RNA–Protein interactions for RNA: ENST00000467463.1

PLXNA3-202, Transcript of plexin A3, humanhuman

TSL 3

Gene PLXNA3, Length 384 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNA3-202ENST00000467463 NISCHQ9Y2I1 1504 aa24.31■■□□□ 1.48
PLXNA3-202ENST00000467463 ABCC9O60706 1549 aa21.83■■□□□ 1.09
PLXNA3-202ENST00000467463 CCDC180Q9P1Z9 1646 aa21.59■■□□□ 1.05
PLXNA3-202ENST00000467463 DNAJC5BQ9UF47 199 aa21.04■□□□□ 0.96
PLXNA3-202ENST00000467463 DCAF8L2P0C7V8 631 aa20.48■□□□□ 0.87
PLXNA3-202ENST00000467463 RB1CC1Q8TDY2 1594 aa20.45■□□□□ 0.86
PLXNA3-202ENST00000467463 NACADO15069 1562 aa20.39■□□□□ 0.85
PLXNA3-202ENST00000467463 PABPN1Q86U42 306 aaKnown RBP eCLIP20.23■□□□□ 0.83
PLXNA3-202ENST00000467463 MYO15BQ96JP2 1530 aa20.22■□□□□ 0.83
PLXNA3-202ENST00000467463 ZCCHC6Q5VYS8 1495 aaKnown RBP20.21■□□□□ 0.83
PLXNA3-202ENST00000467463 UNC13AQ9UPW8 1703 aa20.09■□□□□ 0.81
PLXNA3-202ENST00000467463 DCAF1Q9Y4B6 1507 aa20.07■□□□□ 0.8
PLXNA3-202ENST00000467463 BICRAQ9NZM4 1560 aa19.89■□□□□ 0.77
PLXNA3-202ENST00000467463 SCRIBQ14160 1630 aa19.76■□□□□ 0.75
PLXNA3-202ENST00000467463 DNAJC5Q9H3Z4 198 aa19.73■□□□□ 0.75
PLXNA3-202ENST00000467463 CECR2Q9BXF3 1484 aa19.69■□□□□ 0.74
PLXNA3-202ENST00000467463 CC2D2AQ9P2K1 1620 aa19.68■□□□□ 0.74
PLXNA3-202ENST00000467463 SHROOM4Q9ULL8 1493 aa19.58■□□□□ 0.72
PLXNA3-202ENST00000467463 EIF4G1Q04637 1599 aaKnown RBP19.44■□□□□ 0.7
PLXNA3-202ENST00000467463 CUX2O14529 1486 aa18.98■□□□□ 0.63
PLXNA3-202ENST00000467463 SMARCA4P51532 1647 aa18.88■□□□□ 0.61
PLXNA3-202ENST00000467463 ERCC6Q03468 1493 aa18.87■□□□□ 0.61
PLXNA3-202ENST00000467463 NCAPD3P42695 1498 aa18.86■□□□□ 0.61
PLXNA3-202ENST00000467463 ATAD2BQ9ULI0 1458 aa18.85■□□□□ 0.61
PLXNA3-202ENST00000467463 BAZ1AQ9NRL2 1556 aaPredicted RBP18.83■□□□□ 0.6
PLXNA3-202ENST00000467463 SMARCA2P51531 1590 aa18.76■□□□□ 0.59
PLXNA3-202ENST00000467463 MROH2BQ7Z745 1585 aa18.76■□□□□ 0.59
PLXNA3-202ENST00000467463 HMGXB3Q12766 1538 aa18.7■□□□□ 0.58
PLXNA3-202ENST00000467463 TRIM41Q8WV44 630 aa18.7■□□□□ 0.58
PLXNA3-202ENST00000467463 PEG3Q9GZU2 1588 aa18.68■□□□□ 0.58
PLXNA3-202ENST00000467463 BAZ1BQ9UIG0 1483 aaKnown RBP18.66■□□□□ 0.58
PLXNA3-202ENST00000467463 NESP48681 1621 aa18.58■□□□□ 0.56
PLXNA3-202ENST00000467463 WIZO95785 1651 aa18.54■□□□□ 0.56
PLXNA3-202ENST00000467463 RSF1Q96T23 1441 aaPredicted RBP18.5■□□□□ 0.55
PLXNA3-202ENST00000467463 THOC2Q8NI27 1593 aaKnown RBP18.49■□□□□ 0.55
PLXNA3-202ENST00000467463 KIF21AQ7Z4S6 1674 aa18.35■□□□□ 0.53
PLXNA3-202ENST00000467463 LAMC3Q9Y6N6 1575 aa18.34■□□□□ 0.53
PLXNA3-202ENST00000467463 CADPSQ9ULU8 1353 aa18.32■□□□□ 0.52
PLXNA3-202ENST00000467463 TOP2AP11388 1531 aaKnown RBP18.29■□□□□ 0.52
PLXNA3-202ENST00000467463 PDS5BQ9NTI5 1447 aa18.26■□□□□ 0.51
PLXNA3-202ENST00000467463 CFTRP13569 1480 aa18.16■□□□□ 0.5
PLXNA3-202ENST00000467463 CCDC88BA6NC98 1476 aa18.14■□□□□ 0.49
PLXNA3-202ENST00000467463 FANCD2Q9BXW9 1451 aa18.09■□□□□ 0.49
PLXNA3-202ENST00000467463 MRC2Q9UBG0 1479 aa18.08■□□□□ 0.49
PLXNA3-202ENST00000467463 CEP164Q9UPV0 1460 aa18.06■□□□□ 0.48
PLXNA3-202ENST00000467463 WDR62O43379 1518 aa18.05■□□□□ 0.48
PLXNA3-202ENST00000467463 OSCARQ8IYS5 282 aa18.04■□□□□ 0.48
PLXNA3-202ENST00000467463 SUPT5HO00267 1087 aaKnown RBP17.97■□□□□ 0.47
PLXNA3-202ENST00000467463 RIMBP3CA6NJZ7 1639 aa17.94■□□□□ 0.46
PLXNA3-202ENST00000467463 RIMBP3BA6NNM3 1639 aa17.94■□□□□ 0.46
PLXNA3-202ENST00000467463 RIMBP3Q9UFD9 1639 aa17.94■□□□□ 0.46
PLXNA3-202ENST00000467463 URB2Q14146 1524 aaKnown RBP17.93■□□□□ 0.46
PLXNA3-202ENST00000467463 PRDM2Q13029 1718 aa17.89■□□□□ 0.45
PLXNA3-202ENST00000467463 TOPBP1Q92547 1522 aa17.78■□□□□ 0.44
PLXNA3-202ENST00000467463 ARHGEF11O15085 1522 aa17.77■□□□□ 0.44
PLXNA3-202ENST00000467463 TRHP20396 242 aaPredicted RBP17.75■□□□□ 0.43
PLXNA3-202ENST00000467463 ABCC8Q09428 1581 aa17.74■□□□□ 0.43
PLXNA3-202ENST00000467463 CYB5RLQ6IPT4 315 aa17.72■□□□□ 0.43
PLXNA3-202ENST00000467463 DNMBPQ6XZF7 1577 aa17.71■□□□□ 0.43
PLXNA3-202ENST00000467463 IFT140Q96RY7 1462 aa17.69■□□□□ 0.42
PLXNA3-202ENST00000467463 AEBP2Q6ZN18 517 aaPredicted RBP17.69■□□□□ 0.42
PLXNA3-202ENST00000467463 ZNF608Q9ULD9 1512 aaPredicted RBP17.67■□□□□ 0.42
PLXNA3-202ENST00000467463 POLA1P09884 1462 aaPredicted RBP17.63■□□□□ 0.41
PLXNA3-202ENST00000467463 CUX1P39880 1505 aa17.59■□□□□ 0.41
PLXNA3-202ENST00000467463 RAD54L2Q9Y4B4 1467 aa17.59■□□□□ 0.41
PLXNA3-202ENST00000467463 TARBP1Q13395 1621 aaKnown RBP17.58■□□□□ 0.4
PLXNA3-202ENST00000467463 SOGA1O94964 1423 aa17.57■□□□□ 0.4
PLXNA3-202ENST00000467463 AQRO60306 1485 aaKnown RBP eCLIP17.56■□□□□ 0.45e-7■■■□□ 14.6
PLXNA3-202ENST00000467463 ARAP1Q96P48 1450 aa17.56■□□□□ 0.4
PLXNA3-202ENST00000467463 FGD5Q6ZNL6 1462 aa17.56■□□□□ 0.4
PLXNA3-202ENST00000467463 CHD1O14646 1710 aa17.55■□□□□ 0.4
PLXNA3-202ENST00000467463 EIF4G3O43432 1585 aaKnown RBP17.53■□□□□ 0.4
PLXNA3-202ENST00000467463 TDRD9Q8NDG6 1382 aaKnown RBP17.53■□□□□ 0.4
PLXNA3-202ENST00000467463 FBLN2P98095 1184 aa17.43■□□□□ 0.38
PLXNA3-202ENST00000467463 WRNQ14191 1432 aaPredicted RBP eCLIP17.43■□□□□ 0.38
PLXNA3-202ENST00000467463 SYNJ1O43426 1573 aa17.38■□□□□ 0.37
PLXNA3-202ENST00000467463 WDR97A6NE52 1622 aa17.37■□□□□ 0.37
PLXNA3-202ENST00000467463 TOP2BQ02880 1626 aa17.37■□□□□ 0.37
PLXNA3-202ENST00000467463 ABCA10Q8WWZ4 1543 aa17.37■□□□□ 0.37
PLXNA3-202ENST00000467463 SNAPC4Q5SXM2 1469 aa17.36■□□□□ 0.37
PLXNA3-202ENST00000467463 GRIN2BQ13224 1484 aa17.35■□□□□ 0.37
PLXNA3-202ENST00000467463 BIVM-ERCC5R4GMW8 1640 aa17.35■□□□□ 0.37
PLXNA3-202ENST00000467463 GAPVD1Q14C86 1478 aa17.34■□□□□ 0.37
PLXNA3-202ENST00000467463 CHMP7Q8WUX9 453 aaPredicted RBP17.32■□□□□ 0.36
PLXNA3-202ENST00000467463 MAGI1Q96QZ7 1491 aaPredicted RBP17.31■□□□□ 0.36
PLXNA3-202ENST00000467463 ABCA5Q8WWZ7 1642 aa17.28■□□□□ 0.36
PLXNA3-202ENST00000467463 SYNJ2O15056 1496 aa17.25■□□□□ 0.35
PLXNA3-202ENST00000467463 PBRM1Q86U86 1689 aa17.25■□□□□ 0.35
PLXNA3-202ENST00000467463 CLASP1Q7Z460 1538 aa17.24■□□□□ 0.35
PLXNA3-202ENST00000467463 ERICH3Q5RHP9 1530 aa17.14■□□□□ 0.33
PLXNA3-202ENST00000467463 FHAD1B1AJZ9 1412 aa17.13■□□□□ 0.33
PLXNA3-202ENST00000467463 GRIN2AQ12879 1464 aa17.13■□□□□ 0.33
PLXNA3-202ENST00000467463 ADAMTS12P58397 1594 aa17.13■□□□□ 0.33
PLXNA3-202ENST00000467463 NUP160Q12769 1436 aa17.07■□□□□ 0.32
PLXNA3-202ENST00000467463 KIF27Q86VH2 1401 aa17.07■□□□□ 0.32
PLXNA3-202ENST00000467463 IGF1RP08069 1367 aa17.07■□□□□ 0.32
PLXNA3-202ENST00000467463 CEP170Q5SW79 1584 aa17.05■□□□□ 0.32
PLXNA3-202ENST00000467463 ILDR1Q86SU0 546 aaPredicted RBP17.01■□□□□ 0.31
PLXNA3-202ENST00000467463 ERCC6L2Q5T890 1561 aa16.99■□□□□ 0.31
PLXNA3-202ENST00000467463 KIF13AQ9H1H9 1805 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms