RNA–Protein interactions for RNA: ENST00000468469.5

COMMD3-207, Transcript of COMM domain containing 3, humanhuman

TSL 3

Gene COMMD3, Length 526 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-207ENST00000468469 AEBP2Q6ZN18 517 aaPredicted RBP10.08□□□□□ -0.8
COMMD3-207ENST00000468469 CHIC1Q5VXU3 224 aa9.36□□□□□ -0.91
COMMD3-207ENST00000468469 NISCHQ9Y2I1 1504 aa8.78□□□□□ -1
COMMD3-207ENST00000468469 SENP3Q9H4L4 574 aaPredicted RBP8.61□□□□□ -1.03
COMMD3-207ENST00000468469 PHF23Q9BUL5 403 aaPredicted RBP8.46□□□□□ -1.06
COMMD3-207ENST00000468469 POTEDQ86YR6 584 aa8.14□□□□□ -1.11
COMMD3-207ENST00000468469 FOXD1Q16676 465 aa8.1□□□□□ -1.11
COMMD3-207ENST00000468469 CCDC180Q9P1Z9 1646 aa7.83□□□□□ -1.16
COMMD3-207ENST00000468469 MSH5O43196 834 aa7.68□□□□□ -1.18
COMMD3-207ENST00000468469 ABCC9O60706 1549 aa7.59□□□□□ -1.19
COMMD3-207ENST00000468469 PIAS4Q8N2W9 510 aaPredicted RBP7.47□□□□□ -1.21
COMMD3-207ENST00000468469 ZCCHC6Q5VYS8 1495 aaKnown RBP7.36□□□□□ -1.23
COMMD3-207ENST00000468469 RB1CC1Q8TDY2 1594 aa7.33□□□□□ -1.24
COMMD3-207ENST00000468469 NACADO15069 1562 aa7.33□□□□□ -1.24
COMMD3-207ENST00000468469 PPP6R1Q9UPN7 881 aa7.31□□□□□ -1.24
COMMD3-207ENST00000468469 MYO15BQ96JP2 1530 aa7.29□□□□□ -1.24
COMMD3-207ENST00000468469 DCAF1Q9Y4B6 1507 aa7.28□□□□□ -1.24
COMMD3-207ENST00000468469 DCAF8L2P0C7V8 631 aa7.26□□□□□ -1.25
COMMD3-207ENST00000468469 ADRA2BP18089 450 aa7.26□□□□□ -1.25
COMMD3-207ENST00000468469 PLPPR3Q6T4P5 718 aa7.17□□□□□ -1.26
COMMD3-207ENST00000468469 SCRIBQ14160 1630 aa7.15□□□□□ -1.27
COMMD3-207ENST00000468469 UNC13AQ9UPW8 1703 aa7.14□□□□□ -1.27
COMMD3-207ENST00000468469 BICRAQ9NZM4 1560 aa7.09□□□□□ -1.27
COMMD3-207ENST00000468469 SHROOM4Q9ULL8 1493 aa7.07□□□□□ -1.28
COMMD3-207ENST00000468469 PABPN1Q86U42 306 aaKnown RBP eCLIP7.05□□□□□ -1.28
COMMD3-207ENST00000468469 EIF4G1Q04637 1599 aaKnown RBP6.92□□□□□ -1.3
COMMD3-207ENST00000468469 CC2D2AQ9P2K1 1620 aa6.87□□□□□ -1.31
COMMD3-207ENST00000468469 DNAJC5BQ9UF47 199 aa6.85□□□□□ -1.31
COMMD3-207ENST00000468469 SMARCA4P51532 1647 aa6.83□□□□□ -1.32
COMMD3-207ENST00000468469 BAZ1AQ9NRL2 1556 aaPredicted RBP6.82□□□□□ -1.32
COMMD3-207ENST00000468469 CECR2Q9BXF3 1484 aa6.82□□□□□ -1.32
COMMD3-207ENST00000468469 CACNB1Q02641 598 aaPredicted RBP6.82□□□□□ -1.32
COMMD3-207ENST00000468469 MAPK8IP2Q13387 824 aaPredicted RBP6.78□□□□□ -1.32
COMMD3-207ENST00000468469 DMRT2Q9Y5R5 561 aa6.78□□□□□ -1.32
COMMD3-207ENST00000468469 SMARCA2P51531 1590 aa6.78□□□□□ -1.32
COMMD3-207ENST00000468469 MROH2BQ7Z745 1585 aa6.77□□□□□ -1.33
COMMD3-207ENST00000468469 ATAD2BQ9ULI0 1458 aa6.76□□□□□ -1.33
COMMD3-207ENST00000468469 PEG3Q9GZU2 1588 aa6.75□□□□□ -1.33
COMMD3-207ENST00000468469 HMGXB3Q12766 1538 aa6.75□□□□□ -1.33
COMMD3-207ENST00000468469 NCAPD3P42695 1498 aa6.73□□□□□ -1.33
COMMD3-207ENST00000468469 BAZ1BQ9UIG0 1483 aaKnown RBP6.73□□□□□ -1.33
COMMD3-207ENST00000468469 WIZO95785 1651 aa6.7□□□□□ -1.34
COMMD3-207ENST00000468469 RSF1Q96T23 1441 aaPredicted RBP6.69□□□□□ -1.34
COMMD3-207ENST00000468469 TOP2AP11388 1531 aaKnown RBP6.66□□□□□ -1.34
COMMD3-207ENST00000468469 SCAF1Q9H7N4 1312 aaKnown RBP6.58□□□□□ -1.36
COMMD3-207ENST00000468469 LAMC3Q9Y6N6 1575 aa6.58□□□□□ -1.36
COMMD3-207ENST00000468469 NESP48681 1621 aa6.58□□□□□ -1.36
COMMD3-207ENST00000468469 ERCC6Q03468 1493 aa6.56□□□□□ -1.36
COMMD3-207ENST00000468469 RNF39Q9H2S5 420 aa6.55□□□□□ -1.36
COMMD3-207ENST00000468469 CADPSQ9ULU8 1353 aa6.54□□□□□ -1.36
COMMD3-207ENST00000468469 CCDC88BA6NC98 1476 aa6.53□□□□□ -1.36
COMMD3-207ENST00000468469 CFTRP13569 1480 aa6.53□□□□□ -1.36
COMMD3-207ENST00000468469 DCAF8L1A6NGE4 600 aa6.52□□□□□ -1.37
COMMD3-207ENST00000468469 SUPT5HO00267 1087 aaKnown RBP6.52□□□□□ -1.37
COMMD3-207ENST00000468469 KIF21AQ7Z4S6 1674 aa6.52□□□□□ -1.37
COMMD3-207ENST00000468469 PDS5BQ9NTI5 1447 aa6.51□□□□□ -1.37
COMMD3-207ENST00000468469 THOC2Q8NI27 1593 aaKnown RBP6.51□□□□□ -1.37
COMMD3-207ENST00000468469 CEP164Q9UPV0 1460 aa6.5□□□□□ -1.37
COMMD3-207ENST00000468469 PRDM2Q13029 1718 aa6.5□□□□□ -1.37
COMMD3-207ENST00000468469 FANCD2Q9BXW9 1451 aa6.49□□□□□ -1.37
COMMD3-207ENST00000468469 CUX2O14529 1486 aa6.47□□□□□ -1.37
COMMD3-207ENST00000468469 MRC2Q9UBG0 1479 aa6.47□□□□□ -1.37
COMMD3-207ENST00000468469 WDR62O43379 1518 aa6.46□□□□□ -1.37
COMMD3-207ENST00000468469 URB2Q14146 1524 aaKnown RBP6.42□□□□□ -1.38
COMMD3-207ENST00000468469 DNMBPQ6XZF7 1577 aa6.4□□□□□ -1.38
COMMD3-207ENST00000468469 C1QBPQ07021 282 aaKnown RBP6.4□□□□□ -1.38
COMMD3-207ENST00000468469 HOXD11P31277 338 aaPredicted RBP6.39□□□□□ -1.39
COMMD3-207ENST00000468469 TOPBP1Q92547 1522 aa6.39□□□□□ -1.39
COMMD3-207ENST00000468469 ABCC8Q09428 1581 aa6.38□□□□□ -1.39
COMMD3-207ENST00000468469 CUX1P39880 1505 aa6.36□□□□□ -1.39
COMMD3-207ENST00000468469 IFT140Q96RY7 1462 aa6.34□□□□□ -1.39
COMMD3-207ENST00000468469 POLA1P09884 1462 aaPredicted RBP6.34□□□□□ -1.4
COMMD3-207ENST00000468469 FGD5Q6ZNL6 1462 aa6.34□□□□□ -1.4
COMMD3-207ENST00000468469 WRNQ14191 1432 aaPredicted RBP eCLIP6.33□□□□□ -1.4
COMMD3-207ENST00000468469 BIVM-ERCC5R4GMW8 1640 aa6.32□□□□□ -1.4
COMMD3-207ENST00000468469 SYNJ1O43426 1573 aa6.32□□□□□ -1.4
COMMD3-207ENST00000468469 EIF4G3O43432 1585 aaKnown RBP6.32□□□□□ -1.4
COMMD3-207ENST00000468469 TOP2BQ02880 1626 aa6.32□□□□□ -1.4
COMMD3-207ENST00000468469 TARBP1Q13395 1621 aaKnown RBP6.31□□□□□ -1.4
COMMD3-207ENST00000468469 ZNF608Q9ULD9 1512 aaPredicted RBP6.3□□□□□ -1.4
COMMD3-207ENST00000468469 WDR97A6NE52 1622 aa6.3□□□□□ -1.4
COMMD3-207ENST00000468469 POTEHQ6S545 545 aa6.3□□□□□ -1.4
COMMD3-207ENST00000468469 RAD54L2Q9Y4B4 1467 aa6.29□□□□□ -1.4
COMMD3-207ENST00000468469 SOGA1O94964 1423 aa6.28□□□□□ -1.4
COMMD3-207ENST00000468469 ABCA10Q8WWZ4 1543 aa6.27□□□□□ -1.41
COMMD3-207ENST00000468469 ABCA5Q8WWZ7 1642 aa6.26□□□□□ -1.41
COMMD3-207ENST00000468469 PPP4R3CPQ6ZMV5 832 aa6.25□□□□□ -1.41
COMMD3-207ENST00000468469 AQRO60306 1485 aaKnown RBP eCLIP6.25□□□□□ -1.416e-7■■■■□ 24.7
COMMD3-207ENST00000468469 PBRM1Q86U86 1689 aa6.25□□□□□ -1.41
COMMD3-207ENST00000468469 SNAPC4Q5SXM2 1469 aa6.24□□□□□ -1.41
COMMD3-207ENST00000468469 TDRD9Q8NDG6 1382 aaKnown RBP6.24□□□□□ -1.41
COMMD3-207ENST00000468469 RNF216Q9NWF9 866 aaPredicted RBP6.24□□□□□ -1.41
COMMD3-207ENST00000468469 GRIN2BQ13224 1484 aa6.23□□□□□ -1.41
COMMD3-207ENST00000468469 GAPVD1Q14C86 1478 aa6.23□□□□□ -1.41
COMMD3-207ENST00000468469 MAGI1Q96QZ7 1491 aaPredicted RBP6.22□□□□□ -1.41
COMMD3-207ENST00000468469 ADAMTS12P58397 1594 aa6.22□□□□□ -1.41
COMMD3-207ENST00000468469 CHD1O14646 1710 aa6.21□□□□□ -1.42
COMMD3-207ENST00000468469 ERICH3Q5RHP9 1530 aa6.2□□□□□ -1.42
COMMD3-207ENST00000468469 CNKSR2Q8WXI2 1034 aa6.2□□□□□ -1.42
COMMD3-207ENST00000468469 SYNJ2O15056 1496 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms