RNA–Protein interactions for RNA: ENST00000466611.1

SDK1-204, Transcript of sidekick cell adhesion molecule 1, humanhuman

TSL 2

Gene SDK1, Length 2,108 nt, Biotype processed transcript.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDK1-204ENST00000466611 NISCHQ9Y2I1 1504 aa36.25■■■■□ 3.39
SDK1-204ENST00000466611 CCDC180Q9P1Z9 1646 aa31.86■■■□□ 2.69
SDK1-204ENST00000466611 ABCC9O60706 1549 aa30.5■■■□□ 2.47
SDK1-204ENST00000466611 ZCCHC6Q5VYS8 1495 aaKnown RBP30.37■■■□□ 2.45
SDK1-204ENST00000466611 DCAF1Q9Y4B6 1507 aa30■■■□□ 2.39
SDK1-204ENST00000466611 DCAF8L2P0C7V8 631 aa29.95■■■□□ 2.38
SDK1-204ENST00000466611 MYO15BQ96JP2 1530 aa29.83■■■□□ 2.37
SDK1-204ENST00000466611 NACADO15069 1562 aa29.76■■■□□ 2.35
SDK1-204ENST00000466611 RB1CC1Q8TDY2 1594 aa29.61■■■□□ 2.33
SDK1-204ENST00000466611 SHROOM4Q9ULL8 1493 aa29.31■■■□□ 2.28
SDK1-204ENST00000466611 SCRIBQ14160 1630 aa29.18■■■□□ 2.26
SDK1-204ENST00000466611 UNC13AQ9UPW8 1703 aa29.02■■■□□ 2.24
SDK1-204ENST00000466611 BICRAQ9NZM4 1560 aa28.78■■■□□ 2.2
SDK1-204ENST00000466611 PABPN1Q86U42 306 aaKnown RBP eCLIP28.64■■■□□ 2.18
SDK1-204ENST00000466611 PELP1Q8IZL8 1130 aaKnown RBP28.55■■■□□ 2.16
SDK1-204ENST00000466611 SUPT5HO00267 1087 aaKnown RBP28.34■■■□□ 2.13
SDK1-204ENST00000466611 CECR2Q9BXF3 1484 aa28.21■■■□□ 2.11
SDK1-204ENST00000466611 MYT1Q01538 1121 aa28.1■■■□□ 2.09
SDK1-204ENST00000466611 BAZ1AQ9NRL2 1556 aaPredicted RBP28.01■■■□□ 2.07
SDK1-204ENST00000466611 MROH2BQ7Z745 1585 aa27.99■■■□□ 2.07
SDK1-204ENST00000466611 SMARCA4P51532 1647 aa27.97■■■□□ 2.07
SDK1-204ENST00000466611 RSF1Q96T23 1441 aaPredicted RBP27.92■■■□□ 2.06
SDK1-204ENST00000466611 EIF4G1Q04637 1599 aaKnown RBP27.91■■■□□ 2.06
SDK1-204ENST00000466611 WIZO95785 1651 aa27.72■■■□□ 2.03
SDK1-204ENST00000466611 PEG3Q9GZU2 1588 aa27.68■■■□□ 2.02
SDK1-204ENST00000466611 ATAD2BQ9ULI0 1458 aa27.63■■■□□ 2.01
SDK1-204ENST00000466611 CC2D2AQ9P2K1 1620 aa27.62■■■□□ 2.01
SDK1-204ENST00000466611 SMARCA2P51531 1590 aa27.58■■■□□ 2.01
SDK1-204ENST00000466611 NCAPD3P42695 1498 aa27.48■■□□□ 1.99
SDK1-204ENST00000466611 TOP2AP11388 1531 aaKnown RBP27.43■■□□□ 1.98
SDK1-204ENST00000466611 BAZ1BQ9UIG0 1483 aaKnown RBP27.42■■□□□ 1.98
SDK1-204ENST00000466611 HMGXB3Q12766 1538 aa27.4■■□□□ 1.98
SDK1-204ENST00000466611 DNAJC5BQ9UF47 199 aa27.37■■□□□ 1.97
SDK1-204ENST00000466611 CHIC1Q5VXU3 224 aa27.31■■□□□ 1.96
SDK1-204ENST00000466611 CCDC88BA6NC98 1476 aa27.14■■□□□ 1.93
SDK1-204ENST00000466611 TTBK1Q5TCY1 1321 aaPredicted RBP26.95■■□□□ 1.9
SDK1-204ENST00000466611 HRCP23327 699 aa26.91■■□□□ 1.9
SDK1-204ENST00000466611 CFTRP13569 1480 aa26.73■■□□□ 1.87
SDK1-204ENST00000466611 CADPSQ9ULU8 1353 aa26.71■■□□□ 1.87
SDK1-204ENST00000466611 NESP48681 1621 aa26.65■■□□□ 1.86
SDK1-204ENST00000466611 LAMC3Q9Y6N6 1575 aa26.61■■□□□ 1.85
SDK1-204ENST00000466611 PRDM2Q13029 1718 aa26.56■■□□□ 1.84
SDK1-204ENST00000466611 TRIM41Q8WV44 630 aa26.56■■□□□ 1.84
SDK1-204ENST00000466611 FANCD2Q9BXW9 1451 aa26.41■■□□□ 1.82
SDK1-204ENST00000466611 ABCC8Q09428 1581 aa26.39■■□□□ 1.82
SDK1-204ENST00000466611 PDS5BQ9NTI5 1447 aa26.39■■□□□ 1.81
SDK1-204ENST00000466611 LOC105371045A0A1W2PR82 267 aa26.35■■□□□ 1.81
SDK1-204ENST00000466611 KIF21AQ7Z4S6 1674 aa26.33■■□□□ 1.81
SDK1-204ENST00000466611 CEP164Q9UPV0 1460 aa26.29■■□□□ 1.8
SDK1-204ENST00000466611 WRNQ14191 1432 aaPredicted RBP eCLIP26.27■■□□□ 1.8
SDK1-204ENST00000466611 SYNJ1O43426 1573 aa26.22■■□□□ 1.79
SDK1-204ENST00000466611 CUX1P39880 1505 aa26.2■■□□□ 1.78
SDK1-204ENST00000466611 ERCC6Q03468 1493 aa26.17■■□□□ 1.78
SDK1-204ENST00000466611 FAM9AQ8IZU1 332 aaPredicted RBP26.16■■□□□ 1.78
SDK1-204ENST00000466611 TOP2BQ02880 1626 aa26.15■■□□□ 1.78
SDK1-204ENST00000466611 URB2Q14146 1524 aaKnown RBP26.15■■□□□ 1.78
SDK1-204ENST00000466611 BIVM-ERCC5R4GMW8 1640 aa26.14■■□□□ 1.78
SDK1-204ENST00000466611 DNMBPQ6XZF7 1577 aa26.11■■□□□ 1.77
SDK1-204ENST00000466611 MRC2Q9UBG0 1479 aa26.11■■□□□ 1.77
SDK1-204ENST00000466611 TOPBP1Q92547 1522 aa26.09■■□□□ 1.77
SDK1-204ENST00000466611 THOC2Q8NI27 1593 aaKnown RBP26.06■■□□□ 1.76
SDK1-204ENST00000466611 WDR62O43379 1518 aa26.02■■□□□ 1.76
SDK1-204ENST00000466611 SCAF1Q9H7N4 1312 aaKnown RBP25.98■■□□□ 1.75
SDK1-204ENST00000466611 FGD5Q6ZNL6 1462 aa25.97■■□□□ 1.75
SDK1-204ENST00000466611 POLA1P09884 1462 aaPredicted RBP25.93■■□□□ 1.74
SDK1-204ENST00000466611 SOGA1O94964 1423 aa25.9■■□□□ 1.74
SDK1-204ENST00000466611 EHMT2Q96KQ7 1210 aa25.84■■□□□ 1.73
SDK1-204ENST00000466611 RAD54L2Q9Y4B4 1467 aa25.83■■□□□ 1.73
SDK1-204ENST00000466611 RUSC2Q8N2Y8 1516 aa25.82■■□□□ 1.72
SDK1-204ENST00000466611 CUX2O14529 1486 aa25.82■■□□□ 1.72
SDK1-204ENST00000466611 TARBP1Q13395 1621 aaKnown RBP25.77■■□□□ 1.72
SDK1-204ENST00000466611 EEA1Q15075 1411 aa25.77■■□□□ 1.72
SDK1-204ENST00000466611 ABCA10Q8WWZ4 1543 aa25.74■■□□□ 1.71
SDK1-204ENST00000466611 WDR97A6NE52 1622 aa25.74■■□□□ 1.71
SDK1-204ENST00000466611 IFT140Q96RY7 1462 aa25.7■■□□□ 1.71
SDK1-204ENST00000466611 PPARGC1BQ86YN6 1023 aaKnown RBP25.68■■□□□ 1.7
SDK1-204ENST00000466611 CSRNP3Q8WYN3 585 aa25.67■■□□□ 1.7
SDK1-204ENST00000466611 KIF27Q86VH2 1401 aa25.63■■□□□ 1.69
SDK1-204ENST00000466611 ABCA5Q8WWZ7 1642 aa25.6■■□□□ 1.69
SDK1-204ENST00000466611 TDRD9Q8NDG6 1382 aaKnown RBP25.6■■□□□ 1.69
SDK1-204ENST00000466611 ZNF608Q9ULD9 1512 aaPredicted RBP25.59■■□□□ 1.69
SDK1-204ENST00000466611 AQRO60306 1485 aaKnown RBP eCLIP25.53■■□□□ 1.68
SDK1-204ENST00000466611 GAPVD1Q14C86 1478 aa25.52■■□□□ 1.68
SDK1-204ENST00000466611 EIF4G3O43432 1585 aaKnown RBP25.5■■□□□ 1.67
SDK1-204ENST00000466611 KIF21BO75037 1637 aa25.49■■□□□ 1.67
SDK1-204ENST00000466611 IGF1RP08069 1367 aa25.49■■□□□ 1.67
SDK1-204ENST00000466611 GOLGA3Q08378 1498 aa25.49■■□□□ 1.67
SDK1-204ENST00000466611 TNIKQ9UKE5 1360 aa25.48■■□□□ 1.67
SDK1-204ENST00000466611 PCGF6Q9BYE7 350 aa25.47■■□□□ 1.67
SDK1-204ENST00000466611 PBRM1Q86U86 1689 aa25.43■■□□□ 1.66
SDK1-204ENST00000466611 PRKCSHP14314 528 aaPredicted RBP25.43■■□□□ 1.66
SDK1-204ENST00000466611 ERICH3Q5RHP9 1530 aa25.43■■□□□ 1.66
SDK1-204ENST00000466611 CEP162Q5TB80 1403 aa25.41■■□□□ 1.66
SDK1-204ENST00000466611 GRIN2BQ13224 1484 aa25.4■■□□□ 1.66
SDK1-204ENST00000466611 PRXQ9BXM0 1461 aa25.39■■□□□ 1.65
SDK1-204ENST00000466611 ERICH6Q7L0X2 663 aa25.39■■□□□ 1.65
SDK1-204ENST00000466611 UBTFP17480 764 aaKnown RBP25.37■■□□□ 1.65
SDK1-204ENST00000466611 RAPGEF2Q9Y4G8 1499 aa25.35■■□□□ 1.65
SDK1-204ENST00000466611 CUL7Q14999 1698 aa25.34■■□□□ 1.65
SDK1-204ENST00000466611 CARMIL1Q5VZK9 1371 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 166.2 ms