RNA–Protein interactions for RNA: ENST00000465378.5

TRMU-209, Transcript of tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase, humanhuman

TSL 4

Gene TRMU, Length 610 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRMU-209ENST00000465378 NISCHQ9Y2I1 1504 aa40.27■■■■■ 4.04
TRMU-209ENST00000465378 CCDC180Q9P1Z9 1646 aa35.6■■■■□ 3.29
TRMU-209ENST00000465378 ABCC9O60706 1549 aa34.44■■■■□ 3.1
TRMU-209ENST00000465378 ZCCHC6Q5VYS8 1495 aaKnown RBP33.65■■■□□ 2.98
TRMU-209ENST00000465378 DCAF8L2P0C7V8 631 aa33.47■■■□□ 2.95
TRMU-209ENST00000465378 NACADO15069 1562 aa33.34■■■□□ 2.93
TRMU-209ENST00000465378 DCAF1Q9Y4B6 1507 aa33.33■■■□□ 2.93
TRMU-209ENST00000465378 MYO15BQ96JP2 1530 aa33.28■■■□□ 2.92
TRMU-209ENST00000465378 DNAJC5BQ9UF47 199 aa33.26■■■□□ 2.91
TRMU-209ENST00000465378 RB1CC1Q8TDY2 1594 aa33.26■■■□□ 2.91
TRMU-209ENST00000465378 UNC13AQ9UPW8 1703 aa32.57■■■□□ 2.81
TRMU-209ENST00000465378 SCRIBQ14160 1630 aa32.53■■■□□ 2.8
TRMU-209ENST00000465378 BICRAQ9NZM4 1560 aa32.23■■■□□ 2.75
TRMU-209ENST00000465378 PABPN1Q86U42 306 aaKnown RBP eCLIP32.17■■■□□ 2.74
TRMU-209ENST00000465378 SHROOM4Q9ULL8 1493 aa32.14■■■□□ 2.74
TRMU-209ENST00000465378 DNAJC5Q9H3Z4 198 aa31.5■■■□□ 2.63
TRMU-209ENST00000465378 EIF4G1Q04637 1599 aaKnown RBP31.33■■■□□ 2.61
TRMU-209ENST00000465378 CECR2Q9BXF3 1484 aa31.33■■■□□ 2.61
TRMU-209ENST00000465378 BAZ1AQ9NRL2 1556 aaPredicted RBP31.18■■■□□ 2.58
TRMU-209ENST00000465378 SMARCA4P51532 1647 aa31.16■■■□□ 2.58
TRMU-209ENST00000465378 CC2D2AQ9P2K1 1620 aa31.1■■■□□ 2.57
TRMU-209ENST00000465378 MROH2BQ7Z745 1585 aa31.05■■■□□ 2.56
TRMU-209ENST00000465378 RSF1Q96T23 1441 aaPredicted RBP30.87■■■□□ 2.53
TRMU-209ENST00000465378 SMARCA2P51531 1590 aa30.84■■■□□ 2.53
TRMU-209ENST00000465378 ATAD2BQ9ULI0 1458 aa30.84■■■□□ 2.53
TRMU-209ENST00000465378 PEG3Q9GZU2 1588 aa30.83■■■□□ 2.53
TRMU-209ENST00000465378 WIZO95785 1651 aa30.78■■■□□ 2.52
TRMU-209ENST00000465378 NCAPD3P42695 1498 aa30.74■■■□□ 2.51
TRMU-209ENST00000465378 HMGXB3Q12766 1538 aa30.64■■■□□ 2.5
TRMU-209ENST00000465378 BAZ1BQ9UIG0 1483 aaKnown RBP30.62■■■□□ 2.49
TRMU-209ENST00000465378 SUPT5HO00267 1087 aaKnown RBP30.5■■■□□ 2.47
TRMU-209ENST00000465378 TOP2AP11388 1531 aaKnown RBP30.45■■■□□ 2.47
TRMU-209ENST00000465378 CUX2O14529 1486 aa30.19■■■□□ 2.42
TRMU-209ENST00000465378 CCDC88BA6NC98 1476 aa30.09■■■□□ 2.41
TRMU-209ENST00000465378 ERCC6Q03468 1493 aa29.89■■■□□ 2.38
TRMU-209ENST00000465378 CADPSQ9ULU8 1353 aa29.88■■■□□ 2.37
TRMU-209ENST00000465378 NESP48681 1621 aa29.87■■■□□ 2.37
TRMU-209ENST00000465378 LAMC3Q9Y6N6 1575 aa29.86■■■□□ 2.37
TRMU-209ENST00000465378 CFTRP13569 1480 aa29.8■■■□□ 2.36
TRMU-209ENST00000465378 PRDM2Q13029 1718 aa29.7■■■□□ 2.34
TRMU-209ENST00000465378 TRIM41Q8WV44 630 aa29.68■■■□□ 2.34
TRMU-209ENST00000465378 PDS5BQ9NTI5 1447 aa29.63■■■□□ 2.33
TRMU-209ENST00000465378 KIF21AQ7Z4S6 1674 aa29.56■■■□□ 2.32
TRMU-209ENST00000465378 FANCD2Q9BXW9 1451 aa29.54■■■□□ 2.32
TRMU-209ENST00000465378 CEP164Q9UPV0 1460 aa29.45■■■□□ 2.31
TRMU-209ENST00000465378 THOC2Q8NI27 1593 aaKnown RBP29.31■■■□□ 2.28
TRMU-209ENST00000465378 MRC2Q9UBG0 1479 aa29.3■■■□□ 2.28
TRMU-209ENST00000465378 URB2Q14146 1524 aaKnown RBP29.21■■■□□ 2.27
TRMU-209ENST00000465378 WDR62O43379 1518 aa29.2■■■□□ 2.26
TRMU-209ENST00000465378 ABCC8Q09428 1581 aa29.16■■■□□ 2.26
TRMU-209ENST00000465378 DNMBPQ6XZF7 1577 aa29.14■■■□□ 2.26
TRMU-209ENST00000465378 TOPBP1Q92547 1522 aa29.14■■■□□ 2.25
TRMU-209ENST00000465378 CUX1P39880 1505 aa29.1■■■□□ 2.25
TRMU-209ENST00000465378 WRNQ14191 1432 aaPredicted RBP eCLIP29.1■■■□□ 2.25
TRMU-209ENST00000465378 SYNJ1O43426 1573 aa29.01■■■□□ 2.24
TRMU-209ENST00000465378 BIVM-ERCC5R4GMW8 1640 aa29■■■□□ 2.23
TRMU-209ENST00000465378 TOP2BQ02880 1626 aa28.99■■■□□ 2.23
TRMU-209ENST00000465378 FGD5Q6ZNL6 1462 aa28.92■■■□□ 2.22
TRMU-209ENST00000465378 POLA1P09884 1462 aaPredicted RBP28.91■■■□□ 2.22
TRMU-209ENST00000465378 IFT140Q96RY7 1462 aa28.82■■■□□ 2.2
TRMU-209ENST00000465378 SOGA1O94964 1423 aa28.81■■■□□ 2.2
TRMU-209ENST00000465378 RAD54L2Q9Y4B4 1467 aa28.79■■■□□ 2.2
TRMU-209ENST00000465378 TARBP1Q13395 1621 aaKnown RBP28.78■■■□□ 2.2
TRMU-209ENST00000465378 CHIC1Q5VXU3 224 aa28.76■■■□□ 2.19
TRMU-209ENST00000465378 OSCARQ8IYS5 282 aa28.71■■■□□ 2.19
TRMU-209ENST00000465378 WDR97A6NE52 1622 aa28.69■■■□□ 2.18
TRMU-209ENST00000465378 ABCA10Q8WWZ4 1543 aa28.67■■■□□ 2.18
TRMU-209ENST00000465378 ZNF608Q9ULD9 1512 aaPredicted RBP28.64■■■□□ 2.18
TRMU-209ENST00000465378 TDRD9Q8NDG6 1382 aaKnown RBP28.58■■■□□ 2.17
TRMU-209ENST00000465378 EIF4G3O43432 1585 aaKnown RBP28.56■■■□□ 2.16
TRMU-209ENST00000465378 AQRO60306 1485 aaKnown RBP eCLIP28.55■■■□□ 2.163e-7■■□□□ 11.9
TRMU-209ENST00000465378 ABCA5Q8WWZ7 1642 aa28.52■■■□□ 2.16
TRMU-209ENST00000465378 GAPVD1Q14C86 1478 aa28.48■■■□□ 2.15
TRMU-209ENST00000465378 KIF27Q86VH2 1401 aa28.45■■■□□ 2.15
TRMU-209ENST00000465378 PBRM1Q86U86 1689 aa28.44■■■□□ 2.14
TRMU-209ENST00000465378 GRIN2BQ13224 1484 aa28.4■■■□□ 2.14
TRMU-209ENST00000465378 RUSC2Q8N2Y8 1516 aa28.36■■■□□ 2.13
TRMU-209ENST00000465378 ERICH3Q5RHP9 1530 aa28.33■■■□□ 2.13
TRMU-209ENST00000465378 RIMBP3CA6NJZ7 1639 aa28.32■■■□□ 2.12
TRMU-209ENST00000465378 RIMBP3BA6NNM3 1639 aa28.32■■■□□ 2.12
TRMU-209ENST00000465378 RIMBP3Q9UFD9 1639 aa28.32■■■□□ 2.12
TRMU-209ENST00000465378 SNAPC4Q5SXM2 1469 aa28.3■■■□□ 2.12
TRMU-209ENST00000465378 AEBP2Q6ZN18 517 aaPredicted RBP28.29■■■□□ 2.12
TRMU-209ENST00000465378 MAGI1Q96QZ7 1491 aaPredicted RBP28.27■■■□□ 2.12
TRMU-209ENST00000465378 IGF1RP08069 1367 aa28.27■■■□□ 2.12
TRMU-209ENST00000465378 EEA1Q15075 1411 aa28.24■■■□□ 2.11
TRMU-209ENST00000465378 TRHP20396 242 aaPredicted RBP28.21■■■□□ 2.11
TRMU-209ENST00000465378 ADAMTS12P58397 1594 aa28.2■■■□□ 2.11
TRMU-209ENST00000465378 CUL7Q14999 1698 aa28.19■■■□□ 2.1
TRMU-209ENST00000465378 FAM9AQ8IZU1 332 aaPredicted RBP28.17■■■□□ 2.1
TRMU-209ENST00000465378 FHAD1B1AJZ9 1412 aa28.17■■■□□ 2.1
TRMU-209ENST00000465378 SYNJ2O15056 1496 aa28.15■■■□□ 2.1
TRMU-209ENST00000465378 CHD1O14646 1710 aa28.15■■■□□ 2.1
TRMU-209ENST00000465378 CSRNP3Q8WYN3 585 aa28.14■■■□□ 2.1
TRMU-209ENST00000465378 CARMIL1Q5VZK9 1371 aa28.13■■■□□ 2.09
TRMU-209ENST00000465378 ARHGEF11O15085 1522 aa28.13■■■□□ 2.09
TRMU-209ENST00000465378 FBLN2P98095 1184 aa28.12■■■□□ 2.09
TRMU-209ENST00000465378 CHMP7Q8WUX9 453 aaPredicted RBP28.12■■■□□ 2.09
TRMU-209ENST00000465378 CYB5RLQ6IPT4 315 aa28.09■■■□□ 2.09
TRMU-209ENST00000465378 GRIN2AQ12879 1464 aa28.04■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms