RNA–Protein interactions for RNA: ENST00000466901.5

COPS7B-218, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-218ENST00000466901 NISCHQ9Y2I1 1504 aa18.95■□□□□ 0.62
COPS7B-218ENST00000466901 CCDC180Q9P1Z9 1646 aa16.86■□□□□ 0.29
COPS7B-218ENST00000466901 ABCC9O60706 1549 aa16.54■□□□□ 0.24
COPS7B-218ENST00000466901 DCAF8L2P0C7V8 631 aa15.92■□□□□ 0.14
COPS7B-218ENST00000466901 RB1CC1Q8TDY2 1594 aa15.9■□□□□ 0.14
COPS7B-218ENST00000466901 NACADO15069 1562 aa15.87■□□□□ 0.13
COPS7B-218ENST00000466901 ZCCHC6Q5VYS8 1495 aaKnown RBP15.77■□□□□ 0.11
COPS7B-218ENST00000466901 MYO15BQ96JP2 1530 aa15.75■□□□□ 0.11
COPS7B-218ENST00000466901 DCAF1Q9Y4B6 1507 aa15.67■□□□□ 0.1
COPS7B-218ENST00000466901 UNC13AQ9UPW8 1703 aa15.52■□□□□ 0.08
COPS7B-218ENST00000466901 PABPN1Q86U42 306 aaKnown RBP eCLIP15.47■□□□□ 0.07
COPS7B-218ENST00000466901 BICRAQ9NZM4 1560 aa15.39■□□□□ 0.05
COPS7B-218ENST00000466901 SCRIBQ14160 1630 aa15.39■□□□□ 0.05
COPS7B-218ENST00000466901 SHROOM4Q9ULL8 1493 aa15.23■□□□□ 0.03
COPS7B-218ENST00000466901 DNAJC5BQ9UF47 199 aa15.2■□□□□ 0.02
COPS7B-218ENST00000466901 EIF4G1Q04637 1599 aaKnown RBP15□□□□□ -0.01
COPS7B-218ENST00000466901 CC2D2AQ9P2K1 1620 aa14.95□□□□□ -0.02
COPS7B-218ENST00000466901 CECR2Q9BXF3 1484 aa14.87□□□□□ -0.03
COPS7B-218ENST00000466901 SMARCA4P51532 1647 aa14.71□□□□□ -0.05
COPS7B-218ENST00000466901 BAZ1AQ9NRL2 1556 aaPredicted RBP14.7□□□□□ -0.06
COPS7B-218ENST00000466901 NCAPD3P42695 1498 aa14.63□□□□□ -0.07
COPS7B-218ENST00000466901 ATAD2BQ9ULI0 1458 aa14.63□□□□□ -0.07
COPS7B-218ENST00000466901 SMARCA2P51531 1590 aa14.63□□□□□ -0.07
COPS7B-218ENST00000466901 MROH2BQ7Z745 1585 aa14.6□□□□□ -0.07
COPS7B-218ENST00000466901 HMGXB3Q12766 1538 aa14.56□□□□□ -0.08
COPS7B-218ENST00000466901 PEG3Q9GZU2 1588 aa14.56□□□□□ -0.08
COPS7B-218ENST00000466901 BAZ1BQ9UIG0 1483 aaKnown RBP14.53□□□□□ -0.08
COPS7B-218ENST00000466901 WIZO95785 1651 aa14.46□□□□□ -0.1
COPS7B-218ENST00000466901 RSF1Q96T23 1441 aaPredicted RBP14.43□□□□□ -0.1
COPS7B-218ENST00000466901 NESP48681 1621 aa14.3□□□□□ -0.12
COPS7B-218ENST00000466901 TOP2AP11388 1531 aaKnown RBP14.29□□□□□ -0.12
COPS7B-218ENST00000466901 ERCC6Q03468 1493 aa14.28□□□□□ -0.12
COPS7B-218ENST00000466901 LAMC3Q9Y6N6 1575 aa14.26□□□□□ -0.13
COPS7B-218ENST00000466901 CADPSQ9ULU8 1353 aa14.22□□□□□ -0.13
COPS7B-218ENST00000466901 PDS5BQ9NTI5 1447 aa14.19□□□□□ -0.14
COPS7B-218ENST00000466901 CCDC88BA6NC98 1476 aa14.13□□□□□ -0.15
COPS7B-218ENST00000466901 KIF21AQ7Z4S6 1674 aa14.13□□□□□ -0.15
COPS7B-218ENST00000466901 CFTRP13569 1480 aa14.12□□□□□ -0.15
COPS7B-218ENST00000466901 CUX2O14529 1486 aa14.12□□□□□ -0.15
COPS7B-218ENST00000466901 SUPT5HO00267 1087 aaKnown RBP14.1□□□□□ -0.15
COPS7B-218ENST00000466901 THOC2Q8NI27 1593 aaKnown RBP14.06□□□□□ -0.16
COPS7B-218ENST00000466901 FANCD2Q9BXW9 1451 aa14.06□□□□□ -0.16
COPS7B-218ENST00000466901 CEP164Q9UPV0 1460 aa14.04□□□□□ -0.16
COPS7B-218ENST00000466901 PRDM2Q13029 1718 aa14.02□□□□□ -0.16
COPS7B-218ENST00000466901 MRC2Q9UBG0 1479 aa14.02□□□□□ -0.16
COPS7B-218ENST00000466901 WDR62O43379 1518 aa13.96□□□□□ -0.17
COPS7B-218ENST00000466901 URB2Q14146 1524 aaKnown RBP13.9□□□□□ -0.18
COPS7B-218ENST00000466901 ABCC8Q09428 1581 aa13.83□□□□□ -0.19
COPS7B-218ENST00000466901 TOPBP1Q92547 1522 aa13.82□□□□□ -0.2
COPS7B-218ENST00000466901 DNMBPQ6XZF7 1577 aa13.8□□□□□ -0.2
COPS7B-218ENST00000466901 IFT140Q96RY7 1462 aa13.74□□□□□ -0.21
COPS7B-218ENST00000466901 DNAJC5Q9H3Z4 198 aa13.74□□□□□ -0.21
COPS7B-218ENST00000466901 POLA1P09884 1462 aaPredicted RBP13.7□□□□□ -0.22
COPS7B-218ENST00000466901 CUX1P39880 1505 aa13.69□□□□□ -0.22
COPS7B-218ENST00000466901 ZNF608Q9ULD9 1512 aaPredicted RBP13.68□□□□□ -0.22
COPS7B-218ENST00000466901 FGD5Q6ZNL6 1462 aa13.67□□□□□ -0.22
COPS7B-218ENST00000466901 SOGA1O94964 1423 aa13.66□□□□□ -0.22
COPS7B-218ENST00000466901 TARBP1Q13395 1621 aaKnown RBP13.66□□□□□ -0.22
COPS7B-218ENST00000466901 RAD54L2Q9Y4B4 1467 aa13.65□□□□□ -0.22
COPS7B-218ENST00000466901 EIF4G3O43432 1585 aaKnown RBP13.62□□□□□ -0.23
COPS7B-218ENST00000466901 WRNQ14191 1432 aaPredicted RBP eCLIP13.62□□□□□ -0.23
COPS7B-218ENST00000466901 AQRO60306 1485 aaKnown RBP eCLIP13.61□□□□□ -0.23
COPS7B-218ENST00000466901 TDRD9Q8NDG6 1382 aaKnown RBP13.59□□□□□ -0.23
COPS7B-218ENST00000466901 TOP2BQ02880 1626 aa13.58□□□□□ -0.24
COPS7B-218ENST00000466901 BIVM-ERCC5R4GMW8 1640 aa13.57□□□□□ -0.24
COPS7B-218ENST00000466901 OSCARQ8IYS5 282 aa13.57□□□□□ -0.24
COPS7B-218ENST00000466901 SYNJ1O43426 1573 aa13.57□□□□□ -0.24
COPS7B-218ENST00000466901 WDR97A6NE52 1622 aa13.56□□□□□ -0.24
COPS7B-218ENST00000466901 ABCA10Q8WWZ4 1543 aa13.53□□□□□ -0.24
COPS7B-218ENST00000466901 GRIN2BQ13224 1484 aa13.5□□□□□ -0.25
COPS7B-218ENST00000466901 GAPVD1Q14C86 1478 aa13.5□□□□□ -0.25
COPS7B-218ENST00000466901 FBLN2P98095 1184 aa13.5□□□□□ -0.25
COPS7B-218ENST00000466901 SNAPC4Q5SXM2 1469 aa13.48□□□□□ -0.25
COPS7B-218ENST00000466901 CHD1O14646 1710 aa13.47□□□□□ -0.25
COPS7B-218ENST00000466901 PBRM1Q86U86 1689 aa13.47□□□□□ -0.25
COPS7B-218ENST00000466901 ABCA5Q8WWZ7 1642 aa13.46□□□□□ -0.25
COPS7B-218ENST00000466901 MAGI1Q96QZ7 1491 aaPredicted RBP13.46□□□□□ -0.25
COPS7B-218ENST00000466901 CHMP7Q8WUX9 453 aaPredicted RBP13.45□□□□□ -0.26
COPS7B-218ENST00000466901 SYNJ2O15056 1496 aa13.42□□□□□ -0.26
COPS7B-218ENST00000466901 ERICH3Q5RHP9 1530 aa13.38□□□□□ -0.27
COPS7B-218ENST00000466901 KIF27Q86VH2 1401 aa13.35□□□□□ -0.27
COPS7B-218ENST00000466901 FHAD1B1AJZ9 1412 aa13.34□□□□□ -0.27
COPS7B-218ENST00000466901 ADAMTS12P58397 1594 aa13.33□□□□□ -0.28
COPS7B-218ENST00000466901 GRIN2AQ12879 1464 aa13.32□□□□□ -0.28
COPS7B-218ENST00000466901 TRIM41Q8WV44 630 aa13.32□□□□□ -0.28
COPS7B-218ENST00000466901 RIMBP3CA6NJZ7 1639 aa13.31□□□□□ -0.28
COPS7B-218ENST00000466901 RIMBP3BA6NNM3 1639 aa13.31□□□□□ -0.28
COPS7B-218ENST00000466901 RIMBP3Q9UFD9 1639 aa13.31□□□□□ -0.28
COPS7B-218ENST00000466901 ARHGEF11O15085 1522 aa13.3□□□□□ -0.28
COPS7B-218ENST00000466901 CLASP1Q7Z460 1538 aa13.29□□□□□ -0.28
COPS7B-218ENST00000466901 IGF1RP08069 1367 aa13.29□□□□□ -0.28
COPS7B-218ENST00000466901 CUL7Q14999 1698 aa13.25□□□□□ -0.29
COPS7B-218ENST00000466901 NUP160Q12769 1436 aa13.25□□□□□ -0.29
COPS7B-218ENST00000466901 CEP170Q5SW79 1584 aa13.24□□□□□ -0.29
COPS7B-218ENST00000466901 CYB5RLQ6IPT4 315 aa13.23□□□□□ -0.29
COPS7B-218ENST00000466901 AEBP2Q6ZN18 517 aaPredicted RBP13.23□□□□□ -0.29
COPS7B-218ENST00000466901 CARMIL1Q5VZK9 1371 aa13.22□□□□□ -0.29
COPS7B-218ENST00000466901 RUSC2Q8N2Y8 1516 aa13.19□□□□□ -0.3
COPS7B-218ENST00000466901 ARAP1Q96P48 1450 aa13.18□□□□□ -0.3
COPS7B-218ENST00000466901 JPH4Q96JJ6 628 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms