RNA–Protein interactions for RNA: ENST00000466272.1

SMTN-214, Transcript of smoothelin, humanhuman

TSL 2

Gene SMTN, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-214ENST00000466272 NISCHQ9Y2I1 1504 aa26.59■■□□□ 1.85
SMTN-214ENST00000466272 CCDC180Q9P1Z9 1646 aa23.61■■□□□ 1.37
SMTN-214ENST00000466272 ABCC9O60706 1549 aa22.93■■□□□ 1.26
SMTN-214ENST00000466272 ZCCHC6Q5VYS8 1495 aaKnown RBP22.22■■□□□ 1.15
SMTN-214ENST00000466272 RB1CC1Q8TDY2 1594 aa22.09■■□□□ 1.13
SMTN-214ENST00000466272 NACADO15069 1562 aa22.08■■□□□ 1.13
SMTN-214ENST00000466272 DCAF8L2P0C7V8 631 aa22.05■■□□□ 1.12
SMTN-214ENST00000466272 DCAF1Q9Y4B6 1507 aa21.97■■□□□ 1.11
SMTN-214ENST00000466272 MYO15BQ96JP2 1530 aa21.96■■□□□ 1.11
SMTN-214ENST00000466272 UNC13AQ9UPW8 1703 aa21.74■■□□□ 1.07
SMTN-214ENST00000466272 SCRIBQ14160 1630 aa21.62■■□□□ 1.05
SMTN-214ENST00000466272 BICRAQ9NZM4 1560 aa21.49■■□□□ 1.03
SMTN-214ENST00000466272 PABPN1Q86U42 306 aaKnown RBP eCLIP21.4■■□□□ 1.02
SMTN-214ENST00000466272 SHROOM4Q9ULL8 1493 aa21.17■□□□□ 0.98
SMTN-214ENST00000466272 EIF4G1Q04637 1599 aaKnown RBP20.89■□□□□ 0.93
SMTN-214ENST00000466272 DNAJC5BQ9UF47 199 aa20.83■□□□□ 0.93
SMTN-214ENST00000466272 CC2D2AQ9P2K1 1620 aa20.77■□□□□ 0.92
SMTN-214ENST00000466272 CECR2Q9BXF3 1484 aa20.73■□□□□ 0.91
SMTN-214ENST00000466272 SMARCA4P51532 1647 aa20.65■□□□□ 0.9
SMTN-214ENST00000466272 BAZ1AQ9NRL2 1556 aaPredicted RBP20.59■□□□□ 0.89
SMTN-214ENST00000466272 MROH2BQ7Z745 1585 aa20.54■□□□□ 0.88
SMTN-214ENST00000466272 ATAD2BQ9ULI0 1458 aa20.43■□□□□ 0.86
SMTN-214ENST00000466272 SMARCA2P51531 1590 aa20.41■□□□□ 0.86
SMTN-214ENST00000466272 PEG3Q9GZU2 1588 aa20.4■□□□□ 0.86
SMTN-214ENST00000466272 WIZO95785 1651 aa20.36■□□□□ 0.85
SMTN-214ENST00000466272 HMGXB3Q12766 1538 aa20.34■□□□□ 0.85
SMTN-214ENST00000466272 NCAPD3P42695 1498 aa20.34■□□□□ 0.85
SMTN-214ENST00000466272 RSF1Q96T23 1441 aaPredicted RBP20.31■□□□□ 0.84
SMTN-214ENST00000466272 BAZ1BQ9UIG0 1483 aaKnown RBP20.29■□□□□ 0.84
SMTN-214ENST00000466272 TOP2AP11388 1531 aaKnown RBP20.12■□□□□ 0.81
SMTN-214ENST00000466272 NESP48681 1621 aa19.92■□□□□ 0.78
SMTN-214ENST00000466272 SUPT5HO00267 1087 aaKnown RBP19.89■□□□□ 0.77
SMTN-214ENST00000466272 CCDC88BA6NC98 1476 aa19.84■□□□□ 0.77
SMTN-214ENST00000466272 LAMC3Q9Y6N6 1575 aa19.83■□□□□ 0.77
SMTN-214ENST00000466272 CADPSQ9ULU8 1353 aa19.76■□□□□ 0.75
SMTN-214ENST00000466272 KIF21AQ7Z4S6 1674 aa19.75■□□□□ 0.75
SMTN-214ENST00000466272 CFTRP13569 1480 aa19.71■□□□□ 0.75
SMTN-214ENST00000466272 ERCC6Q03468 1493 aa19.71■□□□□ 0.75
SMTN-214ENST00000466272 PRDM2Q13029 1718 aa19.71■□□□□ 0.75
SMTN-214ENST00000466272 PDS5BQ9NTI5 1447 aa19.63■□□□□ 0.73
SMTN-214ENST00000466272 THOC2Q8NI27 1593 aaKnown RBP19.62■□□□□ 0.73
SMTN-214ENST00000466272 FANCD2Q9BXW9 1451 aa19.59■□□□□ 0.73
SMTN-214ENST00000466272 CEP164Q9UPV0 1460 aa19.55■□□□□ 0.72
SMTN-214ENST00000466272 MRC2Q9UBG0 1479 aa19.49■□□□□ 0.71
SMTN-214ENST00000466272 WDR62O43379 1518 aa19.46■□□□□ 0.71
SMTN-214ENST00000466272 URB2Q14146 1524 aaKnown RBP19.43■□□□□ 0.7
SMTN-214ENST00000466272 CUX2O14529 1486 aa19.42■□□□□ 0.7
SMTN-214ENST00000466272 DNMBPQ6XZF7 1577 aa19.32■□□□□ 0.68
SMTN-214ENST00000466272 TOPBP1Q92547 1522 aa19.31■□□□□ 0.68
SMTN-214ENST00000466272 CUX1P39880 1505 aa19.27■□□□□ 0.68
SMTN-214ENST00000466272 ABCC8Q09428 1581 aa19.26■□□□□ 0.67
SMTN-214ENST00000466272 SYNJ1O43426 1573 aa19.19■□□□□ 0.66
SMTN-214ENST00000466272 POLA1P09884 1462 aaPredicted RBP19.16■□□□□ 0.66
SMTN-214ENST00000466272 FGD5Q6ZNL6 1462 aa19.16■□□□□ 0.66
SMTN-214ENST00000466272 BIVM-ERCC5R4GMW8 1640 aa19.15■□□□□ 0.66
SMTN-214ENST00000466272 WRNQ14191 1432 aaPredicted RBP eCLIP19.14■□□□□ 0.65
SMTN-214ENST00000466272 TOP2BQ02880 1626 aa19.13■□□□□ 0.65
SMTN-214ENST00000466272 TARBP1Q13395 1621 aaKnown RBP19.13■□□□□ 0.65
SMTN-214ENST00000466272 IFT140Q96RY7 1462 aa19.1■□□□□ 0.65
SMTN-214ENST00000466272 RAD54L2Q9Y4B4 1467 aa19.09■□□□□ 0.65
SMTN-214ENST00000466272 WDR97A6NE52 1622 aa19.07■□□□□ 0.64
SMTN-214ENST00000466272 ZNF608Q9ULD9 1512 aaPredicted RBP19.07■□□□□ 0.64
SMTN-214ENST00000466272 EIF4G3O43432 1585 aaKnown RBP19.06■□□□□ 0.64
SMTN-214ENST00000466272 SOGA1O94964 1423 aa19.01■□□□□ 0.63
SMTN-214ENST00000466272 AQRO60306 1485 aaKnown RBP eCLIP18.95■□□□□ 0.623e-9■■■■■ 49.9
SMTN-214ENST00000466272 ABCA10Q8WWZ4 1543 aa18.95■□□□□ 0.62
SMTN-214ENST00000466272 ABCA5Q8WWZ7 1642 aa18.92■□□□□ 0.62
SMTN-214ENST00000466272 TDRD9Q8NDG6 1382 aaKnown RBP18.92■□□□□ 0.62
SMTN-214ENST00000466272 PBRM1Q86U86 1689 aa18.91■□□□□ 0.62
SMTN-214ENST00000466272 GAPVD1Q14C86 1478 aa18.84■□□□□ 0.61
SMTN-214ENST00000466272 SNAPC4Q5SXM2 1469 aa18.82■□□□□ 0.6
SMTN-214ENST00000466272 CHD1O14646 1710 aa18.8■□□□□ 0.6
SMTN-214ENST00000466272 GRIN2BQ13224 1484 aa18.8■□□□□ 0.6
SMTN-214ENST00000466272 ADAMTS12P58397 1594 aa18.75■□□□□ 0.59
SMTN-214ENST00000466272 MAGI1Q96QZ7 1491 aaPredicted RBP18.73■□□□□ 0.59
SMTN-214ENST00000466272 ERICH3Q5RHP9 1530 aa18.71■□□□□ 0.59
SMTN-214ENST00000466272 TRIM41Q8WV44 630 aa18.71■□□□□ 0.59
SMTN-214ENST00000466272 KIF27Q86VH2 1401 aa18.69■□□□□ 0.58
SMTN-214ENST00000466272 RUSC2Q8N2Y8 1516 aa18.68■□□□□ 0.58
SMTN-214ENST00000466272 SYNJ2O15056 1496 aa18.66■□□□□ 0.58
SMTN-214ENST00000466272 CHIC1Q5VXU3 224 aa18.65■□□□□ 0.58
SMTN-214ENST00000466272 FBLN2P98095 1184 aa18.62■□□□□ 0.57
SMTN-214ENST00000466272 CUL7Q14999 1698 aa18.62■□□□□ 0.57
SMTN-214ENST00000466272 FHAD1B1AJZ9 1412 aa18.6■□□□□ 0.57
SMTN-214ENST00000466272 GRIN2AQ12879 1464 aa18.59■□□□□ 0.57
SMTN-214ENST00000466272 IGF1RP08069 1367 aa18.58■□□□□ 0.57
SMTN-214ENST00000466272 CHMP7Q8WUX9 453 aaPredicted RBP18.56■□□□□ 0.56
SMTN-214ENST00000466272 CEP170Q5SW79 1584 aa18.55■□□□□ 0.56
SMTN-214ENST00000466272 CLASP1Q7Z460 1538 aa18.55■□□□□ 0.56
SMTN-214ENST00000466272 OSCARQ8IYS5 282 aa18.54■□□□□ 0.56
SMTN-214ENST00000466272 DNAJC5Q9H3Z4 198 aa18.53■□□□□ 0.56
SMTN-214ENST00000466272 NUP160Q12769 1436 aa18.49■□□□□ 0.55
SMTN-214ENST00000466272 CARMIL1Q5VZK9 1371 aa18.48■□□□□ 0.55
SMTN-214ENST00000466272 RIMBP3CA6NJZ7 1639 aa18.42■□□□□ 0.54
SMTN-214ENST00000466272 RIMBP3BA6NNM3 1639 aa18.42■□□□□ 0.54
SMTN-214ENST00000466272 RIMBP3Q9UFD9 1639 aa18.42■□□□□ 0.54
SMTN-214ENST00000466272 EEA1Q15075 1411 aa18.42■□□□□ 0.54
SMTN-214ENST00000466272 RAPGEF2Q9Y4G8 1499 aa18.42■□□□□ 0.54
SMTN-214ENST00000466272 PRXQ9BXM0 1461 aa18.41■□□□□ 0.54
SMTN-214ENST00000466272 FAM9AQ8IZU1 332 aaPredicted RBP18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms