RNA–Protein interactions for RNA: ENST00000467753.1

SOGA3-202, Transcript of SOGA family member 3, humanhuman

TSL 3

Gene SOGA3, Length 709 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOGA3-202ENST00000467753 NISCHQ9Y2I1 1504 aa24.36■■□□□ 1.49
SOGA3-202ENST00000467753 CCDC180Q9P1Z9 1646 aa21.33■■□□□ 1
SOGA3-202ENST00000467753 ZCCHC6Q5VYS8 1495 aaKnown RBP20.43■□□□□ 0.86
SOGA3-202ENST00000467753 ABCC9O60706 1549 aa20.28■□□□□ 0.84
SOGA3-202ENST00000467753 DCAF1Q9Y4B6 1507 aa20.15■□□□□ 0.82
SOGA3-202ENST00000467753 DCAF8L2P0C7V8 631 aa20.08■□□□□ 0.81
SOGA3-202ENST00000467753 MYO15BQ96JP2 1530 aa19.97■□□□□ 0.79
SOGA3-202ENST00000467753 NACADO15069 1562 aa19.89■□□□□ 0.77
SOGA3-202ENST00000467753 RB1CC1Q8TDY2 1594 aa19.74■□□□□ 0.75
SOGA3-202ENST00000467753 SHROOM4Q9ULL8 1493 aa19.73■□□□□ 0.75
SOGA3-202ENST00000467753 SCRIBQ14160 1630 aa19.57■□□□□ 0.72
SOGA3-202ENST00000467753 UNC13AQ9UPW8 1703 aa19.37■□□□□ 0.69
SOGA3-202ENST00000467753 BICRAQ9NZM4 1560 aa19.19■□□□□ 0.66
SOGA3-202ENST00000467753 AEBP2Q6ZN18 517 aaPredicted RBP19.14■□□□□ 0.65
SOGA3-202ENST00000467753 PABPN1Q86U42 306 aaKnown RBP eCLIP19.08■□□□□ 0.64
SOGA3-202ENST00000467753 CECR2Q9BXF3 1484 aa18.95■□□□□ 0.62
SOGA3-202ENST00000467753 SUPT5HO00267 1087 aaKnown RBP18.87■□□□□ 0.61
SOGA3-202ENST00000467753 RSF1Q96T23 1441 aaPredicted RBP18.83■□□□□ 0.61
SOGA3-202ENST00000467753 MROH2BQ7Z745 1585 aa18.81■□□□□ 0.6
SOGA3-202ENST00000467753 BAZ1AQ9NRL2 1556 aaPredicted RBP18.81■□□□□ 0.6
SOGA3-202ENST00000467753 SMARCA4P51532 1647 aa18.76■□□□□ 0.59
SOGA3-202ENST00000467753 WIZO95785 1651 aa18.65■□□□□ 0.58
SOGA3-202ENST00000467753 EIF4G1Q04637 1599 aaKnown RBP18.59■□□□□ 0.57
SOGA3-202ENST00000467753 PEG3Q9GZU2 1588 aa18.55■□□□□ 0.56
SOGA3-202ENST00000467753 ATAD2BQ9ULI0 1458 aa18.49■□□□□ 0.55
SOGA3-202ENST00000467753 SMARCA2P51531 1590 aa18.47■□□□□ 0.55
SOGA3-202ENST00000467753 TOP2AP11388 1531 aaKnown RBP18.46■□□□□ 0.55
SOGA3-202ENST00000467753 CHIC1Q5VXU3 224 aa18.39■□□□□ 0.53
SOGA3-202ENST00000467753 NCAPD3P42695 1498 aa18.36■□□□□ 0.53
SOGA3-202ENST00000467753 CC2D2AQ9P2K1 1620 aa18.36■□□□□ 0.53
SOGA3-202ENST00000467753 BAZ1BQ9UIG0 1483 aaKnown RBP18.36■□□□□ 0.53
SOGA3-202ENST00000467753 HMGXB3Q12766 1538 aa18.33■□□□□ 0.52
SOGA3-202ENST00000467753 CCDC88BA6NC98 1476 aa18.26■□□□□ 0.51
SOGA3-202ENST00000467753 DNAJC5BQ9UF47 199 aa18.08■□□□□ 0.48
SOGA3-202ENST00000467753 CFTRP13569 1480 aa17.9■□□□□ 0.46
SOGA3-202ENST00000467753 CADPSQ9ULU8 1353 aa17.86■□□□□ 0.45
SOGA3-202ENST00000467753 ABCC8Q09428 1581 aa17.82■□□□□ 0.44
SOGA3-202ENST00000467753 PRDM2Q13029 1718 aa17.81■□□□□ 0.44
SOGA3-202ENST00000467753 NESP48681 1621 aa17.76■□□□□ 0.43
SOGA3-202ENST00000467753 TRIM41Q8WV44 630 aa17.76■□□□□ 0.43
SOGA3-202ENST00000467753 LAMC3Q9Y6N6 1575 aa17.75■□□□□ 0.43
SOGA3-202ENST00000467753 WRNQ14191 1432 aaPredicted RBP eCLIP17.72■□□□□ 0.43
SOGA3-202ENST00000467753 SYNJ1O43426 1573 aa17.67■□□□□ 0.42
SOGA3-202ENST00000467753 FANCD2Q9BXW9 1451 aa17.67■□□□□ 0.42
SOGA3-202ENST00000467753 CUX1P39880 1505 aa17.61■□□□□ 0.41
SOGA3-202ENST00000467753 TOP2BQ02880 1626 aa17.61■□□□□ 0.41
SOGA3-202ENST00000467753 PDS5BQ9NTI5 1447 aa17.6■□□□□ 0.41
SOGA3-202ENST00000467753 BIVM-ERCC5R4GMW8 1640 aa17.6■□□□□ 0.41
SOGA3-202ENST00000467753 CEP164Q9UPV0 1460 aa17.57■□□□□ 0.4
SOGA3-202ENST00000467753 KIF21AQ7Z4S6 1674 aa17.55■□□□□ 0.4
SOGA3-202ENST00000467753 DNAJC5Q9H3Z4 198 aa17.51■□□□□ 0.39
SOGA3-202ENST00000467753 DNMBPQ6XZF7 1577 aa17.49■□□□□ 0.39
SOGA3-202ENST00000467753 URB2Q14146 1524 aaKnown RBP17.47■□□□□ 0.39
SOGA3-202ENST00000467753 TOPBP1Q92547 1522 aa17.47■□□□□ 0.39
SOGA3-202ENST00000467753 SOGA1O94964 1423 aa17.45■□□□□ 0.38
SOGA3-202ENST00000467753 FAM9AQ8IZU1 332 aaPredicted RBP17.43■□□□□ 0.38
SOGA3-202ENST00000467753 FGD5Q6ZNL6 1462 aa17.43■□□□□ 0.38
SOGA3-202ENST00000467753 MRC2Q9UBG0 1479 aa17.41■□□□□ 0.38
SOGA3-202ENST00000467753 RUSC2Q8N2Y8 1516 aa17.41■□□□□ 0.38
SOGA3-202ENST00000467753 ERCC6Q03468 1493 aa17.38■□□□□ 0.37
SOGA3-202ENST00000467753 EEA1Q15075 1411 aa17.38■□□□□ 0.37
SOGA3-202ENST00000467753 POLA1P09884 1462 aaPredicted RBP17.37■□□□□ 0.37
SOGA3-202ENST00000467753 WDR62O43379 1518 aa17.33■□□□□ 0.37
SOGA3-202ENST00000467753 THOC2Q8NI27 1593 aaKnown RBP17.32■□□□□ 0.36
SOGA3-202ENST00000467753 RAD54L2Q9Y4B4 1467 aa17.31■□□□□ 0.36
SOGA3-202ENST00000467753 LOC105371045A0A1W2PR82 267 aa17.31■□□□□ 0.36
SOGA3-202ENST00000467753 CSRNP3Q8WYN3 585 aa17.29■□□□□ 0.36
SOGA3-202ENST00000467753 CUX2O14529 1486 aa17.28■□□□□ 0.36
SOGA3-202ENST00000467753 KIF27Q86VH2 1401 aa17.28■□□□□ 0.36
SOGA3-202ENST00000467753 ABCA10Q8WWZ4 1543 aa17.27■□□□□ 0.36
SOGA3-202ENST00000467753 WDR97A6NE52 1622 aa17.25■□□□□ 0.35
SOGA3-202ENST00000467753 TARBP1Q13395 1621 aaKnown RBP17.23■□□□□ 0.35
SOGA3-202ENST00000467753 KIF21BO75037 1637 aa17.18■□□□□ 0.34
SOGA3-202ENST00000467753 EHMT2Q96KQ7 1210 aa17.17■□□□□ 0.34
SOGA3-202ENST00000467753 IFT140Q96RY7 1462 aa17.17■□□□□ 0.34
SOGA3-202ENST00000467753 ABCA5Q8WWZ7 1642 aa17.16■□□□□ 0.34
SOGA3-202ENST00000467753 IGF1RP08069 1367 aa17.15■□□□□ 0.34
SOGA3-202ENST00000467753 PRXQ9BXM0 1461 aa17.14■□□□□ 0.33
SOGA3-202ENST00000467753 TDRD9Q8NDG6 1382 aaKnown RBP17.14■□□□□ 0.33
SOGA3-202ENST00000467753 GOLGA3Q08378 1498 aa17.13■□□□□ 0.33
SOGA3-202ENST00000467753 GAPVD1Q14C86 1478 aa17.11■□□□□ 0.33
SOGA3-202ENST00000467753 RAPGEF2Q9Y4G8 1499 aa17.11■□□□□ 0.33
SOGA3-202ENST00000467753 ERICH3Q5RHP9 1530 aa17.09■□□□□ 0.33
SOGA3-202ENST00000467753 ZNF608Q9ULD9 1512 aaPredicted RBP17.08■□□□□ 0.32
SOGA3-202ENST00000467753 AQRO60306 1485 aaKnown RBP eCLIP17.06■□□□□ 0.32
SOGA3-202ENST00000467753 CARMIL1Q5VZK9 1371 aa17.05■□□□□ 0.32
SOGA3-202ENST00000467753 TNIKQ9UKE5 1360 aa17.05■□□□□ 0.32
SOGA3-202ENST00000467753 CUL7Q14999 1698 aa17.04■□□□□ 0.32
SOGA3-202ENST00000467753 PBRM1Q86U86 1689 aa17.04■□□□□ 0.32
SOGA3-202ENST00000467753 EIF4G3O43432 1585 aaKnown RBP17.02■□□□□ 0.32
SOGA3-202ENST00000467753 UBTFP17480 764 aaKnown RBP17.02■□□□□ 0.32
SOGA3-202ENST00000467753 GRIN2BQ13224 1484 aa17■□□□□ 0.31
SOGA3-202ENST00000467753 CEP162Q5TB80 1403 aa16.95■□□□□ 0.3
SOGA3-202ENST00000467753 ADAMTS12P58397 1594 aa16.94■□□□□ 0.3
SOGA3-202ENST00000467753 FHAD1B1AJZ9 1412 aa16.92■□□□□ 0.3
SOGA3-202ENST00000467753 SNAPC4Q5SXM2 1469 aa16.91■□□□□ 0.3
SOGA3-202ENST00000467753 MAGI1Q96QZ7 1491 aaPredicted RBP16.87■□□□□ 0.29
SOGA3-202ENST00000467753 CLIP1P30622 1438 aa16.85■□□□□ 0.29
SOGA3-202ENST00000467753 CTTNBP2Q8WZ74 1663 aa16.83■□□□□ 0.28
SOGA3-202ENST00000467753 SYNJ2O15056 1496 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms