RNA–Protein interactions for RNA: ENST00000467870.1

RPL3P3-201, Transcript of ribosomal protein L3 pseudogene 3, humanhuman

BASIC

Gene RPL3P3, Length 1,213 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3P3-201ENST00000467870 NISCHQ9Y2I1 1504 aa22.74■■□□□ 1.23
RPL3P3-201ENST00000467870 ABCC9O60706 1549 aa20.22■□□□□ 0.83
RPL3P3-201ENST00000467870 CCDC180Q9P1Z9 1646 aa19.86■□□□□ 0.77
RPL3P3-201ENST00000467870 DNAJC5BQ9UF47 199 aa19.23■□□□□ 0.67
RPL3P3-201ENST00000467870 DCAF8L2P0C7V8 631 aa19.1■□□□□ 0.65
RPL3P3-201ENST00000467870 RB1CC1Q8TDY2 1594 aa19.05■□□□□ 0.64
RPL3P3-201ENST00000467870 ZCCHC6Q5VYS8 1495 aaKnown RBP19.01■□□□□ 0.63
RPL3P3-201ENST00000467870 AEBP2Q6ZN18 517 aaPredicted RBP18.94■□□□□ 0.62
RPL3P3-201ENST00000467870 DCAF1Q9Y4B6 1507 aa18.83■□□□□ 0.6
RPL3P3-201ENST00000467870 NACADO15069 1562 aa18.81■□□□□ 0.6
RPL3P3-201ENST00000467870 PABPN1Q86U42 306 aaKnown RBP eCLIP18.81■□□□□ 0.6
RPL3P3-201ENST00000467870 MYO15BQ96JP2 1530 aa18.7■□□□□ 0.58
RPL3P3-201ENST00000467870 CHIC1Q5VXU3 224 aa18.69■□□□□ 0.58
RPL3P3-201ENST00000467870 UNC13AQ9UPW8 1703 aa18.63■□□□□ 0.57
RPL3P3-201ENST00000467870 BICRAQ9NZM4 1560 aa18.49■□□□□ 0.55
RPL3P3-201ENST00000467870 SHROOM4Q9ULL8 1493 aa18.44■□□□□ 0.54
RPL3P3-201ENST00000467870 SCRIBQ14160 1630 aa18.23■□□□□ 0.51
RPL3P3-201ENST00000467870 CECR2Q9BXF3 1484 aa18.21■□□□□ 0.51
RPL3P3-201ENST00000467870 CC2D2AQ9P2K1 1620 aa18.21■□□□□ 0.51
RPL3P3-201ENST00000467870 EIF4G1Q04637 1599 aaKnown RBP18.08■□□□□ 0.48
RPL3P3-201ENST00000467870 DNAJC5Q9H3Z4 198 aa17.84■□□□□ 0.45
RPL3P3-201ENST00000467870 SUPT5HO00267 1087 aaKnown RBP17.77■□□□□ 0.44
RPL3P3-201ENST00000467870 BAZ1AQ9NRL2 1556 aaPredicted RBP17.61■□□□□ 0.41
RPL3P3-201ENST00000467870 RSF1Q96T23 1441 aaPredicted RBP17.57■□□□□ 0.4
RPL3P3-201ENST00000467870 MROH2BQ7Z745 1585 aa17.5■□□□□ 0.39
RPL3P3-201ENST00000467870 CUX2O14529 1486 aa17.48■□□□□ 0.39
RPL3P3-201ENST00000467870 ERCC6Q03468 1493 aa17.48■□□□□ 0.39
RPL3P3-201ENST00000467870 SMARCA4P51532 1647 aa17.46■□□□□ 0.39
RPL3P3-201ENST00000467870 NCAPD3P42695 1498 aa17.38■□□□□ 0.37
RPL3P3-201ENST00000467870 SMARCA2P51531 1590 aa17.33■□□□□ 0.37
RPL3P3-201ENST00000467870 WIZO95785 1651 aa17.31■□□□□ 0.36
RPL3P3-201ENST00000467870 ATAD2BQ9ULI0 1458 aa17.31■□□□□ 0.36
RPL3P3-201ENST00000467870 NESP48681 1621 aa17.28■□□□□ 0.36
RPL3P3-201ENST00000467870 PEG3Q9GZU2 1588 aa17.27■□□□□ 0.35
RPL3P3-201ENST00000467870 BAZ1BQ9UIG0 1483 aaKnown RBP17.24■□□□□ 0.35
RPL3P3-201ENST00000467870 HMGXB3Q12766 1538 aa17.21■□□□□ 0.35
RPL3P3-201ENST00000467870 TOP2AP11388 1531 aaKnown RBP17.21■□□□□ 0.34
RPL3P3-201ENST00000467870 THOC2Q8NI27 1593 aaKnown RBP17.1■□□□□ 0.33
RPL3P3-201ENST00000467870 CCDC88BA6NC98 1476 aa17.05■□□□□ 0.32
RPL3P3-201ENST00000467870 LAMC3Q9Y6N6 1575 aa17.04■□□□□ 0.32
RPL3P3-201ENST00000467870 TRIM41Q8WV44 630 aa17.04■□□□□ 0.32
RPL3P3-201ENST00000467870 KIF21AQ7Z4S6 1674 aa17.01■□□□□ 0.31
RPL3P3-201ENST00000467870 PDS5BQ9NTI5 1447 aa16.98■□□□□ 0.31
RPL3P3-201ENST00000467870 CADPSQ9ULU8 1353 aa16.88■□□□□ 0.29
RPL3P3-201ENST00000467870 MRC2Q9UBG0 1479 aa16.85■□□□□ 0.29
RPL3P3-201ENST00000467870 WDR62O43379 1518 aa16.8■□□□□ 0.28
RPL3P3-201ENST00000467870 CFTRP13569 1480 aa16.76■□□□□ 0.27
RPL3P3-201ENST00000467870 CEP164Q9UPV0 1460 aa16.73■□□□□ 0.27
RPL3P3-201ENST00000467870 FANCD2Q9BXW9 1451 aa16.69■□□□□ 0.26
RPL3P3-201ENST00000467870 OSCARQ8IYS5 282 aa16.69■□□□□ 0.26
RPL3P3-201ENST00000467870 WRNQ14191 1432 aaPredicted RBP eCLIP16.61■□□□□ 0.25
RPL3P3-201ENST00000467870 URB2Q14146 1524 aaKnown RBP16.56■□□□□ 0.24
RPL3P3-201ENST00000467870 ABCC8Q09428 1581 aa16.53■□□□□ 0.24
RPL3P3-201ENST00000467870 PRDM2Q13029 1718 aa16.49■□□□□ 0.23
RPL3P3-201ENST00000467870 RIMBP3CA6NJZ7 1639 aa16.48■□□□□ 0.23
RPL3P3-201ENST00000467870 RIMBP3BA6NNM3 1639 aa16.48■□□□□ 0.23
RPL3P3-201ENST00000467870 RIMBP3Q9UFD9 1639 aa16.48■□□□□ 0.23
RPL3P3-201ENST00000467870 ZNF608Q9ULD9 1512 aaPredicted RBP16.43■□□□□ 0.22
RPL3P3-201ENST00000467870 PHF23Q9BUL5 403 aaPredicted RBP16.42■□□□□ 0.22
RPL3P3-201ENST00000467870 FAM9AQ8IZU1 332 aaPredicted RBP16.41■□□□□ 0.22
RPL3P3-201ENST00000467870 TOP2BQ02880 1626 aa16.4■□□□□ 0.22
RPL3P3-201ENST00000467870 IFT140Q96RY7 1462 aa16.4■□□□□ 0.22
RPL3P3-201ENST00000467870 ARHGEF11O15085 1522 aa16.4■□□□□ 0.22
RPL3P3-201ENST00000467870 SYNJ1O43426 1573 aa16.38■□□□□ 0.21
RPL3P3-201ENST00000467870 CUX1P39880 1505 aa16.37■□□□□ 0.21
RPL3P3-201ENST00000467870 CYB5RLQ6IPT4 315 aa16.36■□□□□ 0.21
RPL3P3-201ENST00000467870 EEA1Q15075 1411 aa16.35■□□□□ 0.21
RPL3P3-201ENST00000467870 DNMBPQ6XZF7 1577 aa16.34■□□□□ 0.21
RPL3P3-201ENST00000467870 TOPBP1Q92547 1522 aa16.34■□□□□ 0.21
RPL3P3-201ENST00000467870 BIVM-ERCC5R4GMW8 1640 aa16.34■□□□□ 0.21
RPL3P3-201ENST00000467870 TRHP20396 242 aaPredicted RBP16.32■□□□□ 0.2
RPL3P3-201ENST00000467870 CSRNP3Q8WYN3 585 aa16.32■□□□□ 0.2
RPL3P3-201ENST00000467870 EIF4G3O43432 1585 aaKnown RBP16.3■□□□□ 0.2
RPL3P3-201ENST00000467870 SOGA1O94964 1423 aa16.3■□□□□ 0.2
RPL3P3-201ENST00000467870 FBLN2P98095 1184 aa16.29■□□□□ 0.2
RPL3P3-201ENST00000467870 FGD5Q6ZNL6 1462 aa16.29■□□□□ 0.2
RPL3P3-201ENST00000467870 KIF27Q86VH2 1401 aa16.27■□□□□ 0.19
RPL3P3-201ENST00000467870 AQRO60306 1485 aaKnown RBP eCLIP16.26■□□□□ 0.19
RPL3P3-201ENST00000467870 CHD1O14646 1710 aa16.25■□□□□ 0.19
RPL3P3-201ENST00000467870 POLA1P09884 1462 aaPredicted RBP16.22■□□□□ 0.19
RPL3P3-201ENST00000467870 ARAP1Q96P48 1450 aa16.22■□□□□ 0.19
RPL3P3-201ENST00000467870 LOC105371045A0A1W2PR82 267 aa16.19■□□□□ 0.18
RPL3P3-201ENST00000467870 TARBP1Q13395 1621 aaKnown RBP16.19■□□□□ 0.18
RPL3P3-201ENST00000467870 RAD54L2Q9Y4B4 1467 aa16.17■□□□□ 0.18
RPL3P3-201ENST00000467870 RUSC2Q8N2Y8 1516 aa16.15■□□□□ 0.18
RPL3P3-201ENST00000467870 ABCA10Q8WWZ4 1543 aa16.15■□□□□ 0.18
RPL3P3-201ENST00000467870 EHMT2Q96KQ7 1210 aa16.15■□□□□ 0.18
RPL3P3-201ENST00000467870 UBTFP17480 764 aaKnown RBP16.14■□□□□ 0.17
RPL3P3-201ENST00000467870 TDRD9Q8NDG6 1382 aaKnown RBP16.13■□□□□ 0.17
RPL3P3-201ENST00000467870 SENP3Q9H4L4 574 aaPredicted RBP16.1■□□□□ 0.17
RPL3P3-201ENST00000467870 IGF1RP08069 1367 aa16.1■□□□□ 0.17
RPL3P3-201ENST00000467870 CHMP7Q8WUX9 453 aaPredicted RBP16.07■□□□□ 0.16
RPL3P3-201ENST00000467870 GAPVD1Q14C86 1478 aa16.07■□□□□ 0.16
RPL3P3-201ENST00000467870 SNAPC4Q5SXM2 1469 aa16.07■□□□□ 0.16
RPL3P3-201ENST00000467870 CARMIL1Q5VZK9 1371 aa16.05■□□□□ 0.16
RPL3P3-201ENST00000467870 GOLGA3Q08378 1498 aa16.03■□□□□ 0.16
RPL3P3-201ENST00000467870 CLASP1Q7Z460 1538 aa16.02■□□□□ 0.15
RPL3P3-201ENST00000467870 WDR97A6NE52 1622 aa16■□□□□ 0.15
RPL3P3-201ENST00000467870 GRIN2BQ13224 1484 aa15.99■□□□□ 0.15
RPL3P3-201ENST00000467870 PRXQ9BXM0 1461 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 6.1 ms