RNA–Protein interactions for RNA: ENST00000466382.2

ARID1A-206, Transcript of AT-rich interaction domain 1A, humanhuman

TSL 2

Gene ARID1A, Length 2,699 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID1A-206ENST00000466382 NISCHQ9Y2I1 1504 aa27.07■■□□□ 1.92
ARID1A-206ENST00000466382 CCDC180Q9P1Z9 1646 aa23.21■■□□□ 1.31
ARID1A-206ENST00000466382 ZCCHC6Q5VYS8 1495 aaKnown RBP22.78■■□□□ 1.24
ARID1A-206ENST00000466382 SHROOM4Q9ULL8 1493 aa22.63■■□□□ 1.21
ARID1A-206ENST00000466382 DCAF8L2P0C7V8 631 aa22.56■■□□□ 1.2
ARID1A-206ENST00000466382 DCAF1Q9Y4B6 1507 aa22.22■■□□□ 1.15
ARID1A-206ENST00000466382 ABCC9O60706 1549 aa22.04■■□□□ 1.12
ARID1A-206ENST00000466382 SUPT5HO00267 1087 aaKnown RBP21.95■■□□□ 1.1
ARID1A-206ENST00000466382 MYO15BQ96JP2 1530 aa21.79■■□□□ 1.08
ARID1A-206ENST00000466382 SCRIBQ14160 1630 aa21.65■■□□□ 1.06
ARID1A-206ENST00000466382 NACADO15069 1562 aa21.62■■□□□ 1.05
ARID1A-206ENST00000466382 RB1CC1Q8TDY2 1594 aa21.36■■□□□ 1.01
ARID1A-206ENST00000466382 RSF1Q96T23 1441 aaPredicted RBP21.23■□□□□ 0.99
ARID1A-206ENST00000466382 CECR2Q9BXF3 1484 aa21.16■□□□□ 0.98
ARID1A-206ENST00000466382 CHIC1Q5VXU3 224 aa21.13■□□□□ 0.97
ARID1A-206ENST00000466382 MROH2BQ7Z745 1585 aa21.02■□□□□ 0.96
ARID1A-206ENST00000466382 UNC13AQ9UPW8 1703 aa20.99■□□□□ 0.95
ARID1A-206ENST00000466382 PABPN1Q86U42 306 aaKnown RBP eCLIP20.96■□□□□ 0.95
ARID1A-206ENST00000466382 BICRAQ9NZM4 1560 aa20.84■□□□□ 0.93
ARID1A-206ENST00000466382 WIZO95785 1651 aa20.83■□□□□ 0.93
ARID1A-206ENST00000466382 BAZ1AQ9NRL2 1556 aaPredicted RBP20.8■□□□□ 0.92
ARID1A-206ENST00000466382 SMARCA4P51532 1647 aa20.69■□□□□ 0.9
ARID1A-206ENST00000466382 TOP2AP11388 1531 aaKnown RBP20.51■□□□□ 0.87
ARID1A-206ENST00000466382 TRIM41Q8WV44 630 aa20.5■□□□□ 0.87
ARID1A-206ENST00000466382 LOC105371045A0A1W2PR82 267 aa20.48■□□□□ 0.87
ARID1A-206ENST00000466382 CCDC88BA6NC98 1476 aa20.45■□□□□ 0.86
ARID1A-206ENST00000466382 SMARCA2P51531 1590 aa20.39■□□□□ 0.85
ARID1A-206ENST00000466382 PEG3Q9GZU2 1588 aa20.35■□□□□ 0.85
ARID1A-206ENST00000466382 ATAD2BQ9ULI0 1458 aa20.34■□□□□ 0.85
ARID1A-206ENST00000466382 EIF4G1Q04637 1599 aaKnown RBP20.33■□□□□ 0.84
ARID1A-206ENST00000466382 FAM9AQ8IZU1 332 aaPredicted RBP20.3■□□□□ 0.84
ARID1A-206ENST00000466382 BAZ1BQ9UIG0 1483 aaKnown RBP20.2■□□□□ 0.83
ARID1A-206ENST00000466382 ABCC8Q09428 1581 aa20.17■□□□□ 0.82
ARID1A-206ENST00000466382 EHMT2Q96KQ7 1210 aa20.11■□□□□ 0.81
ARID1A-206ENST00000466382 NCAPD3P42695 1498 aa20.06■□□□□ 0.8
ARID1A-206ENST00000466382 HMGXB3Q12766 1538 aa19.95■□□□□ 0.78
ARID1A-206ENST00000466382 WRNQ14191 1432 aaPredicted RBP eCLIP19.92■□□□□ 0.78
ARID1A-206ENST00000466382 SOGA1O94964 1423 aa19.92■□□□□ 0.78
ARID1A-206ENST00000466382 CC2D2AQ9P2K1 1620 aa19.87■□□□□ 0.77
ARID1A-206ENST00000466382 RUSC2Q8N2Y8 1516 aa19.86■□□□□ 0.77
ARID1A-206ENST00000466382 PCGF6Q9BYE7 350 aa19.86■□□□□ 0.77
ARID1A-206ENST00000466382 SYNJ1O43426 1573 aa19.83■□□□□ 0.77
ARID1A-206ENST00000466382 CSRNP3Q8WYN3 585 aa19.77■□□□□ 0.75
ARID1A-206ENST00000466382 DNAJC5BQ9UF47 199 aa19.75■□□□□ 0.75
ARID1A-206ENST00000466382 CFTRP13569 1480 aa19.73■□□□□ 0.75
ARID1A-206ENST00000466382 EEA1Q15075 1411 aa19.68■□□□□ 0.74
ARID1A-206ENST00000466382 TOP2BQ02880 1626 aa19.63■□□□□ 0.73
ARID1A-206ENST00000466382 CADPSQ9ULU8 1353 aa19.62■□□□□ 0.73
ARID1A-206ENST00000466382 TRIM26Q12899 539 aaPredicted RBP19.61■□□□□ 0.73
ARID1A-206ENST00000466382 CUX1P39880 1505 aa19.59■□□□□ 0.73
ARID1A-206ENST00000466382 UBTFP17480 764 aaKnown RBP19.59■□□□□ 0.73
ARID1A-206ENST00000466382 TNIKQ9UKE5 1360 aa19.57■□□□□ 0.72
ARID1A-206ENST00000466382 PPARGC1BQ86YN6 1023 aaKnown RBP19.55■□□□□ 0.72
ARID1A-206ENST00000466382 BIVM-ERCC5R4GMW8 1640 aa19.55■□□□□ 0.72
ARID1A-206ENST00000466382 CEP162Q5TB80 1403 aa19.53■□□□□ 0.72
ARID1A-206ENST00000466382 GOLGA3Q08378 1498 aa19.51■□□□□ 0.71
ARID1A-206ENST00000466382 HRCP23327 699 aa19.47■□□□□ 0.71
ARID1A-206ENST00000466382 CEP164Q9UPV0 1460 aa19.46■□□□□ 0.71
ARID1A-206ENST00000466382 NESP48681 1621 aa19.45■□□□□ 0.7
ARID1A-206ENST00000466382 RAPGEF2Q9Y4G8 1499 aa19.44■□□□□ 0.7
ARID1A-206ENST00000466382 KIF21BO75037 1637 aa19.42■□□□□ 0.7
ARID1A-206ENST00000466382 PRDM2Q13029 1718 aa19.4■□□□□ 0.7
ARID1A-206ENST00000466382 FANCD2Q9BXW9 1451 aa19.4■□□□□ 0.7
ARID1A-206ENST00000466382 KIF27Q86VH2 1401 aa19.35■□□□□ 0.69
ARID1A-206ENST00000466382 PRXQ9BXM0 1461 aa19.34■□□□□ 0.69
ARID1A-206ENST00000466382 RANGAP1P46060 587 aaPredicted RBP19.33■□□□□ 0.69
ARID1A-206ENST00000466382 FGD5Q6ZNL6 1462 aa19.31■□□□□ 0.68
ARID1A-206ENST00000466382 TTBK1Q5TCY1 1321 aaPredicted RBP19.3■□□□□ 0.68
ARID1A-206ENST00000466382 CLIP1P30622 1438 aa19.29■□□□□ 0.68
ARID1A-206ENST00000466382 CUX2O14529 1486 aa19.28■□□□□ 0.68
ARID1A-206ENST00000466382 IGF1RP08069 1367 aa19.26■□□□□ 0.67
ARID1A-206ENST00000466382 LAMC3Q9Y6N6 1575 aa19.22■□□□□ 0.67
ARID1A-206ENST00000466382 ERICH3Q5RHP9 1530 aa19.22■□□□□ 0.67
ARID1A-206ENST00000466382 RAD54L2Q9Y4B4 1467 aa19.21■□□□□ 0.67
ARID1A-206ENST00000466382 TOPBP1Q92547 1522 aa19.21■□□□□ 0.67
ARID1A-206ENST00000466382 PELP1Q8IZL8 1130 aaKnown RBP19.21■□□□□ 0.67
ARID1A-206ENST00000466382 DNMBPQ6XZF7 1577 aa19.19■□□□□ 0.66
ARID1A-206ENST00000466382 POLA1P09884 1462 aaPredicted RBP19.17■□□□□ 0.66
ARID1A-206ENST00000466382 URB2Q14146 1524 aaKnown RBP19.16■□□□□ 0.66
ARID1A-206ENST00000466382 PDS5BQ9NTI5 1447 aa19.14■□□□□ 0.66
ARID1A-206ENST00000466382 VPS8Q8N3P4 1428 aa19.13■□□□□ 0.65
ARID1A-206ENST00000466382 CARMIL1Q5VZK9 1371 aa19.12■□□□□ 0.65
ARID1A-206ENST00000466382 ABCA10Q8WWZ4 1543 aa19.09■□□□□ 0.65
ARID1A-206ENST00000466382 ARAP1Q96P48 1450 aa19.06■□□□□ 0.64
ARID1A-206ENST00000466382 KIF21AQ7Z4S6 1674 aa19.04■□□□□ 0.64
ARID1A-206ENST00000466382 TDRD9Q8NDG6 1382 aaKnown RBP19.03■□□□□ 0.64
ARID1A-206ENST00000466382 ARHGAP35Q9NRY4 1499 aa19■□□□□ 0.63
ARID1A-206ENST00000466382 APLP2Q06481 763 aa18.98■□□□□ 0.63
ARID1A-206ENST00000466382 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.96■□□□□ 0.63
ARID1A-206ENST00000466382 KANK4Q5T7N3 995 aaPredicted RBP18.93■□□□□ 0.62
ARID1A-206ENST00000466382 WDR97A6NE52 1622 aa18.9■□□□□ 0.62
ARID1A-206ENST00000466382 GAPVD1Q14C86 1478 aa18.89■□□□□ 0.62
ARID1A-206ENST00000466382 P3H3Q8IVL6 736 aa18.88■□□□□ 0.61
ARID1A-206ENST00000466382 ZEB1P37275 1124 aaPredicted RBP18.88■□□□□ 0.61
ARID1A-206ENST00000466382 MRC2Q9UBG0 1479 aa18.87■□□□□ 0.61
ARID1A-206ENST00000466382 TARBP1Q13395 1621 aaKnown RBP18.86■□□□□ 0.61
ARID1A-206ENST00000466382 ABCA5Q8WWZ7 1642 aa18.86■□□□□ 0.61
ARID1A-206ENST00000466382 ERCC6Q03468 1493 aa18.85■□□□□ 0.61
ARID1A-206ENST00000466382 CCER1Q8TC90 406 aaPredicted RBP18.83■□□□□ 0.6
ARID1A-206ENST00000466382 AQRO60306 1485 aaKnown RBP eCLIP18.82■□□□□ 0.64e-7■■■■■ 46.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms