RNA–Protein interactions for RNA: ENST00000466822.1

ABCD4-204, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 2

Gene ABCD4, Length 520 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-204ENST00000466822 NISCHQ9Y2I1 1504 aa34.85■■■■□ 3.17
ABCD4-204ENST00000466822 CCDC180Q9P1Z9 1646 aa30.95■■■□□ 2.54
ABCD4-204ENST00000466822 ABCC9O60706 1549 aa30.27■■■□□ 2.44
ABCD4-204ENST00000466822 NACADO15069 1562 aa29.2■■■□□ 2.26
ABCD4-204ENST00000466822 RB1CC1Q8TDY2 1594 aa29.2■■■□□ 2.26
ABCD4-204ENST00000466822 DCAF8L2P0C7V8 631 aa29.14■■■□□ 2.26
ABCD4-204ENST00000466822 MYO15BQ96JP2 1530 aa29.11■■■□□ 2.25
ABCD4-204ENST00000466822 ZCCHC6Q5VYS8 1495 aaKnown RBP28.98■■■□□ 2.23
ABCD4-204ENST00000466822 DCAF1Q9Y4B6 1507 aa28.93■■■□□ 2.22
ABCD4-204ENST00000466822 PABPN1Q86U42 306 aaKnown RBP eCLIP28.32■■■□□ 2.12
ABCD4-204ENST00000466822 UNC13AQ9UPW8 1703 aa28.28■■■□□ 2.12
ABCD4-204ENST00000466822 BICRAQ9NZM4 1560 aa28.2■■■□□ 2.11
ABCD4-204ENST00000466822 SHROOM4Q9ULL8 1493 aa28.15■■■□□ 2.1
ABCD4-204ENST00000466822 SCRIBQ14160 1630 aa28.11■■■□□ 2.09
ABCD4-204ENST00000466822 DNAJC5BQ9UF47 199 aa27.84■■■□□ 2.05
ABCD4-204ENST00000466822 EIF4G1Q04637 1599 aaKnown RBP27.52■■■□□ 2
ABCD4-204ENST00000466822 CC2D2AQ9P2K1 1620 aa27.37■■□□□ 1.97
ABCD4-204ENST00000466822 CECR2Q9BXF3 1484 aa27.27■■□□□ 1.96
ABCD4-204ENST00000466822 BAZ1AQ9NRL2 1556 aaPredicted RBP27.03■■□□□ 1.92
ABCD4-204ENST00000466822 NCAPD3P42695 1498 aa26.98■■□□□ 1.91
ABCD4-204ENST00000466822 SMARCA4P51532 1647 aa26.97■■□□□ 1.91
ABCD4-204ENST00000466822 ATAD2BQ9ULI0 1458 aa26.91■■□□□ 1.9
ABCD4-204ENST00000466822 SMARCA2P51531 1590 aa26.91■■□□□ 1.9
ABCD4-204ENST00000466822 PEG3Q9GZU2 1588 aa26.8■■□□□ 1.88
ABCD4-204ENST00000466822 MROH2BQ7Z745 1585 aa26.77■■□□□ 1.88
ABCD4-204ENST00000466822 HMGXB3Q12766 1538 aa26.77■■□□□ 1.88
ABCD4-204ENST00000466822 BAZ1BQ9UIG0 1483 aaKnown RBP26.68■■□□□ 1.86
ABCD4-204ENST00000466822 RSF1Q96T23 1441 aaPredicted RBP26.55■■□□□ 1.84
ABCD4-204ENST00000466822 WIZO95785 1651 aa26.41■■□□□ 1.82
ABCD4-204ENST00000466822 TOP2AP11388 1531 aaKnown RBP26.24■■□□□ 1.79
ABCD4-204ENST00000466822 LAMC3Q9Y6N6 1575 aa26.21■■□□□ 1.79
ABCD4-204ENST00000466822 CADPSQ9ULU8 1353 aa26.2■■□□□ 1.78
ABCD4-204ENST00000466822 ERCC6Q03468 1493 aa26.17■■□□□ 1.78
ABCD4-204ENST00000466822 NESP48681 1621 aa26.14■■□□□ 1.78
ABCD4-204ENST00000466822 PDS5BQ9NTI5 1447 aa26.13■■□□□ 1.77
ABCD4-204ENST00000466822 CFTRP13569 1480 aa25.99■■□□□ 1.75
ABCD4-204ENST00000466822 CUX2O14529 1486 aa25.98■■□□□ 1.75
ABCD4-204ENST00000466822 CCDC88BA6NC98 1476 aa25.95■■□□□ 1.74
ABCD4-204ENST00000466822 FANCD2Q9BXW9 1451 aa25.81■■□□□ 1.72
ABCD4-204ENST00000466822 SUPT5HO00267 1087 aaKnown RBP25.81■■□□□ 1.72
ABCD4-204ENST00000466822 CEP164Q9UPV0 1460 aa25.79■■□□□ 1.72
ABCD4-204ENST00000466822 MRC2Q9UBG0 1479 aa25.76■■□□□ 1.71
ABCD4-204ENST00000466822 KIF21AQ7Z4S6 1674 aa25.76■■□□□ 1.71
ABCD4-204ENST00000466822 THOC2Q8NI27 1593 aaKnown RBP25.75■■□□□ 1.71
ABCD4-204ENST00000466822 WDR62O43379 1518 aa25.64■■□□□ 1.7
ABCD4-204ENST00000466822 PRDM2Q13029 1718 aa25.6■■□□□ 1.69
ABCD4-204ENST00000466822 ABCC8Q09428 1581 aa25.54■■□□□ 1.68
ABCD4-204ENST00000466822 URB2Q14146 1524 aaKnown RBP25.49■■□□□ 1.67
ABCD4-204ENST00000466822 TOPBP1Q92547 1522 aa25.37■■□□□ 1.65
ABCD4-204ENST00000466822 DNMBPQ6XZF7 1577 aa25.34■■□□□ 1.65
ABCD4-204ENST00000466822 DNAJC5Q9H3Z4 198 aa25.33■■□□□ 1.65
ABCD4-204ENST00000466822 IFT140Q96RY7 1462 aa25.3■■□□□ 1.64
ABCD4-204ENST00000466822 POLA1P09884 1462 aaPredicted RBP25.15■■□□□ 1.62
ABCD4-204ENST00000466822 SOGA1O94964 1423 aa25.12■■□□□ 1.61
ABCD4-204ENST00000466822 CUX1P39880 1505 aa25.12■■□□□ 1.61
ABCD4-204ENST00000466822 FGD5Q6ZNL6 1462 aa25.07■■□□□ 1.6
ABCD4-204ENST00000466822 ZNF608Q9ULD9 1512 aaPredicted RBP25.05■■□□□ 1.6
ABCD4-204ENST00000466822 TARBP1Q13395 1621 aaKnown RBP25.04■■□□□ 1.6
ABCD4-204ENST00000466822 WRNQ14191 1432 aaPredicted RBP eCLIP25.04■■□□□ 1.6
ABCD4-204ENST00000466822 RAD54L2Q9Y4B4 1467 aa25■■□□□ 1.59
ABCD4-204ENST00000466822 WDR97A6NE52 1622 aa25■■□□□ 1.59
ABCD4-204ENST00000466822 OSCARQ8IYS5 282 aa24.97■■□□□ 1.59
ABCD4-204ENST00000466822 AQRO60306 1485 aaKnown RBP eCLIP24.96■■□□□ 1.592e-9■■■■□ 25.2
ABCD4-204ENST00000466822 TOP2BQ02880 1626 aa24.94■■□□□ 1.58
ABCD4-204ENST00000466822 TDRD9Q8NDG6 1382 aaKnown RBP24.93■■□□□ 1.58
ABCD4-204ENST00000466822 EIF4G3O43432 1585 aaKnown RBP24.92■■□□□ 1.58
ABCD4-204ENST00000466822 ABCA10Q8WWZ4 1543 aa24.89■■□□□ 1.57
ABCD4-204ENST00000466822 BIVM-ERCC5R4GMW8 1640 aa24.89■■□□□ 1.57
ABCD4-204ENST00000466822 GRIN2BQ13224 1484 aa24.83■■□□□ 1.57
ABCD4-204ENST00000466822 SYNJ1O43426 1573 aa24.83■■□□□ 1.57
ABCD4-204ENST00000466822 GAPVD1Q14C86 1478 aa24.81■■□□□ 1.56
ABCD4-204ENST00000466822 MAGI1Q96QZ7 1491 aaPredicted RBP24.77■■□□□ 1.56
ABCD4-204ENST00000466822 CHMP7Q8WUX9 453 aaPredicted RBP24.73■■□□□ 1.55
ABCD4-204ENST00000466822 FBLN2P98095 1184 aa24.72■■□□□ 1.55
ABCD4-204ENST00000466822 SNAPC4Q5SXM2 1469 aa24.7■■□□□ 1.55
ABCD4-204ENST00000466822 ABCA5Q8WWZ7 1642 aa24.68■■□□□ 1.54
ABCD4-204ENST00000466822 SYNJ2O15056 1496 aa24.66■■□□□ 1.54
ABCD4-204ENST00000466822 ERICH3Q5RHP9 1530 aa24.61■■□□□ 1.53
ABCD4-204ENST00000466822 KIF27Q86VH2 1401 aa24.58■■□□□ 1.53
ABCD4-204ENST00000466822 PBRM1Q86U86 1689 aa24.57■■□□□ 1.52
ABCD4-204ENST00000466822 FHAD1B1AJZ9 1412 aa24.57■■□□□ 1.52
ABCD4-204ENST00000466822 CHD1O14646 1710 aa24.55■■□□□ 1.52
ABCD4-204ENST00000466822 TRIM41Q8WV44 630 aa24.49■■□□□ 1.51
ABCD4-204ENST00000466822 IGF1RP08069 1367 aa24.47■■□□□ 1.51
ABCD4-204ENST00000466822 GRIN2AQ12879 1464 aa24.46■■□□□ 1.51
ABCD4-204ENST00000466822 ADAMTS12P58397 1594 aa24.45■■□□□ 1.5
ABCD4-204ENST00000466822 CLASP1Q7Z460 1538 aa24.4■■□□□ 1.5
ABCD4-204ENST00000466822 NUP160Q12769 1436 aa24.39■■□□□ 1.5
ABCD4-204ENST00000466822 ARHGEF11O15085 1522 aa24.39■■□□□ 1.49
ABCD4-204ENST00000466822 RIMBP3CA6NJZ7 1639 aa24.32■■□□□ 1.48
ABCD4-204ENST00000466822 RIMBP3BA6NNM3 1639 aa24.32■■□□□ 1.48
ABCD4-204ENST00000466822 RIMBP3Q9UFD9 1639 aa24.32■■□□□ 1.48
ABCD4-204ENST00000466822 CARMIL1Q5VZK9 1371 aa24.32■■□□□ 1.48
ABCD4-204ENST00000466822 CUL7Q14999 1698 aa24.31■■□□□ 1.48
ABCD4-204ENST00000466822 CEP170Q5SW79 1584 aa24.25■■□□□ 1.47
ABCD4-204ENST00000466822 CYB5RLQ6IPT4 315 aa24.24■■□□□ 1.47
ABCD4-204ENST00000466822 JPH4Q96JJ6 628 aa24.21■■□□□ 1.47
ABCD4-204ENST00000466822 KIAA0586Q9BVV6 1533 aa24.19■■□□□ 1.46
ABCD4-204ENST00000466822 ARAP1Q96P48 1450 aa24.17■■□□□ 1.46
ABCD4-204ENST00000466822 RAPGEF2Q9Y4G8 1499 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms