■□□□□ 0.67
MSH5-214ENST00000468602 TRIM41Q8WV44 630 aa19.21■□□□□ 0.67
MSH5-214ENST00000468602 CHIC1Q5VXU3 224 aa19.19■□□□□ 0.66
MSH5-214ENST00000468602 TARBP1Q13395 1621 aaKnown RBP19.18■□□□□ 0.66
MSH5-214ENST00000468602 WDR97A6NE52 1622 aa19.18■□□□□ 0.66
MSH5-214ENST00000468602 SOGA1O94964 1423 aa19.16■□□□□ 0.66
MSH5-214ENST00000468602 ABCA10Q8WWZ4 1543 aa19.15■□□□□ 0.66
MSH5-214ENST00000468602 RAD54L2Q9Y4B4 1467 aa19.09■□□□□ 0.65
MSH5-214ENST00000468602 ABCA5Q8WWZ7 1642 aa19.02■□□□□ 0.64
MSH5-214ENST00000468602 ZNF608Q9ULD9 1512 aaPredicted RBP19■□□□□ 0.63
MSH5-214ENST00000468602 KIF27Q86VH2 1401 aa18.98■□□□□ 0.63
MSH5-214ENST00000468602 EEA1Q15075 1411 aa18.96■□□□□ 0.63
MSH5-214ENST00000468602 EIF4G3O43432 1585 aaKnown RBP18.96■□□□□ 0.63
MSH5-214ENST00000468602 GAPVD1Q14C86 1478 aa18.96■□□□□ 0.63
MSH5-214ENST00000468602 ERICH3Q5RHP9 1530 aa18.95■□□□□ 0.62
MSH5-214ENST00000468602 TDRD9Q8NDG6 1382 aaKnown RBP18.93■□□□□ 0.62
MSH5-214ENST00000468602 GRIN2BQ13224 1484 aa18.93■□□□□ 0.62
MSH5-214ENST00000468602 AQRO60306 1485 aaKnown RBP eCLIP18.92■□□□□ 0.624e-14■■■■■ 36.3
MSH5-214ENST00000468602 IGF1RP08069 1367 aa18.88■□□□□ 0.61
MSH5-214ENST00000468602 MAGI1Q96QZ7 1491 aaPredicted RBP18.87■□□□□ 0.61
MSH5-214ENST00000468602 PBRM1Q86U86 1689 aa18.86■□□□□ 0.61
MSH5-214ENST00000468602 RUSC2Q8N2Y8 1516 aa18.83■□□□□ 0.6
MSH5-214ENST00000468602 CUL7Q14999 1698 aa18.82■□□□□ 0.6
MSH5-214ENST00000468602 FHAD1B1AJZ9 1412 aa18.79■□□□□ 0.6
MSH5-214ENST00000468602 SNAPC4Q5SXM2 1469 aa18.77■□□□□ 0.6
MSH5-214ENST00000468602 PRXQ9BXM0 1461 aa18.77■□□□□ 0.6
MSH5-214ENST00000468602 ADAMTS12P58397 1594 aa18.77■□□□□ 0.6
MSH5-214ENST00000468602 SYNJ2O15056 1496 aa18.77■□□□□ 0.59
MSH5-214ENST00000468602 CSRNP3Q8WYN3 585 aa18.76■□□□□ 0.59
MSH5-214ENST00000468602 CARMIL1Q5VZK9 1371 aa18.73■□□□□ 0.59
MSH5-214ENST00000468602 KIF21BO75037 1637 aa18.68■□□□□ 0.58
MSH5-214ENST00000468602 RAPGEF2Q9Y4G8 1499 aa18.68■□□□□ 0.58
MSH5-214ENST00000468602 GRIN2AQ12879 1464 aa18.67■□□□□ 0.58
MSH5-214ENST00000468602 NUP160Q12769 1436 aa18.64■□□□□ 0.57
MSH5-214ENST00000468602 CHMP7Q8WUX9 453 aaPredicted RBP18.62■□□□□ 0.57
MSH5-214ENST00000468602 CHD1O14646 1710 aa18.62■□□□□ 0.57
MSH5-214ENST00000468602 GOLGA3Q08378 1498 aa18.55■□□□□ 0.56
MSH5-214ENST00000468602 OSCARQ8IYS5 282 aa18.54■□□□□ 0.56
MSH5-214ENST00000468602 CEP170Q5SW79 1584 aa18.54■□□□□ 0.56
MSH5-214ENST00000468602 CLASP1Q7Z460 1538 aa18.54■□□□□ 0.56
MSH5-214ENST00000468602 KIAA0586Q9BVV6 1533 aa18.54■□□□□ 0.56
MSH5-214ENST00000468602 FAM9AQ8IZU1 332 aaPredicted RBP18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms