RNA–Protein interactions for RNA: ENST00000465231.1

CLCN2-206, Transcript of chloride voltage-gated channel 2, humanhuman

TSL 2

Gene CLCN2, Length 601 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-206ENST00000465231 NISCHQ9Y2I1 1504 aa28.73■■■□□ 2.19
CLCN2-206ENST00000465231 CCDC180Q9P1Z9 1646 aa25.48■■□□□ 1.67
CLCN2-206ENST00000465231 ABCC9O60706 1549 aa24.81■■□□□ 1.56
CLCN2-206ENST00000465231 DCAF8L2P0C7V8 631 aa23.98■■□□□ 1.43
CLCN2-206ENST00000465231 ZCCHC6Q5VYS8 1495 aaKnown RBP23.97■■□□□ 1.43
CLCN2-206ENST00000465231 RB1CC1Q8TDY2 1594 aa23.89■■□□□ 1.41
CLCN2-206ENST00000465231 NACADO15069 1562 aa23.88■■□□□ 1.41
CLCN2-206ENST00000465231 MYO15BQ96JP2 1530 aa23.74■■□□□ 1.39
CLCN2-206ENST00000465231 DCAF1Q9Y4B6 1507 aa23.72■■□□□ 1.39
CLCN2-206ENST00000465231 UNC13AQ9UPW8 1703 aa23.48■■□□□ 1.35
CLCN2-206ENST00000465231 SCRIBQ14160 1630 aa23.33■■□□□ 1.32
CLCN2-206ENST00000465231 PABPN1Q86U42 306 aaKnown RBP eCLIP23.21■■□□□ 1.31
CLCN2-206ENST00000465231 BICRAQ9NZM4 1560 aa23.21■■□□□ 1.31
CLCN2-206ENST00000465231 SHROOM4Q9ULL8 1493 aa22.88■■□□□ 1.25
CLCN2-206ENST00000465231 DNAJC5BQ9UF47 199 aa22.62■■□□□ 1.21
CLCN2-206ENST00000465231 EIF4G1Q04637 1599 aaKnown RBP22.56■■□□□ 1.2
CLCN2-206ENST00000465231 CC2D2AQ9P2K1 1620 aa22.46■■□□□ 1.19
CLCN2-206ENST00000465231 CECR2Q9BXF3 1484 aa22.41■■□□□ 1.18
CLCN2-206ENST00000465231 SMARCA4P51532 1647 aa22.29■■□□□ 1.16
CLCN2-206ENST00000465231 BAZ1AQ9NRL2 1556 aaPredicted RBP22.25■■□□□ 1.15
CLCN2-206ENST00000465231 MROH2BQ7Z745 1585 aa22.19■■□□□ 1.14
CLCN2-206ENST00000465231 ATAD2BQ9ULI0 1458 aa22.09■■□□□ 1.13
CLCN2-206ENST00000465231 SMARCA2P51531 1590 aa22.05■■□□□ 1.12
CLCN2-206ENST00000465231 PEG3Q9GZU2 1588 aa22.02■■□□□ 1.12
CLCN2-206ENST00000465231 NCAPD3P42695 1498 aa22.02■■□□□ 1.12
CLCN2-206ENST00000465231 WIZO95785 1651 aa22■■□□□ 1.11
CLCN2-206ENST00000465231 RSF1Q96T23 1441 aaPredicted RBP21.95■■□□□ 1.1
CLCN2-206ENST00000465231 HMGXB3Q12766 1538 aa21.95■■□□□ 1.1
CLCN2-206ENST00000465231 BAZ1BQ9UIG0 1483 aaKnown RBP21.93■■□□□ 1.1
CLCN2-206ENST00000465231 TOP2AP11388 1531 aaKnown RBP21.7■■□□□ 1.07
CLCN2-206ENST00000465231 SUPT5HO00267 1087 aaKnown RBP21.56■■□□□ 1.04
CLCN2-206ENST00000465231 NESP48681 1621 aa21.54■■□□□ 1.04
CLCN2-206ENST00000465231 CCDC88BA6NC98 1476 aa21.45■■□□□ 1.03
CLCN2-206ENST00000465231 LAMC3Q9Y6N6 1575 aa21.44■■□□□ 1.02
CLCN2-206ENST00000465231 CADPSQ9ULU8 1353 aa21.39■■□□□ 1.02
CLCN2-206ENST00000465231 ERCC6Q03468 1493 aa21.33■■□□□ 1.01
CLCN2-206ENST00000465231 KIF21AQ7Z4S6 1674 aa21.32■■□□□ 1
CLCN2-206ENST00000465231 CFTRP13569 1480 aa21.31■■□□□ 1
CLCN2-206ENST00000465231 PRDM2Q13029 1718 aa21.26■□□□□ 0.99
CLCN2-206ENST00000465231 PDS5BQ9NTI5 1447 aa21.25■□□□□ 0.99
CLCN2-206ENST00000465231 FANCD2Q9BXW9 1451 aa21.19■□□□□ 0.98
CLCN2-206ENST00000465231 THOC2Q8NI27 1593 aaKnown RBP21.17■□□□□ 0.98
CLCN2-206ENST00000465231 CEP164Q9UPV0 1460 aa21.14■□□□□ 0.98
CLCN2-206ENST00000465231 MRC2Q9UBG0 1479 aa21.07■□□□□ 0.96
CLCN2-206ENST00000465231 CUX2O14529 1486 aa21.01■□□□□ 0.95
CLCN2-206ENST00000465231 WDR62O43379 1518 aa21■□□□□ 0.95
CLCN2-206ENST00000465231 URB2Q14146 1524 aaKnown RBP20.99■□□□□ 0.95
CLCN2-206ENST00000465231 TOPBP1Q92547 1522 aa20.88■□□□□ 0.93
CLCN2-206ENST00000465231 DNMBPQ6XZF7 1577 aa20.86■□□□□ 0.93
CLCN2-206ENST00000465231 ABCC8Q09428 1581 aa20.8■□□□□ 0.92
CLCN2-206ENST00000465231 CUX1P39880 1505 aa20.8■□□□□ 0.92
CLCN2-206ENST00000465231 POLA1P09884 1462 aaPredicted RBP20.7■□□□□ 0.9
CLCN2-206ENST00000465231 FGD5Q6ZNL6 1462 aa20.69■□□□□ 0.9
CLCN2-206ENST00000465231 SYNJ1O43426 1573 aa20.69■□□□□ 0.9
CLCN2-206ENST00000465231 WRNQ14191 1432 aaPredicted RBP eCLIP20.69■□□□□ 0.9
CLCN2-206ENST00000465231 BIVM-ERCC5R4GMW8 1640 aa20.67■□□□□ 0.9
CLCN2-206ENST00000465231 IFT140Q96RY7 1462 aa20.66■□□□□ 0.9
CLCN2-206ENST00000465231 TARBP1Q13395 1621 aaKnown RBP20.65■□□□□ 0.9
CLCN2-206ENST00000465231 RAD54L2Q9Y4B4 1467 aa20.65■□□□□ 0.9
CLCN2-206ENST00000465231 TOP2BQ02880 1626 aa20.64■□□□□ 0.9
CLCN2-206ENST00000465231 ZNF608Q9ULD9 1512 aaPredicted RBP20.62■□□□□ 0.89
CLCN2-206ENST00000465231 SOGA1O94964 1423 aa20.61■□□□□ 0.89
CLCN2-206ENST00000465231 WDR97A6NE52 1622 aa20.56■□□□□ 0.88
CLCN2-206ENST00000465231 EIF4G3O43432 1585 aaKnown RBP20.55■□□□□ 0.88
CLCN2-206ENST00000465231 AQRO60306 1485 aaKnown RBP eCLIP20.51■□□□□ 0.87
CLCN2-206ENST00000465231 TDRD9Q8NDG6 1382 aaKnown RBP20.49■□□□□ 0.87
CLCN2-206ENST00000465231 ABCA10Q8WWZ4 1543 aa20.47■□□□□ 0.87
CLCN2-206ENST00000465231 ABCA5Q8WWZ7 1642 aa20.42■□□□□ 0.86
CLCN2-206ENST00000465231 PBRM1Q86U86 1689 aa20.41■□□□□ 0.86
CLCN2-206ENST00000465231 GAPVD1Q14C86 1478 aa20.37■□□□□ 0.85
CLCN2-206ENST00000465231 GRIN2BQ13224 1484 aa20.33■□□□□ 0.85
CLCN2-206ENST00000465231 SNAPC4Q5SXM2 1469 aa20.33■□□□□ 0.85
CLCN2-206ENST00000465231 CHD1O14646 1710 aa20.31■□□□□ 0.84
CLCN2-206ENST00000465231 TRIM41Q8WV44 630 aa20.3■□□□□ 0.84
CLCN2-206ENST00000465231 MAGI1Q96QZ7 1491 aaPredicted RBP20.25■□□□□ 0.83
CLCN2-206ENST00000465231 KIF27Q86VH2 1401 aa20.22■□□□□ 0.83
CLCN2-206ENST00000465231 FBLN2P98095 1184 aa20.22■□□□□ 0.83
CLCN2-206ENST00000465231 ERICH3Q5RHP9 1530 aa20.22■□□□□ 0.83
CLCN2-206ENST00000465231 ADAMTS12P58397 1594 aa20.21■□□□□ 0.83
CLCN2-206ENST00000465231 RUSC2Q8N2Y8 1516 aa20.19■□□□□ 0.82
CLCN2-206ENST00000465231 CHIC1Q5VXU3 224 aa20.19■□□□□ 0.82
CLCN2-206ENST00000465231 SYNJ2O15056 1496 aa20.18■□□□□ 0.82
CLCN2-206ENST00000465231 DNAJC5Q9H3Z4 198 aa20.17■□□□□ 0.82
CLCN2-206ENST00000465231 OSCARQ8IYS5 282 aa20.16■□□□□ 0.82
CLCN2-206ENST00000465231 CHMP7Q8WUX9 453 aaPredicted RBP20.15■□□□□ 0.82
CLCN2-206ENST00000465231 FHAD1B1AJZ9 1412 aa20.12■□□□□ 0.81
CLCN2-206ENST00000465231 IGF1RP08069 1367 aa20.12■□□□□ 0.81
CLCN2-206ENST00000465231 GRIN2AQ12879 1464 aa20.1■□□□□ 0.81
CLCN2-206ENST00000465231 CUL7Q14999 1698 aa20.1■□□□□ 0.81
CLCN2-206ENST00000465231 CEP170Q5SW79 1584 aa20.03■□□□□ 0.8
CLCN2-206ENST00000465231 CLASP1Q7Z460 1538 aa20.02■□□□□ 0.8
CLCN2-206ENST00000465231 CARMIL1Q5VZK9 1371 aa20.02■□□□□ 0.8
CLCN2-206ENST00000465231 NUP160Q12769 1436 aa19.98■□□□□ 0.79
CLCN2-206ENST00000465231 FAM9AQ8IZU1 332 aaPredicted RBP19.97■□□□□ 0.79
CLCN2-206ENST00000465231 EEA1Q15075 1411 aa19.92■□□□□ 0.78
CLCN2-206ENST00000465231 RAPGEF2Q9Y4G8 1499 aa19.92■□□□□ 0.78
CLCN2-206ENST00000465231 RIMBP3CA6NJZ7 1639 aa19.91■□□□□ 0.78
CLCN2-206ENST00000465231 RIMBP3BA6NNM3 1639 aa19.91■□□□□ 0.78
CLCN2-206ENST00000465231 RIMBP3Q9UFD9 1639 aa19.91■□□□□ 0.78
CLCN2-206ENST00000465231 CSRNP3Q8WYN3 585 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms