RNA–Protein interactions for RNA: ENST00000467044.1

NUP188-204, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 584 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-204ENST00000467044 NISCHQ9Y2I1 1504 aa25.12■■□□□ 1.61
NUP188-204ENST00000467044 CCDC180Q9P1Z9 1646 aa22.12■■□□□ 1.13
NUP188-204ENST00000467044 ABCC9O60706 1549 aa21.33■■□□□ 1
NUP188-204ENST00000467044 DCAF8L2P0C7V8 631 aa21■□□□□ 0.95
NUP188-204ENST00000467044 ZCCHC6Q5VYS8 1495 aaKnown RBP21■□□□□ 0.95
NUP188-204ENST00000467044 DCAF1Q9Y4B6 1507 aa20.75■□□□□ 0.91
NUP188-204ENST00000467044 NACADO15069 1562 aa20.71■□□□□ 0.91
NUP188-204ENST00000467044 MYO15BQ96JP2 1530 aa20.67■□□□□ 0.9
NUP188-204ENST00000467044 RB1CC1Q8TDY2 1594 aa20.64■□□□□ 0.9
NUP188-204ENST00000467044 SCRIBQ14160 1630 aa20.3■□□□□ 0.84
NUP188-204ENST00000467044 SHROOM4Q9ULL8 1493 aa20.24■□□□□ 0.83
NUP188-204ENST00000467044 UNC13AQ9UPW8 1703 aa20.2■□□□□ 0.82
NUP188-204ENST00000467044 PABPN1Q86U42 306 aaKnown RBP eCLIP20.05■□□□□ 0.8
NUP188-204ENST00000467044 BICRAQ9NZM4 1560 aa19.99■□□□□ 0.79
NUP188-204ENST00000467044 CECR2Q9BXF3 1484 aa19.56■□□□□ 0.72
NUP188-204ENST00000467044 EIF4G1Q04637 1599 aaKnown RBP19.44■□□□□ 0.7
NUP188-204ENST00000467044 BAZ1AQ9NRL2 1556 aaPredicted RBP19.44■□□□□ 0.7
NUP188-204ENST00000467044 SMARCA4P51532 1647 aa19.41■□□□□ 0.7
NUP188-204ENST00000467044 MROH2BQ7Z745 1585 aa19.4■□□□□ 0.7
NUP188-204ENST00000467044 RSF1Q96T23 1441 aaPredicted RBP19.33■□□□□ 0.68
NUP188-204ENST00000467044 SUPT5HO00267 1087 aaKnown RBP19.29■□□□□ 0.68
NUP188-204ENST00000467044 CC2D2AQ9P2K1 1620 aa19.27■□□□□ 0.68
NUP188-204ENST00000467044 WIZO95785 1651 aa19.23■□□□□ 0.67
NUP188-204ENST00000467044 ATAD2BQ9ULI0 1458 aa19.2■□□□□ 0.66
NUP188-204ENST00000467044 DNAJC5BQ9UF47 199 aa19.19■□□□□ 0.66
NUP188-204ENST00000467044 SMARCA2P51531 1590 aa19.19■□□□□ 0.66
NUP188-204ENST00000467044 PEG3Q9GZU2 1588 aa19.16■□□□□ 0.66
NUP188-204ENST00000467044 NCAPD3P42695 1498 aa19.1■□□□□ 0.65
NUP188-204ENST00000467044 BAZ1BQ9UIG0 1483 aaKnown RBP19.09■□□□□ 0.65
NUP188-204ENST00000467044 HMGXB3Q12766 1538 aa19.03■□□□□ 0.64
NUP188-204ENST00000467044 TOP2AP11388 1531 aaKnown RBP19■□□□□ 0.63
NUP188-204ENST00000467044 CCDC88BA6NC98 1476 aa18.82■□□□□ 0.6
NUP188-204ENST00000467044 CADPSQ9ULU8 1353 aa18.6■□□□□ 0.57
NUP188-204ENST00000467044 NESP48681 1621 aa18.57■□□□□ 0.56
NUP188-204ENST00000467044 CFTRP13569 1480 aa18.55■□□□□ 0.56
NUP188-204ENST00000467044 LAMC3Q9Y6N6 1575 aa18.54■□□□□ 0.56
NUP188-204ENST00000467044 PRDM2Q13029 1718 aa18.46■□□□□ 0.55
NUP188-204ENST00000467044 PDS5BQ9NTI5 1447 aa18.43■□□□□ 0.54
NUP188-204ENST00000467044 FANCD2Q9BXW9 1451 aa18.39■□□□□ 0.54
NUP188-204ENST00000467044 KIF21AQ7Z4S6 1674 aa18.35■□□□□ 0.53
NUP188-204ENST00000467044 ERCC6Q03468 1493 aa18.35■□□□□ 0.53
NUP188-204ENST00000467044 CEP164Q9UPV0 1460 aa18.33■□□□□ 0.52
NUP188-204ENST00000467044 ABCC8Q09428 1581 aa18.29■□□□□ 0.52
NUP188-204ENST00000467044 WRNQ14191 1432 aaPredicted RBP eCLIP18.23■□□□□ 0.51
NUP188-204ENST00000467044 CHIC1Q5VXU3 224 aa18.21■□□□□ 0.51
NUP188-204ENST00000467044 MRC2Q9UBG0 1479 aa18.2■□□□□ 0.5
NUP188-204ENST00000467044 URB2Q14146 1524 aaKnown RBP18.18■□□□□ 0.5
NUP188-204ENST00000467044 TRIM41Q8WV44 630 aa18.17■□□□□ 0.5
NUP188-204ENST00000467044 CUX1P39880 1505 aa18.16■□□□□ 0.5
NUP188-204ENST00000467044 TOPBP1Q92547 1522 aa18.14■□□□□ 0.49
NUP188-204ENST00000467044 SYNJ1O43426 1573 aa18.14■□□□□ 0.49
NUP188-204ENST00000467044 DNMBPQ6XZF7 1577 aa18.14■□□□□ 0.49
NUP188-204ENST00000467044 THOC2Q8NI27 1593 aaKnown RBP18.14■□□□□ 0.49
NUP188-204ENST00000467044 TOP2BQ02880 1626 aa18.11■□□□□ 0.49
NUP188-204ENST00000467044 WDR62O43379 1518 aa18.1■□□□□ 0.49
NUP188-204ENST00000467044 BIVM-ERCC5R4GMW8 1640 aa18.09■□□□□ 0.49
NUP188-204ENST00000467044 FGD5Q6ZNL6 1462 aa18.05■□□□□ 0.48
NUP188-204ENST00000467044 POLA1P09884 1462 aaPredicted RBP18.01■□□□□ 0.47
NUP188-204ENST00000467044 SOGA1O94964 1423 aa17.98■□□□□ 0.47
NUP188-204ENST00000467044 RAD54L2Q9Y4B4 1467 aa17.97■□□□□ 0.47
NUP188-204ENST00000467044 CUX2O14529 1486 aa17.95■□□□□ 0.46
NUP188-204ENST00000467044 IFT140Q96RY7 1462 aa17.91■□□□□ 0.46
NUP188-204ENST00000467044 TARBP1Q13395 1621 aaKnown RBP17.89■□□□□ 0.45
NUP188-204ENST00000467044 ABCA10Q8WWZ4 1543 aa17.87■□□□□ 0.45
NUP188-204ENST00000467044 TDRD9Q8NDG6 1382 aaKnown RBP17.84■□□□□ 0.45
NUP188-204ENST00000467044 FAM9AQ8IZU1 332 aaPredicted RBP17.84■□□□□ 0.45
NUP188-204ENST00000467044 WDR97A6NE52 1622 aa17.83■□□□□ 0.45
NUP188-204ENST00000467044 RUSC2Q8N2Y8 1516 aa17.82■□□□□ 0.44
NUP188-204ENST00000467044 ZNF608Q9ULD9 1512 aaPredicted RBP17.82■□□□□ 0.44
NUP188-204ENST00000467044 KIF27Q86VH2 1401 aa17.81■□□□□ 0.44
NUP188-204ENST00000467044 AQRO60306 1485 aaKnown RBP eCLIP17.8■□□□□ 0.447e-7■■■■■ 38.6
NUP188-204ENST00000467044 GAPVD1Q14C86 1478 aa17.77■□□□□ 0.44
NUP188-204ENST00000467044 ABCA5Q8WWZ7 1642 aa17.75■□□□□ 0.43
NUP188-204ENST00000467044 EIF4G3O43432 1585 aaKnown RBP17.74■□□□□ 0.43
NUP188-204ENST00000467044 EEA1Q15075 1411 aa17.73■□□□□ 0.43
NUP188-204ENST00000467044 CSRNP3Q8WYN3 585 aa17.72■□□□□ 0.43
NUP188-204ENST00000467044 PBRM1Q86U86 1689 aa17.7■□□□□ 0.42
NUP188-204ENST00000467044 GRIN2BQ13224 1484 aa17.69■□□□□ 0.42
NUP188-204ENST00000467044 IGF1RP08069 1367 aa17.68■□□□□ 0.42
NUP188-204ENST00000467044 ERICH3Q5RHP9 1530 aa17.66■□□□□ 0.42
NUP188-204ENST00000467044 EHMT2Q96KQ7 1210 aa17.62■□□□□ 0.41
NUP188-204ENST00000467044 SNAPC4Q5SXM2 1469 aa17.62■□□□□ 0.41
NUP188-204ENST00000467044 CARMIL1Q5VZK9 1371 aa17.61■□□□□ 0.41
NUP188-204ENST00000467044 CUL7Q14999 1698 aa17.59■□□□□ 0.41
NUP188-204ENST00000467044 MAGI1Q96QZ7 1491 aaPredicted RBP17.58■□□□□ 0.41
NUP188-204ENST00000467044 FBLN2P98095 1184 aa17.58■□□□□ 0.4
NUP188-204ENST00000467044 FHAD1B1AJZ9 1412 aa17.56■□□□□ 0.4
NUP188-204ENST00000467044 ADAMTS12P58397 1594 aa17.55■□□□□ 0.4
NUP188-204ENST00000467044 CHMP7Q8WUX9 453 aaPredicted RBP17.55■□□□□ 0.4
NUP188-204ENST00000467044 PRXQ9BXM0 1461 aa17.55■□□□□ 0.4
NUP188-204ENST00000467044 RAPGEF2Q9Y4G8 1499 aa17.53■□□□□ 0.4
NUP188-204ENST00000467044 SYNJ2O15056 1496 aa17.51■□□□□ 0.39
NUP188-204ENST00000467044 KIF21BO75037 1637 aa17.51■□□□□ 0.39
NUP188-204ENST00000467044 LOC105371045A0A1W2PR82 267 aa17.51■□□□□ 0.39
NUP188-204ENST00000467044 UBTFP17480 764 aaKnown RBP17.49■□□□□ 0.39
NUP188-204ENST00000467044 GOLGA3Q08378 1498 aa17.48■□□□□ 0.39
NUP188-204ENST00000467044 CHD1O14646 1710 aa17.47■□□□□ 0.39
NUP188-204ENST00000467044 GRIN2AQ12879 1464 aa17.46■□□□□ 0.39
NUP188-204ENST00000467044 CEP170Q5SW79 1584 aa17.36■□□□□ 0.37
NUP188-204ENST00000467044 RANGAP1P46060 587 aaPredicted RBP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms