RNA–Protein interactions for RNA: ENST00000467869.5

ELL3-203, Transcript of elongation factor for RNA polymerase II 3, humanhuman

TSL 2

Gene ELL3, Length 1,769 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3-203ENST00000467869 NISCHQ9Y2I1 1504 aa37.78■■■■□ 3.64
ELL3-203ENST00000467869 CCDC180Q9P1Z9 1646 aa33.19■■■□□ 2.9
ELL3-203ENST00000467869 ZCCHC6Q5VYS8 1495 aaKnown RBP31.67■■■□□ 2.66
ELL3-203ENST00000467869 ABCC9O60706 1549 aa31.66■■■□□ 2.66
ELL3-203ENST00000467869 DCAF8L2P0C7V8 631 aa31.3■■■□□ 2.6
ELL3-203ENST00000467869 DCAF1Q9Y4B6 1507 aa31.26■■■□□ 2.6
ELL3-203ENST00000467869 MYO15BQ96JP2 1530 aa31.05■■■□□ 2.56
ELL3-203ENST00000467869 NACADO15069 1562 aa30.99■■■□□ 2.55
ELL3-203ENST00000467869 RB1CC1Q8TDY2 1594 aa30.82■■■□□ 2.52
ELL3-203ENST00000467869 SHROOM4Q9ULL8 1493 aa30.51■■■□□ 2.47
ELL3-203ENST00000467869 SCRIBQ14160 1630 aa30.43■■■□□ 2.46
ELL3-203ENST00000467869 UNC13AQ9UPW8 1703 aa30.12■■■□□ 2.41
ELL3-203ENST00000467869 BICRAQ9NZM4 1560 aa29.81■■■□□ 2.36
ELL3-203ENST00000467869 PABPN1Q86U42 306 aaKnown RBP eCLIP29.74■■■□□ 2.35
ELL3-203ENST00000467869 CECR2Q9BXF3 1484 aa29.34■■■□□ 2.29
ELL3-203ENST00000467869 BAZ1AQ9NRL2 1556 aaPredicted RBP29.24■■■□□ 2.27
ELL3-203ENST00000467869 SUPT5HO00267 1087 aaKnown RBP29.17■■■□□ 2.26
ELL3-203ENST00000467869 MROH2BQ7Z745 1585 aa29.14■■■□□ 2.26
ELL3-203ENST00000467869 SMARCA4P51532 1647 aa29.14■■■□□ 2.26
ELL3-203ENST00000467869 RSF1Q96T23 1441 aaPredicted RBP29.13■■■□□ 2.25
ELL3-203ENST00000467869 EIF4G1Q04637 1599 aaKnown RBP28.99■■■□□ 2.23
ELL3-203ENST00000467869 WIZO95785 1651 aa28.9■■■□□ 2.22
ELL3-203ENST00000467869 PEG3Q9GZU2 1588 aa28.8■■■□□ 2.2
ELL3-203ENST00000467869 SMARCA2P51531 1590 aa28.77■■■□□ 2.2
ELL3-203ENST00000467869 ATAD2BQ9ULI0 1458 aa28.74■■■□□ 2.19
ELL3-203ENST00000467869 CC2D2AQ9P2K1 1620 aa28.65■■■□□ 2.18
ELL3-203ENST00000467869 TOP2AP11388 1531 aaKnown RBP28.64■■■□□ 2.18
ELL3-203ENST00000467869 BAZ1BQ9UIG0 1483 aaKnown RBP28.59■■■□□ 2.17
ELL3-203ENST00000467869 NCAPD3P42695 1498 aa28.56■■■□□ 2.16
ELL3-203ENST00000467869 HMGXB3Q12766 1538 aa28.53■■■□□ 2.16
ELL3-203ENST00000467869 CCDC88BA6NC98 1476 aa28.29■■■□□ 2.12
ELL3-203ENST00000467869 DNAJC5BQ9UF47 199 aa28.16■■■□□ 2.1
ELL3-203ENST00000467869 CFTRP13569 1480 aa27.82■■■□□ 2.04
ELL3-203ENST00000467869 CADPSQ9ULU8 1353 aa27.8■■■□□ 2.04
ELL3-203ENST00000467869 PRDM2Q13029 1718 aa27.71■■■□□ 2.03
ELL3-203ENST00000467869 CHIC1Q5VXU3 224 aa27.7■■■□□ 2.02
ELL3-203ENST00000467869 LAMC3Q9Y6N6 1575 aa27.69■■■□□ 2.02
ELL3-203ENST00000467869 NESP48681 1621 aa27.64■■■□□ 2.02
ELL3-203ENST00000467869 ABCC8Q09428 1581 aa27.57■■■□□ 2
ELL3-203ENST00000467869 FANCD2Q9BXW9 1451 aa27.51■■□□□ 1.99
ELL3-203ENST00000467869 PDS5BQ9NTI5 1447 aa27.49■■□□□ 1.99
ELL3-203ENST00000467869 TRIM41Q8WV44 630 aa27.48■■□□□ 1.99
ELL3-203ENST00000467869 WRNQ14191 1432 aaPredicted RBP eCLIP27.48■■□□□ 1.99
ELL3-203ENST00000467869 CEP164Q9UPV0 1460 aa27.4■■□□□ 1.98
ELL3-203ENST00000467869 KIF21AQ7Z4S6 1674 aa27.36■■□□□ 1.97
ELL3-203ENST00000467869 SYNJ1O43426 1573 aa27.35■■□□□ 1.97
ELL3-203ENST00000467869 TOP2BQ02880 1626 aa27.3■■□□□ 1.96
ELL3-203ENST00000467869 CUX1P39880 1505 aa27.3■■□□□ 1.96
ELL3-203ENST00000467869 BIVM-ERCC5R4GMW8 1640 aa27.28■■□□□ 1.96
ELL3-203ENST00000467869 ERCC6Q03468 1493 aa27.25■■□□□ 1.95
ELL3-203ENST00000467869 DNMBPQ6XZF7 1577 aa27.22■■□□□ 1.95
ELL3-203ENST00000467869 MRC2Q9UBG0 1479 aa27.16■■□□□ 1.94
ELL3-203ENST00000467869 URB2Q14146 1524 aaKnown RBP27.16■■□□□ 1.94
ELL3-203ENST00000467869 TOPBP1Q92547 1522 aa27.16■■□□□ 1.94
ELL3-203ENST00000467869 HRCP23327 699 aa27.11■■□□□ 1.93
ELL3-203ENST00000467869 FGD5Q6ZNL6 1462 aa27.08■■□□□ 1.93
ELL3-203ENST00000467869 WDR62O43379 1518 aa27.02■■□□□ 1.92
ELL3-203ENST00000467869 THOC2Q8NI27 1593 aaKnown RBP27.02■■□□□ 1.92
ELL3-203ENST00000467869 POLA1P09884 1462 aaPredicted RBP27■■□□□ 1.91
ELL3-203ENST00000467869 SOGA1O94964 1423 aa26.95■■□□□ 1.91
ELL3-203ENST00000467869 FAM9AQ8IZU1 332 aaPredicted RBP26.94■■□□□ 1.9
ELL3-203ENST00000467869 EEA1Q15075 1411 aa26.92■■□□□ 1.9
ELL3-203ENST00000467869 RAD54L2Q9Y4B4 1467 aa26.88■■□□□ 1.89
ELL3-203ENST00000467869 RUSC2Q8N2Y8 1516 aa26.84■■□□□ 1.89
ELL3-203ENST00000467869 CUX2O14529 1486 aa26.84■■□□□ 1.89
ELL3-203ENST00000467869 ABCA10Q8WWZ4 1543 aa26.83■■□□□ 1.89
ELL3-203ENST00000467869 KIF27Q86VH2 1401 aa26.83■■□□□ 1.89
ELL3-203ENST00000467869 WDR97A6NE52 1622 aa26.79■■□□□ 1.88
ELL3-203ENST00000467869 IFT140Q96RY7 1462 aa26.77■■□□□ 1.88
ELL3-203ENST00000467869 TARBP1Q13395 1621 aaKnown RBP26.77■■□□□ 1.88
ELL3-203ENST00000467869 CSRNP3Q8WYN3 585 aa26.74■■□□□ 1.87
ELL3-203ENST00000467869 ABCA5Q8WWZ7 1642 aa26.65■■□□□ 1.86
ELL3-203ENST00000467869 TDRD9Q8NDG6 1382 aaKnown RBP26.65■■□□□ 1.86
ELL3-203ENST00000467869 GAPVD1Q14C86 1478 aa26.61■■□□□ 1.85
ELL3-203ENST00000467869 LOC105371045A0A1W2PR82 267 aa26.58■■□□□ 1.85
ELL3-203ENST00000467869 KIF21BO75037 1637 aa26.57■■□□□ 1.84
ELL3-203ENST00000467869 IGF1RP08069 1367 aa26.57■■□□□ 1.84
ELL3-203ENST00000467869 ZNF608Q9ULD9 1512 aaPredicted RBP26.57■■□□□ 1.84
ELL3-203ENST00000467869 EHMT2Q96KQ7 1210 aa26.56■■□□□ 1.84
ELL3-203ENST00000467869 AQRO60306 1485 aaKnown RBP eCLIP26.54■■□□□ 1.84
ELL3-203ENST00000467869 ERICH3Q5RHP9 1530 aa26.53■■□□□ 1.84
ELL3-203ENST00000467869 EIF4G3O43432 1585 aaKnown RBP26.53■■□□□ 1.84
ELL3-203ENST00000467869 GOLGA3Q08378 1498 aa26.52■■□□□ 1.84
ELL3-203ENST00000467869 PBRM1Q86U86 1689 aa26.52■■□□□ 1.84
ELL3-203ENST00000467869 PRXQ9BXM0 1461 aa26.51■■□□□ 1.83
ELL3-203ENST00000467869 CUL7Q14999 1698 aa26.49■■□□□ 1.83
ELL3-203ENST00000467869 GRIN2BQ13224 1484 aa26.48■■□□□ 1.83
ELL3-203ENST00000467869 CARMIL1Q5VZK9 1371 aa26.46■■□□□ 1.83
ELL3-203ENST00000467869 RAPGEF2Q9Y4G8 1499 aa26.44■■□□□ 1.82
ELL3-203ENST00000467869 PELP1Q8IZL8 1130 aaKnown RBP26.41■■□□□ 1.82
ELL3-203ENST00000467869 UBTFP17480 764 aaKnown RBP26.39■■□□□ 1.82
ELL3-203ENST00000467869 ADAMTS12P58397 1594 aa26.35■■□□□ 1.81
ELL3-203ENST00000467869 SNAPC4Q5SXM2 1469 aa26.34■■□□□ 1.81
ELL3-203ENST00000467869 FHAD1B1AJZ9 1412 aa26.33■■□□□ 1.81
ELL3-203ENST00000467869 TNIKQ9UKE5 1360 aa26.32■■□□□ 1.8
ELL3-203ENST00000467869 MAGI1Q96QZ7 1491 aaPredicted RBP26.31■■□□□ 1.8
ELL3-203ENST00000467869 PCGF6Q9BYE7 350 aa26.23■■□□□ 1.79
ELL3-203ENST00000467869 SYNJ2O15056 1496 aa26.2■■□□□ 1.79
ELL3-203ENST00000467869 CEP162Q5TB80 1403 aa26.16■■□□□ 1.78
ELL3-203ENST00000467869 CHMP7Q8WUX9 453 aaPredicted RBP26.15■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms