RNA–Protein interactions for RNA: ENST00000467724.5

AGAP3-207, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, humanhuman

TSL 5

Gene AGAP3, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP3-207ENST00000467724 NISCHQ9Y2I1 1504 aa42.25■■■■■ 4.35
AGAP3-207ENST00000467724 CCDC180Q9P1Z9 1646 aa36.96■■■■□ 3.51
AGAP3-207ENST00000467724 ZCCHC6Q5VYS8 1495 aaKnown RBP35.51■■■■□ 3.28
AGAP3-207ENST00000467724 DCAF1Q9Y4B6 1507 aa35.16■■■■□ 3.22
AGAP3-207ENST00000467724 MYO15BQ96JP2 1530 aa34.78■■■■□ 3.16
AGAP3-207ENST00000467724 DCAF8L2P0C7V8 631 aa34.67■■■■□ 3.14
AGAP3-207ENST00000467724 ABCC9O60706 1549 aa34.58■■■■□ 3.13
AGAP3-207ENST00000467724 NACADO15069 1562 aa34.44■■■■□ 3.1
AGAP3-207ENST00000467724 SHROOM4Q9ULL8 1493 aa34.16■■■■□ 3.06
AGAP3-207ENST00000467724 RB1CC1Q8TDY2 1594 aa34.08■■■■□ 3.05
AGAP3-207ENST00000467724 SCRIBQ14160 1630 aa33.69■■■□□ 2.98
AGAP3-207ENST00000467724 UNC13AQ9UPW8 1703 aa33.08■■■□□ 2.89
AGAP3-207ENST00000467724 SUPT5HO00267 1087 aaKnown RBP33.02■■■□□ 2.88
AGAP3-207ENST00000467724 BICRAQ9NZM4 1560 aa32.82■■■□□ 2.84
AGAP3-207ENST00000467724 RSF1Q96T23 1441 aaPredicted RBP32.74■■■□□ 2.83
AGAP3-207ENST00000467724 BAZ1AQ9NRL2 1556 aaPredicted RBP32.72■■■□□ 2.83
AGAP3-207ENST00000467724 CECR2Q9BXF3 1484 aa32.61■■■□□ 2.81
AGAP3-207ENST00000467724 PABPN1Q86U42 306 aaKnown RBP eCLIP32.54■■■□□ 2.8
AGAP3-207ENST00000467724 MROH2BQ7Z745 1585 aa32.5■■■□□ 2.79
AGAP3-207ENST00000467724 SMARCA4P51532 1647 aa32.44■■■□□ 2.78
AGAP3-207ENST00000467724 WIZO95785 1651 aa32.19■■■□□ 2.74
AGAP3-207ENST00000467724 PEG3Q9GZU2 1588 aa32.17■■■□□ 2.74
AGAP3-207ENST00000467724 TOP2AP11388 1531 aaKnown RBP32.08■■■□□ 2.73
AGAP3-207ENST00000467724 SMARCA2P51531 1590 aa32.04■■■□□ 2.72
AGAP3-207ENST00000467724 ATAD2BQ9ULI0 1458 aa31.91■■■□□ 2.7
AGAP3-207ENST00000467724 EIF4G1Q04637 1599 aaKnown RBP31.9■■■□□ 2.7
AGAP3-207ENST00000467724 BAZ1BQ9UIG0 1483 aaKnown RBP31.78■■■□□ 2.68
AGAP3-207ENST00000467724 CHIC1Q5VXU3 224 aa31.74■■■□□ 2.67
AGAP3-207ENST00000467724 NCAPD3P42695 1498 aa31.73■■■□□ 2.67
AGAP3-207ENST00000467724 HMGXB3Q12766 1538 aa31.71■■■□□ 2.67
AGAP3-207ENST00000467724 CCDC88BA6NC98 1476 aa31.65■■■□□ 2.66
AGAP3-207ENST00000467724 CC2D2AQ9P2K1 1620 aa31.36■■■□□ 2.61
AGAP3-207ENST00000467724 TRIM41Q8WV44 630 aa31.25■■■□□ 2.59
AGAP3-207ENST00000467724 CFTRP13569 1480 aa30.99■■■□□ 2.55
AGAP3-207ENST00000467724 WRNQ14191 1432 aaPredicted RBP eCLIP30.9■■■□□ 2.54
AGAP3-207ENST00000467724 CADPSQ9ULU8 1353 aa30.89■■■□□ 2.54
AGAP3-207ENST00000467724 ABCC8Q09428 1581 aa30.84■■■□□ 2.53
AGAP3-207ENST00000467724 PRDM2Q13029 1718 aa30.83■■■□□ 2.53
AGAP3-207ENST00000467724 EEA1Q15075 1411 aa30.73■■■□□ 2.51
AGAP3-207ENST00000467724 LAMC3Q9Y6N6 1575 aa30.66■■■□□ 2.5
AGAP3-207ENST00000467724 TOP2BQ02880 1626 aa30.63■■■□□ 2.49
AGAP3-207ENST00000467724 BIVM-ERCC5R4GMW8 1640 aa30.59■■■□□ 2.49
AGAP3-207ENST00000467724 SYNJ1O43426 1573 aa30.59■■■□□ 2.49
AGAP3-207ENST00000467724 FANCD2Q9BXW9 1451 aa30.49■■■□□ 2.47
AGAP3-207ENST00000467724 PDS5BQ9NTI5 1447 aa30.46■■■□□ 2.47
AGAP3-207ENST00000467724 CUX1P39880 1505 aa30.42■■■□□ 2.46
AGAP3-207ENST00000467724 FAM9AQ8IZU1 332 aaPredicted RBP30.4■■■□□ 2.46
AGAP3-207ENST00000467724 CEP164Q9UPV0 1460 aa30.34■■■□□ 2.45
AGAP3-207ENST00000467724 SOGA1O94964 1423 aa30.33■■■□□ 2.45
AGAP3-207ENST00000467724 LOC105371045A0A1W2PR82 267 aa30.33■■■□□ 2.45
AGAP3-207ENST00000467724 CSRNP3Q8WYN3 585 aa30.33■■■□□ 2.45
AGAP3-207ENST00000467724 NESP48681 1621 aa30.3■■■□□ 2.44
AGAP3-207ENST00000467724 DNMBPQ6XZF7 1577 aa30.28■■■□□ 2.44
AGAP3-207ENST00000467724 DNAJC5BQ9UF47 199 aa30.25■■■□□ 2.43
AGAP3-207ENST00000467724 KIF27Q86VH2 1401 aa30.2■■■□□ 2.42
AGAP3-207ENST00000467724 TOPBP1Q92547 1522 aa30.14■■■□□ 2.42
AGAP3-207ENST00000467724 KIF21BO75037 1637 aa30.13■■■□□ 2.41
AGAP3-207ENST00000467724 FGD5Q6ZNL6 1462 aa30.12■■■□□ 2.41
AGAP3-207ENST00000467724 GOLGA3Q08378 1498 aa30.12■■■□□ 2.41
AGAP3-207ENST00000467724 RUSC2Q8N2Y8 1516 aa30.12■■■□□ 2.41
AGAP3-207ENST00000467724 TNIKQ9UKE5 1360 aa30.04■■■□□ 2.4
AGAP3-207ENST00000467724 URB2Q14146 1524 aaKnown RBP30.01■■■□□ 2.39
AGAP3-207ENST00000467724 KIF21AQ7Z4S6 1674 aa30.01■■■□□ 2.39
AGAP3-207ENST00000467724 ERICH3Q5RHP9 1530 aa29.98■■■□□ 2.39
AGAP3-207ENST00000467724 POLA1P09884 1462 aaPredicted RBP29.98■■■□□ 2.39
AGAP3-207ENST00000467724 MRC2Q9UBG0 1479 aa29.97■■■□□ 2.39
AGAP3-207ENST00000467724 ABCA10Q8WWZ4 1543 aa29.96■■■□□ 2.39
AGAP3-207ENST00000467724 CUX2O14529 1486 aa29.96■■■□□ 2.39
AGAP3-207ENST00000467724 PRXQ9BXM0 1461 aa29.92■■■□□ 2.38
AGAP3-207ENST00000467724 UBTFP17480 764 aaKnown RBP29.89■■■□□ 2.38
AGAP3-207ENST00000467724 ERCC6Q03468 1493 aa29.81■■■□□ 2.36
AGAP3-207ENST00000467724 IGF1RP08069 1367 aa29.79■■■□□ 2.36
AGAP3-207ENST00000467724 WDR62O43379 1518 aa29.79■■■□□ 2.36
AGAP3-207ENST00000467724 CEP162Q5TB80 1403 aa29.78■■■□□ 2.36
AGAP3-207ENST00000467724 EHMT2Q96KQ7 1210 aa29.77■■■□□ 2.36
AGAP3-207ENST00000467724 RAD54L2Q9Y4B4 1467 aa29.76■■■□□ 2.35
AGAP3-207ENST00000467724 RAPGEF2Q9Y4G8 1499 aa29.76■■■□□ 2.35
AGAP3-207ENST00000467724 WDR97A6NE52 1622 aa29.74■■■□□ 2.35
AGAP3-207ENST00000467724 CARMIL1Q5VZK9 1371 aa29.69■■■□□ 2.34
AGAP3-207ENST00000467724 CUL7Q14999 1698 aa29.69■■■□□ 2.34
AGAP3-207ENST00000467724 IFT140Q96RY7 1462 aa29.68■■■□□ 2.34
AGAP3-207ENST00000467724 TARBP1Q13395 1621 aaKnown RBP29.66■■■□□ 2.34
AGAP3-207ENST00000467724 ABCA5Q8WWZ7 1642 aa29.64■■■□□ 2.34
AGAP3-207ENST00000467724 GAPVD1Q14C86 1478 aa29.62■■■□□ 2.33
AGAP3-207ENST00000467724 CLIP1P30622 1438 aa29.58■■■□□ 2.33
AGAP3-207ENST00000467724 THOC2Q8NI27 1593 aaKnown RBP29.58■■■□□ 2.33
AGAP3-207ENST00000467724 TDRD9Q8NDG6 1382 aaKnown RBP29.52■■■□□ 2.32
AGAP3-207ENST00000467724 GRIN2BQ13224 1484 aa29.44■■■□□ 2.3
AGAP3-207ENST00000467724 FHAD1B1AJZ9 1412 aa29.37■■■□□ 2.29
AGAP3-207ENST00000467724 PBRM1Q86U86 1689 aa29.37■■■□□ 2.29
AGAP3-207ENST00000467724 VPS8Q8N3P4 1428 aa29.37■■■□□ 2.29
AGAP3-207ENST00000467724 TRIM26Q12899 539 aaPredicted RBP29.36■■■□□ 2.29
AGAP3-207ENST00000467724 AQRO60306 1485 aaKnown RBP eCLIP29.29■■■□□ 2.284e-7■■■■□ 26.7
AGAP3-207ENST00000467724 ADAMTS12P58397 1594 aa29.26■■■□□ 2.27
AGAP3-207ENST00000467724 EFCAB5A4FU69 1503 aa29.25■■■□□ 2.27
AGAP3-207ENST00000467724 CTTNBP2Q8WZ74 1663 aa29.25■■■□□ 2.27
AGAP3-207ENST00000467724 EIF4G3O43432 1585 aaKnown RBP29.23■■■□□ 2.27
AGAP3-207ENST00000467724 MAGI1Q96QZ7 1491 aaPredicted RBP29.23■■■□□ 2.27
AGAP3-207ENST00000467724 ZNF608Q9ULD9 1512 aaPredicted RBP29.22■■■□□ 2.27
AGAP3-207ENST00000467724 APLP2Q06481 763 aa29.22■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms