RNA–Protein interactions for RNA: ENST00000466544.5

RNFT1-202, Transcript of ring finger protein, transmembrane 1, humanhuman

TSL 2

Gene RNFT1, Length 1,809 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1-202ENST00000466544 NISCHQ9Y2I1 1504 aa32.13■■■□□ 2.73
RNFT1-202ENST00000466544 CCDC180Q9P1Z9 1646 aa28.1■■■□□ 2.09
RNFT1-202ENST00000466544 ABCC9O60706 1549 aa27.13■■□□□ 1.93
RNFT1-202ENST00000466544 ZCCHC6Q5VYS8 1495 aaKnown RBP26.89■■□□□ 1.9
RNFT1-202ENST00000466544 DCAF8L2P0C7V8 631 aa26.86■■□□□ 1.89
RNFT1-202ENST00000466544 DCAF1Q9Y4B6 1507 aa26.47■■□□□ 1.83
RNFT1-202ENST00000466544 NACADO15069 1562 aa26.3■■□□□ 1.8
RNFT1-202ENST00000466544 MYO15BQ96JP2 1530 aa26.28■■□□□ 1.8
RNFT1-202ENST00000466544 RB1CC1Q8TDY2 1594 aa26.19■■□□□ 1.78
RNFT1-202ENST00000466544 SHROOM4Q9ULL8 1493 aa26.11■■□□□ 1.77
RNFT1-202ENST00000466544 SCRIBQ14160 1630 aa25.93■■□□□ 1.74
RNFT1-202ENST00000466544 UNC13AQ9UPW8 1703 aa25.68■■□□□ 1.7
RNFT1-202ENST00000466544 PABPN1Q86U42 306 aaKnown RBP eCLIP25.58■■□□□ 1.69
RNFT1-202ENST00000466544 BICRAQ9NZM4 1560 aa25.48■■□□□ 1.67
RNFT1-202ENST00000466544 CECR2Q9BXF3 1484 aa25.09■■□□□ 1.61
RNFT1-202ENST00000466544 SUPT5HO00267 1087 aaKnown RBP24.91■■□□□ 1.58
RNFT1-202ENST00000466544 MROH2BQ7Z745 1585 aa24.86■■□□□ 1.57
RNFT1-202ENST00000466544 RSF1Q96T23 1441 aaPredicted RBP24.82■■□□□ 1.56
RNFT1-202ENST00000466544 BAZ1AQ9NRL2 1556 aaPredicted RBP24.8■■□□□ 1.56
RNFT1-202ENST00000466544 SMARCA4P51532 1647 aa24.77■■□□□ 1.56
RNFT1-202ENST00000466544 EIF4G1Q04637 1599 aaKnown RBP24.73■■□□□ 1.55
RNFT1-202ENST00000466544 WIZO95785 1651 aa24.63■■□□□ 1.53
RNFT1-202ENST00000466544 ATAD2BQ9ULI0 1458 aa24.5■■□□□ 1.51
RNFT1-202ENST00000466544 CC2D2AQ9P2K1 1620 aa24.48■■□□□ 1.51
RNFT1-202ENST00000466544 PEG3Q9GZU2 1588 aa24.43■■□□□ 1.5
RNFT1-202ENST00000466544 SMARCA2P51531 1590 aa24.4■■□□□ 1.5
RNFT1-202ENST00000466544 DNAJC5BQ9UF47 199 aa24.4■■□□□ 1.5
RNFT1-202ENST00000466544 NCAPD3P42695 1498 aa24.33■■□□□ 1.48
RNFT1-202ENST00000466544 BAZ1BQ9UIG0 1483 aaKnown RBP24.33■■□□□ 1.48
RNFT1-202ENST00000466544 TOP2AP11388 1531 aaKnown RBP24.3■■□□□ 1.48
RNFT1-202ENST00000466544 HMGXB3Q12766 1538 aa24.21■■□□□ 1.47
RNFT1-202ENST00000466544 CCDC88BA6NC98 1476 aa24.11■■□□□ 1.45
RNFT1-202ENST00000466544 NESP48681 1621 aa23.71■■□□□ 1.39
RNFT1-202ENST00000466544 CADPSQ9ULU8 1353 aa23.7■■□□□ 1.39
RNFT1-202ENST00000466544 CFTRP13569 1480 aa23.68■■□□□ 1.38
RNFT1-202ENST00000466544 CHIC1Q5VXU3 224 aa23.58■■□□□ 1.37
RNFT1-202ENST00000466544 LAMC3Q9Y6N6 1575 aa23.52■■□□□ 1.36
RNFT1-202ENST00000466544 ABCC8Q09428 1581 aa23.5■■□□□ 1.35
RNFT1-202ENST00000466544 FANCD2Q9BXW9 1451 aa23.44■■□□□ 1.34
RNFT1-202ENST00000466544 PRDM2Q13029 1718 aa23.44■■□□□ 1.34
RNFT1-202ENST00000466544 PDS5BQ9NTI5 1447 aa23.39■■□□□ 1.34
RNFT1-202ENST00000466544 TRIM41Q8WV44 630 aa23.38■■□□□ 1.33
RNFT1-202ENST00000466544 WRNQ14191 1432 aaPredicted RBP eCLIP23.35■■□□□ 1.33
RNFT1-202ENST00000466544 KIF21AQ7Z4S6 1674 aa23.34■■□□□ 1.33
RNFT1-202ENST00000466544 CEP164Q9UPV0 1460 aa23.31■■□□□ 1.32
RNFT1-202ENST00000466544 SYNJ1O43426 1573 aa23.28■■□□□ 1.32
RNFT1-202ENST00000466544 CUX1P39880 1505 aa23.26■■□□□ 1.31
RNFT1-202ENST00000466544 ERCC6Q03468 1493 aa23.26■■□□□ 1.31
RNFT1-202ENST00000466544 URB2Q14146 1524 aaKnown RBP23.2■■□□□ 1.3
RNFT1-202ENST00000466544 TOP2BQ02880 1626 aa23.16■■□□□ 1.3
RNFT1-202ENST00000466544 TOPBP1Q92547 1522 aa23.14■■□□□ 1.3
RNFT1-202ENST00000466544 MRC2Q9UBG0 1479 aa23.13■■□□□ 1.29
RNFT1-202ENST00000466544 BIVM-ERCC5R4GMW8 1640 aa23.12■■□□□ 1.29
RNFT1-202ENST00000466544 DNMBPQ6XZF7 1577 aa23.11■■□□□ 1.29
RNFT1-202ENST00000466544 FGD5Q6ZNL6 1462 aa23.06■■□□□ 1.28
RNFT1-202ENST00000466544 FAM9AQ8IZU1 332 aaPredicted RBP23.04■■□□□ 1.28
RNFT1-202ENST00000466544 THOC2Q8NI27 1593 aaKnown RBP23.04■■□□□ 1.28
RNFT1-202ENST00000466544 POLA1P09884 1462 aaPredicted RBP23.01■■□□□ 1.27
RNFT1-202ENST00000466544 SOGA1O94964 1423 aa23■■□□□ 1.27
RNFT1-202ENST00000466544 RAD54L2Q9Y4B4 1467 aa23■■□□□ 1.27
RNFT1-202ENST00000466544 WDR62O43379 1518 aa23■■□□□ 1.27
RNFT1-202ENST00000466544 RUSC2Q8N2Y8 1516 aa22.97■■□□□ 1.27
RNFT1-202ENST00000466544 CUX2O14529 1486 aa22.9■■□□□ 1.26
RNFT1-202ENST00000466544 TDRD9Q8NDG6 1382 aaKnown RBP22.82■■□□□ 1.24
RNFT1-202ENST00000466544 EHMT2Q96KQ7 1210 aa22.81■■□□□ 1.24
RNFT1-202ENST00000466544 TARBP1Q13395 1621 aaKnown RBP22.81■■□□□ 1.24
RNFT1-202ENST00000466544 ABCA10Q8WWZ4 1543 aa22.8■■□□□ 1.24
RNFT1-202ENST00000466544 KIF27Q86VH2 1401 aa22.77■■□□□ 1.24
RNFT1-202ENST00000466544 IFT140Q96RY7 1462 aa22.77■■□□□ 1.24
RNFT1-202ENST00000466544 ZNF608Q9ULD9 1512 aaPredicted RBP22.76■■□□□ 1.23
RNFT1-202ENST00000466544 CSRNP3Q8WYN3 585 aa22.75■■□□□ 1.23
RNFT1-202ENST00000466544 LOC105371045A0A1W2PR82 267 aa22.75■■□□□ 1.23
RNFT1-202ENST00000466544 WDR97A6NE52 1622 aa22.74■■□□□ 1.23
RNFT1-202ENST00000466544 AQRO60306 1485 aaKnown RBP eCLIP22.73■■□□□ 1.23
RNFT1-202ENST00000466544 EEA1Q15075 1411 aa22.7■■□□□ 1.22
RNFT1-202ENST00000466544 IGF1RP08069 1367 aa22.67■■□□□ 1.22
RNFT1-202ENST00000466544 GAPVD1Q14C86 1478 aa22.66■■□□□ 1.22
RNFT1-202ENST00000466544 AEBP2Q6ZN18 517 aaPredicted RBP22.66■■□□□ 1.22
RNFT1-202ENST00000466544 ABCA5Q8WWZ7 1642 aa22.64■■□□□ 1.21
RNFT1-202ENST00000466544 EIF4G3O43432 1585 aaKnown RBP22.59■■□□□ 1.21
RNFT1-202ENST00000466544 CARMIL1Q5VZK9 1371 aa22.54■■□□□ 1.2
RNFT1-202ENST00000466544 GRIN2BQ13224 1484 aa22.53■■□□□ 1.2
RNFT1-202ENST00000466544 PBRM1Q86U86 1689 aa22.52■■□□□ 1.2
RNFT1-202ENST00000466544 PRXQ9BXM0 1461 aa22.52■■□□□ 1.2
RNFT1-202ENST00000466544 RAPGEF2Q9Y4G8 1499 aa22.52■■□□□ 1.2
RNFT1-202ENST00000466544 ERICH3Q5RHP9 1530 aa22.51■■□□□ 1.19
RNFT1-202ENST00000466544 SNAPC4Q5SXM2 1469 aa22.47■■□□□ 1.19
RNFT1-202ENST00000466544 UBTFP17480 764 aaKnown RBP22.46■■□□□ 1.19
RNFT1-202ENST00000466544 KIF21BO75037 1637 aa22.46■■□□□ 1.19
RNFT1-202ENST00000466544 GOLGA3Q08378 1498 aa22.43■■□□□ 1.18
RNFT1-202ENST00000466544 CUL7Q14999 1698 aa22.4■■□□□ 1.18
RNFT1-202ENST00000466544 FBLN2P98095 1184 aa22.39■■□□□ 1.17
RNFT1-202ENST00000466544 FHAD1B1AJZ9 1412 aa22.39■■□□□ 1.17
RNFT1-202ENST00000466544 ADAMTS12P58397 1594 aa22.38■■□□□ 1.17
RNFT1-202ENST00000466544 MAGI1Q96QZ7 1491 aaPredicted RBP22.35■■□□□ 1.17
RNFT1-202ENST00000466544 CHMP7Q8WUX9 453 aaPredicted RBP22.34■■□□□ 1.17
RNFT1-202ENST00000466544 RANGAP1P46060 587 aaPredicted RBP22.34■■□□□ 1.17
RNFT1-202ENST00000466544 TNIKQ9UKE5 1360 aa22.3■■□□□ 1.16
RNFT1-202ENST00000466544 SYNJ2O15056 1496 aa22.29■■□□□ 1.16
RNFT1-202ENST00000466544 GRIN2AQ12879 1464 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms