RNA–Protein interactions for RNA: ENST00000467353.1

CPS1-205, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 3

Gene CPS1, Length 323 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-205ENST00000467353 NISCHQ9Y2I1 1504 aa11.09□□□□□ -0.63
CPS1-205ENST00000467353 ABCC9O60706 1549 aa10.61□□□□□ -0.71
CPS1-205ENST00000467353 CHIC1Q5VXU3 224 aa10.53□□□□□ -0.72
CPS1-205ENST00000467353 DNAJC5BQ9UF47 199 aa10.49□□□□□ -0.73
CPS1-205ENST00000467353 AEBP2Q6ZN18 517 aaPredicted RBP10.15□□□□□ -0.78
CPS1-205ENST00000467353 CCDC180Q9P1Z9 1646 aa10□□□□□ -0.81
CPS1-205ENST00000467353 PABPN1Q86U42 306 aaKnown RBP eCLIP9.91□□□□□ -0.82
CPS1-205ENST00000467353 DNAJC5Q9H3Z4 198 aa9.9□□□□□ -0.82
CPS1-205ENST00000467353 RB1CC1Q8TDY2 1594 aa9.8□□□□□ -0.84
CPS1-205ENST00000467353 DCAF8L2P0C7V8 631 aa9.69□□□□□ -0.86
CPS1-205ENST00000467353 NACADO15069 1562 aa9.64□□□□□ -0.87
CPS1-205ENST00000467353 CECR2Q9BXF3 1484 aa9.59□□□□□ -0.87
CPS1-205ENST00000467353 BICRAQ9NZM4 1560 aa9.58□□□□□ -0.88
CPS1-205ENST00000467353 CC2D2AQ9P2K1 1620 aa9.49□□□□□ -0.89
CPS1-205ENST00000467353 UNC13AQ9UPW8 1703 aa9.48□□□□□ -0.89
CPS1-205ENST00000467353 MYO15BQ96JP2 1530 aa9.37□□□□□ -0.91
CPS1-205ENST00000467353 EIF4G1Q04637 1599 aaKnown RBP9.37□□□□□ -0.91
CPS1-205ENST00000467353 SHROOM4Q9ULL8 1493 aa9.34□□□□□ -0.91
CPS1-205ENST00000467353 TRIM41Q8WV44 630 aa9.27□□□□□ -0.93
CPS1-205ENST00000467353 CUX2O14529 1486 aa9.27□□□□□ -0.93
CPS1-205ENST00000467353 SCRIBQ14160 1630 aa9.2□□□□□ -0.94
CPS1-205ENST00000467353 PHF23Q9BUL5 403 aaPredicted RBP9.19□□□□□ -0.94
CPS1-205ENST00000467353 ERCC6Q03468 1493 aa9.15□□□□□ -0.94
CPS1-205ENST00000467353 DCAF1Q9Y4B6 1507 aa9.09□□□□□ -0.95
CPS1-205ENST00000467353 ZCCHC6Q5VYS8 1495 aaKnown RBP9.07□□□□□ -0.96
CPS1-205ENST00000467353 NESP48681 1621 aa9□□□□□ -0.97
CPS1-205ENST00000467353 NCAPD3P42695 1498 aa8.99□□□□□ -0.97
CPS1-205ENST00000467353 ATAD2BQ9ULI0 1458 aa8.89□□□□□ -0.99
CPS1-205ENST00000467353 THOC2Q8NI27 1593 aaKnown RBP8.88□□□□□ -0.99
CPS1-205ENST00000467353 OSCARQ8IYS5 282 aa8.88□□□□□ -0.99
CPS1-205ENST00000467353 PLPPR3Q6T4P5 718 aa8.87□□□□□ -0.99
CPS1-205ENST00000467353 SMARCA2P51531 1590 aa8.83□□□□□ -1
CPS1-205ENST00000467353 PDS5BQ9NTI5 1447 aa8.8□□□□□ -1
CPS1-205ENST00000467353 HMGXB3Q12766 1538 aa8.79□□□□□ -1
CPS1-205ENST00000467353 LAMC3Q9Y6N6 1575 aa8.76□□□□□ -1.01
CPS1-205ENST00000467353 TRHP20396 242 aaPredicted RBP8.75□□□□□ -1.01
CPS1-205ENST00000467353 BAZ1BQ9UIG0 1483 aaKnown RBP8.75□□□□□ -1.01
CPS1-205ENST00000467353 SENP3Q9H4L4 574 aaPredicted RBP8.74□□□□□ -1.01
CPS1-205ENST00000467353 BAZ1AQ9NRL2 1556 aaPredicted RBP8.73□□□□□ -1.01
CPS1-205ENST00000467353 MRC2Q9UBG0 1479 aa8.73□□□□□ -1.01
CPS1-205ENST00000467353 KIF21AQ7Z4S6 1674 aa8.72□□□□□ -1.01
CPS1-205ENST00000467353 CYB5RLQ6IPT4 315 aa8.72□□□□□ -1.01
CPS1-205ENST00000467353 CADPSQ9ULU8 1353 aa8.71□□□□□ -1.02
CPS1-205ENST00000467353 WDR62O43379 1518 aa8.7□□□□□ -1.02
CPS1-205ENST00000467353 RIMBP3CA6NJZ7 1639 aa8.69□□□□□ -1.02
CPS1-205ENST00000467353 RIMBP3BA6NNM3 1639 aa8.69□□□□□ -1.02
CPS1-205ENST00000467353 SMARCA4P51532 1647 aa8.69□□□□□ -1.02
CPS1-205ENST00000467353 RIMBP3Q9UFD9 1639 aa8.69□□□□□ -1.02
CPS1-205ENST00000467353 ARHGEF11O15085 1522 aa8.64□□□□□ -1.03
CPS1-205ENST00000467353 PEG3Q9GZU2 1588 aa8.61□□□□□ -1.03
CPS1-205ENST00000467353 CEP164Q9UPV0 1460 aa8.59□□□□□ -1.03
CPS1-205ENST00000467353 FANCD2Q9BXW9 1451 aa8.57□□□□□ -1.04
CPS1-205ENST00000467353 MROH2BQ7Z745 1585 aa8.56□□□□□ -1.04
CPS1-205ENST00000467353 ARAP1Q96P48 1450 aa8.56□□□□□ -1.04
CPS1-205ENST00000467353 URB2Q14146 1524 aaKnown RBP8.54□□□□□ -1.04
CPS1-205ENST00000467353 ILDR1Q86SU0 546 aaPredicted RBP8.54□□□□□ -1.04
CPS1-205ENST00000467353 ZNF608Q9ULD9 1512 aaPredicted RBP8.53□□□□□ -1.04
CPS1-205ENST00000467353 CFTRP13569 1480 aa8.49□□□□□ -1.05
CPS1-205ENST00000467353 FBLN2P98095 1184 aa8.48□□□□□ -1.05
CPS1-205ENST00000467353 IFT140Q96RY7 1462 aa8.45□□□□□ -1.06
CPS1-205ENST00000467353 RSF1Q96T23 1441 aaPredicted RBP8.45□□□□□ -1.06
CPS1-205ENST00000467353 AQRO60306 1485 aaKnown RBP eCLIP8.42□□□□□ -1.06
CPS1-205ENST00000467353 WIZO95785 1651 aa8.38□□□□□ -1.07
CPS1-205ENST00000467353 TOPBP1Q92547 1522 aa8.35□□□□□ -1.07
CPS1-205ENST00000467353 KDM4FA0A1W2PPD8 638 aa8.35□□□□□ -1.07
CPS1-205ENST00000467353 EIF4G3O43432 1585 aaKnown RBP8.35□□□□□ -1.07
CPS1-205ENST00000467353 CHD1O14646 1710 aa8.33□□□□□ -1.08
CPS1-205ENST00000467353 CHMP7Q8WUX9 453 aaPredicted RBP8.33□□□□□ -1.08
CPS1-205ENST00000467353 TDRD9Q8NDG6 1382 aaKnown RBP8.33□□□□□ -1.08
CPS1-205ENST00000467353 CLASP1Q7Z460 1538 aa8.31□□□□□ -1.08
CPS1-205ENST00000467353 EHMT2Q96KQ7 1210 aa8.31□□□□□ -1.08
CPS1-205ENST00000467353 GAPVD1Q14C86 1478 aa8.3□□□□□ -1.08
CPS1-205ENST00000467353 TARBP1Q13395 1621 aaKnown RBP8.28□□□□□ -1.08
CPS1-205ENST00000467353 ABCC8Q09428 1581 aa8.27□□□□□ -1.09
CPS1-205ENST00000467353 RAD54L2Q9Y4B4 1467 aa8.27□□□□□ -1.09
CPS1-205ENST00000467353 SNAPC4Q5SXM2 1469 aa8.26□□□□□ -1.09
CPS1-205ENST00000467353 SOGA1O94964 1423 aa8.25□□□□□ -1.09
CPS1-205ENST00000467353 CCDC88BA6NC98 1476 aa8.24□□□□□ -1.09
CPS1-205ENST00000467353 POLA1P09884 1462 aaPredicted RBP8.24□□□□□ -1.09
CPS1-205ENST00000467353 TOP2AP11388 1531 aaKnown RBP8.24□□□□□ -1.09
CPS1-205ENST00000467353 DNMBPQ6XZF7 1577 aa8.23□□□□□ -1.09
CPS1-205ENST00000467353 SYNJ1O43426 1573 aa8.22□□□□□ -1.09
CPS1-205ENST00000467353 FAM69CQ0P6D2 419 aa8.21□□□□□ -1.1
CPS1-205ENST00000467353 SYNJ2O15056 1496 aa8.19□□□□□ -1.1
CPS1-205ENST00000467353 MAGI1Q96QZ7 1491 aaPredicted RBP8.19□□□□□ -1.1
CPS1-205ENST00000467353 ERCC6L2Q5T890 1561 aa8.19□□□□□ -1.1
CPS1-205ENST00000467353 GRIN2BQ13224 1484 aa8.18□□□□□ -1.1
CPS1-205ENST00000467353 KCNA4P22459 653 aa8.17□□□□□ -1.1
CPS1-205ENST00000467353 FBXO41Q8TF61 875 aa8.14□□□□□ -1.11
CPS1-205ENST00000467353 PRDM2Q13029 1718 aa8.13□□□□□ -1.11
CPS1-205ENST00000467353 ABCC10Q5T3U5 1492 aa8.13□□□□□ -1.11
CPS1-205ENST00000467353 FGD5Q6ZNL6 1462 aa8.13□□□□□ -1.11
CPS1-205ENST00000467353 NPM1P06748 294 aaKnown RBP eCLIP8.1□□□□□ -1.11
CPS1-205ENST00000467353 ADRA2BP18089 450 aa8.1□□□□□ -1.11
CPS1-205ENST00000467353 KIF13AQ9H1H9 1805 aa8.1□□□□□ -1.11
CPS1-205ENST00000467353 CEP170Q5SW79 1584 aa8.1□□□□□ -1.11
CPS1-205ENST00000467353 WDR97A6NE52 1622 aa8.08□□□□□ -1.12
CPS1-205ENST00000467353 ADGRL1O94910 1474 aa8.07□□□□□ -1.12
CPS1-205ENST00000467353 NUP160Q12769 1436 aa8.07□□□□□ -1.12
CPS1-205ENST00000467353 JPH4Q96JJ6 628 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 401 ms