RNA–Protein interactions for RNA: ENST00000468337.1

ARPC1B-215, Transcript of actin related protein 2/3 complex subunit 1B, humanhuman

Gene ARPC1B, Length 890 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1B-215ENST00000468337 NISCHQ9Y2I1 1504 aa31.84■■■□□ 2.69
ARPC1B-215ENST00000468337 CCDC180Q9P1Z9 1646 aa27.89■■■□□ 2.06
ARPC1B-215ENST00000468337 ZCCHC6Q5VYS8 1495 aaKnown RBP26.74■■□□□ 1.87
ARPC1B-215ENST00000468337 ABCC9O60706 1549 aa26.39■■□□□ 1.82
ARPC1B-215ENST00000468337 DCAF8L2P0C7V8 631 aa26.37■■□□□ 1.81
ARPC1B-215ENST00000468337 DCAF1Q9Y4B6 1507 aa26.34■■□□□ 1.81
ARPC1B-215ENST00000468337 MYO15BQ96JP2 1530 aa26.08■■□□□ 1.77
ARPC1B-215ENST00000468337 NACADO15069 1562 aa25.99■■□□□ 1.75
ARPC1B-215ENST00000468337 SHROOM4Q9ULL8 1493 aa25.91■■□□□ 1.74
ARPC1B-215ENST00000468337 RB1CC1Q8TDY2 1594 aa25.8■■□□□ 1.72
ARPC1B-215ENST00000468337 SCRIBQ14160 1630 aa25.61■■□□□ 1.69
ARPC1B-215ENST00000468337 UNC13AQ9UPW8 1703 aa25.17■■□□□ 1.62
ARPC1B-215ENST00000468337 SUPT5HO00267 1087 aaKnown RBP24.9■■□□□ 1.58
ARPC1B-215ENST00000468337 BICRAQ9NZM4 1560 aa24.89■■□□□ 1.58
ARPC1B-215ENST00000468337 PABPN1Q86U42 306 aaKnown RBP eCLIP24.83■■□□□ 1.57
ARPC1B-215ENST00000468337 CECR2Q9BXF3 1484 aa24.69■■□□□ 1.54
ARPC1B-215ENST00000468337 BAZ1AQ9NRL2 1556 aaPredicted RBP24.65■■□□□ 1.54
ARPC1B-215ENST00000468337 RSF1Q96T23 1441 aaPredicted RBP24.63■■□□□ 1.53
ARPC1B-215ENST00000468337 MROH2BQ7Z745 1585 aa24.57■■□□□ 1.52
ARPC1B-215ENST00000468337 SMARCA4P51532 1647 aa24.53■■□□□ 1.52
ARPC1B-215ENST00000468337 WIZO95785 1651 aa24.37■■□□□ 1.49
ARPC1B-215ENST00000468337 EIF4G1Q04637 1599 aaKnown RBP24.22■■□□□ 1.47
ARPC1B-215ENST00000468337 PEG3Q9GZU2 1588 aa24.2■■□□□ 1.46
ARPC1B-215ENST00000468337 TOP2AP11388 1531 aaKnown RBP24.19■■□□□ 1.46
ARPC1B-215ENST00000468337 SMARCA2P51531 1590 aa24.18■■□□□ 1.46
ARPC1B-215ENST00000468337 ATAD2BQ9ULI0 1458 aa24.11■■□□□ 1.45
ARPC1B-215ENST00000468337 BAZ1BQ9UIG0 1483 aaKnown RBP24.05■■□□□ 1.44
ARPC1B-215ENST00000468337 HMGXB3Q12766 1538 aa23.94■■□□□ 1.42
ARPC1B-215ENST00000468337 NCAPD3P42695 1498 aa23.92■■□□□ 1.42
ARPC1B-215ENST00000468337 CC2D2AQ9P2K1 1620 aa23.88■■□□□ 1.41
ARPC1B-215ENST00000468337 CCDC88BA6NC98 1476 aa23.87■■□□□ 1.41
ARPC1B-215ENST00000468337 CHIC1Q5VXU3 224 aa23.73■■□□□ 1.39
ARPC1B-215ENST00000468337 TRIM41Q8WV44 630 aa23.46■■□□□ 1.35
ARPC1B-215ENST00000468337 CFTRP13569 1480 aa23.36■■□□□ 1.33
ARPC1B-215ENST00000468337 ABCC8Q09428 1581 aa23.35■■□□□ 1.33
ARPC1B-215ENST00000468337 CADPSQ9ULU8 1353 aa23.32■■□□□ 1.32
ARPC1B-215ENST00000468337 PRDM2Q13029 1718 aa23.32■■□□□ 1.32
ARPC1B-215ENST00000468337 WRNQ14191 1432 aaPredicted RBP eCLIP23.26■■□□□ 1.31
ARPC1B-215ENST00000468337 DNAJC5BQ9UF47 199 aa23.19■■□□□ 1.3
ARPC1B-215ENST00000468337 LAMC3Q9Y6N6 1575 aa23.18■■□□□ 1.3
ARPC1B-215ENST00000468337 SYNJ1O43426 1573 aa23.12■■□□□ 1.29
ARPC1B-215ENST00000468337 NESP48681 1621 aa23.09■■□□□ 1.29
ARPC1B-215ENST00000468337 FANCD2Q9BXW9 1451 aa23.08■■□□□ 1.29
ARPC1B-215ENST00000468337 TOP2BQ02880 1626 aa23.07■■□□□ 1.28
ARPC1B-215ENST00000468337 BIVM-ERCC5R4GMW8 1640 aa23.05■■□□□ 1.28
ARPC1B-215ENST00000468337 PDS5BQ9NTI5 1447 aa23.02■■□□□ 1.28
ARPC1B-215ENST00000468337 FAM9AQ8IZU1 332 aaPredicted RBP23■■□□□ 1.27
ARPC1B-215ENST00000468337 CEP164Q9UPV0 1460 aa22.99■■□□□ 1.27
ARPC1B-215ENST00000468337 CUX1P39880 1505 aa22.99■■□□□ 1.27
ARPC1B-215ENST00000468337 EEA1Q15075 1411 aa22.95■■□□□ 1.26
ARPC1B-215ENST00000468337 DNMBPQ6XZF7 1577 aa22.89■■□□□ 1.25
ARPC1B-215ENST00000468337 KIF21AQ7Z4S6 1674 aa22.87■■□□□ 1.25
ARPC1B-215ENST00000468337 SOGA1O94964 1423 aa22.86■■□□□ 1.25
ARPC1B-215ENST00000468337 TOPBP1Q92547 1522 aa22.82■■□□□ 1.24
ARPC1B-215ENST00000468337 FGD5Q6ZNL6 1462 aa22.8■■□□□ 1.24
ARPC1B-215ENST00000468337 LOC105371045A0A1W2PR82 267 aa22.79■■□□□ 1.24
ARPC1B-215ENST00000468337 URB2Q14146 1524 aaKnown RBP22.75■■□□□ 1.23
ARPC1B-215ENST00000468337 RUSC2Q8N2Y8 1516 aa22.75■■□□□ 1.23
ARPC1B-215ENST00000468337 CSRNP3Q8WYN3 585 aa22.74■■□□□ 1.23
ARPC1B-215ENST00000468337 ERCC6Q03468 1493 aa22.73■■□□□ 1.23
ARPC1B-215ENST00000468337 MRC2Q9UBG0 1479 aa22.73■■□□□ 1.23
ARPC1B-215ENST00000468337 KIF27Q86VH2 1401 aa22.72■■□□□ 1.23
ARPC1B-215ENST00000468337 POLA1P09884 1462 aaPredicted RBP22.68■■□□□ 1.22
ARPC1B-215ENST00000468337 EHMT2Q96KQ7 1210 aa22.67■■□□□ 1.22
ARPC1B-215ENST00000468337 CUX2O14529 1486 aa22.66■■□□□ 1.22
ARPC1B-215ENST00000468337 GOLGA3Q08378 1498 aa22.61■■□□□ 1.21
ARPC1B-215ENST00000468337 KIF21BO75037 1637 aa22.61■■□□□ 1.21
ARPC1B-215ENST00000468337 ABCA10Q8WWZ4 1543 aa22.59■■□□□ 1.21
ARPC1B-215ENST00000468337 RAD54L2Q9Y4B4 1467 aa22.59■■□□□ 1.21
ARPC1B-215ENST00000468337 WDR62O43379 1518 aa22.58■■□□□ 1.21
ARPC1B-215ENST00000468337 WDR97A6NE52 1622 aa22.52■■□□□ 1.2
ARPC1B-215ENST00000468337 THOC2Q8NI27 1593 aaKnown RBP22.51■■□□□ 1.19
ARPC1B-215ENST00000468337 UBTFP17480 764 aaKnown RBP22.5■■□□□ 1.19
ARPC1B-215ENST00000468337 ERICH3Q5RHP9 1530 aa22.48■■□□□ 1.19
ARPC1B-215ENST00000468337 TNIKQ9UKE5 1360 aa22.47■■□□□ 1.19
ARPC1B-215ENST00000468337 PRXQ9BXM0 1461 aa22.46■■□□□ 1.19
ARPC1B-215ENST00000468337 TARBP1Q13395 1621 aaKnown RBP22.44■■□□□ 1.18
ARPC1B-215ENST00000468337 IFT140Q96RY7 1462 aa22.44■■□□□ 1.18
ARPC1B-215ENST00000468337 RAPGEF2Q9Y4G8 1499 aa22.43■■□□□ 1.18
ARPC1B-215ENST00000468337 ABCA5Q8WWZ7 1642 aa22.42■■□□□ 1.18
ARPC1B-215ENST00000468337 IGF1RP08069 1367 aa22.4■■□□□ 1.18
ARPC1B-215ENST00000468337 GAPVD1Q14C86 1478 aa22.39■■□□□ 1.17
ARPC1B-215ENST00000468337 CUL7Q14999 1698 aa22.38■■□□□ 1.17
ARPC1B-215ENST00000468337 TDRD9Q8NDG6 1382 aaKnown RBP22.38■■□□□ 1.17
ARPC1B-215ENST00000468337 CARMIL1Q5VZK9 1371 aa22.37■■□□□ 1.17
ARPC1B-215ENST00000468337 CEP162Q5TB80 1403 aa22.34■■□□□ 1.17
ARPC1B-215ENST00000468337 PBRM1Q86U86 1689 aa22.3■■□□□ 1.16
ARPC1B-215ENST00000468337 GRIN2BQ13224 1484 aa22.25■■□□□ 1.15
ARPC1B-215ENST00000468337 AQRO60306 1485 aaKnown RBP eCLIP22.24■■□□□ 1.15
ARPC1B-215ENST00000468337 EIF4G3O43432 1585 aaKnown RBP22.22■■□□□ 1.15
ARPC1B-215ENST00000468337 CLIP1P30622 1438 aa22.22■■□□□ 1.15
ARPC1B-215ENST00000468337 ZNF608Q9ULD9 1512 aaPredicted RBP22.21■■□□□ 1.15
ARPC1B-215ENST00000468337 ADAMTS12P58397 1594 aa22.16■■□□□ 1.14
ARPC1B-215ENST00000468337 FHAD1B1AJZ9 1412 aa22.16■■□□□ 1.14
ARPC1B-215ENST00000468337 RANGAP1P46060 587 aaPredicted RBP22.14■■□□□ 1.13
ARPC1B-215ENST00000468337 CTTNBP2Q8WZ74 1663 aa22.11■■□□□ 1.13
ARPC1B-215ENST00000468337 SNAPC4Q5SXM2 1469 aa22.1■■□□□ 1.13
ARPC1B-215ENST00000468337 MAGI1Q96QZ7 1491 aaPredicted RBP22.08■■□□□ 1.12
ARPC1B-215ENST00000468337 VPS8Q8N3P4 1428 aa22■■□□□ 1.11
ARPC1B-215ENST00000468337 SYNJ2O15056 1496 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms