RNA–Protein interactions for RNA: ENST00000465045.5

PHF11-206, Transcript of PHD finger protein 11, humanhuman

TSL 1 (best)

Gene PHF11, Length 1,626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF11-206ENST00000465045 NISCHQ9Y2I1 1504 aa26.47■■□□□ 1.83
PHF11-206ENST00000465045 CCDC180Q9P1Z9 1646 aa23.5■■□□□ 1.35
PHF11-206ENST00000465045 ABCC9O60706 1549 aa22.85■■□□□ 1.25
PHF11-206ENST00000465045 ZCCHC6Q5VYS8 1495 aaKnown RBP22.11■■□□□ 1.13
PHF11-206ENST00000465045 DCAF8L2P0C7V8 631 aa22.05■■□□□ 1.12
PHF11-206ENST00000465045 RB1CC1Q8TDY2 1594 aa22.02■■□□□ 1.12
PHF11-206ENST00000465045 NACADO15069 1562 aa22■■□□□ 1.11
PHF11-206ENST00000465045 MYO15BQ96JP2 1530 aa21.88■■□□□ 1.09
PHF11-206ENST00000465045 DCAF1Q9Y4B6 1507 aa21.86■■□□□ 1.09
PHF11-206ENST00000465045 UNC13AQ9UPW8 1703 aa21.64■■□□□ 1.05
PHF11-206ENST00000465045 SCRIBQ14160 1630 aa21.52■■□□□ 1.04
PHF11-206ENST00000465045 BICRAQ9NZM4 1560 aa21.38■■□□□ 1.01
PHF11-206ENST00000465045 PABPN1Q86U42 306 aaKnown RBP eCLIP21.35■■□□□ 1.01
PHF11-206ENST00000465045 SHROOM4Q9ULL8 1493 aa21.09■□□□□ 0.97
PHF11-206ENST00000465045 EIF4G1Q04637 1599 aaKnown RBP20.8■□□□□ 0.92
PHF11-206ENST00000465045 DNAJC5BQ9UF47 199 aa20.77■□□□□ 0.92
PHF11-206ENST00000465045 CC2D2AQ9P2K1 1620 aa20.68■□□□□ 0.9
PHF11-206ENST00000465045 CECR2Q9BXF3 1484 aa20.63■□□□□ 0.89
PHF11-206ENST00000465045 SMARCA4P51532 1647 aa20.56■□□□□ 0.88
PHF11-206ENST00000465045 BAZ1AQ9NRL2 1556 aaPredicted RBP20.52■□□□□ 0.87
PHF11-206ENST00000465045 MROH2BQ7Z745 1585 aa20.44■□□□□ 0.86
PHF11-206ENST00000465045 ATAD2BQ9ULI0 1458 aa20.35■□□□□ 0.85
PHF11-206ENST00000465045 SMARCA2P51531 1590 aa20.34■□□□□ 0.85
PHF11-206ENST00000465045 PEG3Q9GZU2 1588 aa20.29■□□□□ 0.84
PHF11-206ENST00000465045 WIZO95785 1651 aa20.27■□□□□ 0.84
PHF11-206ENST00000465045 NCAPD3P42695 1498 aa20.27■□□□□ 0.83
PHF11-206ENST00000465045 HMGXB3Q12766 1538 aa20.24■□□□□ 0.83
PHF11-206ENST00000465045 RSF1Q96T23 1441 aaPredicted RBP20.22■□□□□ 0.83
PHF11-206ENST00000465045 BAZ1BQ9UIG0 1483 aaKnown RBP20.22■□□□□ 0.83
PHF11-206ENST00000465045 TOP2AP11388 1531 aaKnown RBP20.02■□□□□ 0.8
PHF11-206ENST00000465045 SUPT5HO00267 1087 aaKnown RBP19.85■□□□□ 0.77
PHF11-206ENST00000465045 NESP48681 1621 aa19.84■□□□□ 0.77
PHF11-206ENST00000465045 LAMC3Q9Y6N6 1575 aa19.77■□□□□ 0.75
PHF11-206ENST00000465045 CCDC88BA6NC98 1476 aa19.76■□□□□ 0.75
PHF11-206ENST00000465045 CADPSQ9ULU8 1353 aa19.69■□□□□ 0.74
PHF11-206ENST00000465045 ERCC6Q03468 1493 aa19.68■□□□□ 0.74
PHF11-206ENST00000465045 KIF21AQ7Z4S6 1674 aa19.66■□□□□ 0.74
PHF11-206ENST00000465045 CFTRP13569 1480 aa19.63■□□□□ 0.73
PHF11-206ENST00000465045 PRDM2Q13029 1718 aa19.61■□□□□ 0.73
PHF11-206ENST00000465045 PDS5BQ9NTI5 1447 aa19.58■□□□□ 0.72
PHF11-206ENST00000465045 FANCD2Q9BXW9 1451 aa19.52■□□□□ 0.72
PHF11-206ENST00000465045 THOC2Q8NI27 1593 aaKnown RBP19.52■□□□□ 0.72
PHF11-206ENST00000465045 CEP164Q9UPV0 1460 aa19.49■□□□□ 0.71
PHF11-206ENST00000465045 MRC2Q9UBG0 1479 aa19.42■□□□□ 0.7
PHF11-206ENST00000465045 WDR62O43379 1518 aa19.36■□□□□ 0.69
PHF11-206ENST00000465045 CUX2O14529 1486 aa19.36■□□□□ 0.69
PHF11-206ENST00000465045 URB2Q14146 1524 aaKnown RBP19.34■□□□□ 0.69
PHF11-206ENST00000465045 DNMBPQ6XZF7 1577 aa19.24■□□□□ 0.67
PHF11-206ENST00000465045 TOPBP1Q92547 1522 aa19.23■□□□□ 0.67
PHF11-206ENST00000465045 CUX1P39880 1505 aa19.17■□□□□ 0.66
PHF11-206ENST00000465045 ABCC8Q09428 1581 aa19.17■□□□□ 0.66
PHF11-206ENST00000465045 SYNJ1O43426 1573 aa19.09■□□□□ 0.65
PHF11-206ENST00000465045 POLA1P09884 1462 aaPredicted RBP19.09■□□□□ 0.65
PHF11-206ENST00000465045 FGD5Q6ZNL6 1462 aa19.08■□□□□ 0.64
PHF11-206ENST00000465045 WRNQ14191 1432 aaPredicted RBP eCLIP19.07■□□□□ 0.64
PHF11-206ENST00000465045 BIVM-ERCC5R4GMW8 1640 aa19.06■□□□□ 0.64
PHF11-206ENST00000465045 TOP2BQ02880 1626 aa19.04■□□□□ 0.64
PHF11-206ENST00000465045 IFT140Q96RY7 1462 aa19.04■□□□□ 0.64
PHF11-206ENST00000465045 TARBP1Q13395 1621 aaKnown RBP19.04■□□□□ 0.64
PHF11-206ENST00000465045 RAD54L2Q9Y4B4 1467 aa19.01■□□□□ 0.63
PHF11-206ENST00000465045 ZNF608Q9ULD9 1512 aaPredicted RBP19■□□□□ 0.63
PHF11-206ENST00000465045 EIF4G3O43432 1585 aaKnown RBP18.97■□□□□ 0.63
PHF11-206ENST00000465045 SOGA1O94964 1423 aa18.96■□□□□ 0.63
PHF11-206ENST00000465045 WDR97A6NE52 1622 aa18.96■□□□□ 0.63
PHF11-206ENST00000465045 AQRO60306 1485 aaKnown RBP eCLIP18.88■□□□□ 0.61
PHF11-206ENST00000465045 ABCA10Q8WWZ4 1543 aa18.86■□□□□ 0.61
PHF11-206ENST00000465045 TDRD9Q8NDG6 1382 aaKnown RBP18.86■□□□□ 0.61
PHF11-206ENST00000465045 ABCA5Q8WWZ7 1642 aa18.83■□□□□ 0.61
PHF11-206ENST00000465045 PBRM1Q86U86 1689 aa18.83■□□□□ 0.6
PHF11-206ENST00000465045 GAPVD1Q14C86 1478 aa18.77■□□□□ 0.6
PHF11-206ENST00000465045 SNAPC4Q5SXM2 1469 aa18.75■□□□□ 0.59
PHF11-206ENST00000465045 GRIN2BQ13224 1484 aa18.74■□□□□ 0.59
PHF11-206ENST00000465045 CHD1O14646 1710 aa18.73■□□□□ 0.59
PHF11-206ENST00000465045 TRIM41Q8WV44 630 aa18.69■□□□□ 0.58
PHF11-206ENST00000465045 MAGI1Q96QZ7 1491 aaPredicted RBP18.68■□□□□ 0.58
PHF11-206ENST00000465045 ADAMTS12P58397 1594 aa18.65■□□□□ 0.58
PHF11-206ENST00000465045 KIF27Q86VH2 1401 aa18.64■□□□□ 0.57
PHF11-206ENST00000465045 ERICH3Q5RHP9 1530 aa18.64■□□□□ 0.57
PHF11-206ENST00000465045 FBLN2P98095 1184 aa18.61■□□□□ 0.57
PHF11-206ENST00000465045 SYNJ2O15056 1496 aa18.6■□□□□ 0.57
PHF11-206ENST00000465045 RUSC2Q8N2Y8 1516 aa18.58■□□□□ 0.56
PHF11-206ENST00000465045 CHIC1Q5VXU3 224 aa18.57■□□□□ 0.56
PHF11-206ENST00000465045 CHMP7Q8WUX9 453 aaPredicted RBP18.55■□□□□ 0.56
PHF11-206ENST00000465045 CUL7Q14999 1698 aa18.54■□□□□ 0.56
PHF11-206ENST00000465045 FHAD1B1AJZ9 1412 aa18.54■□□□□ 0.56
PHF11-206ENST00000465045 OSCARQ8IYS5 282 aa18.53■□□□□ 0.56
PHF11-206ENST00000465045 GRIN2AQ12879 1464 aa18.53■□□□□ 0.56
PHF11-206ENST00000465045 DNAJC5Q9H3Z4 198 aa18.52■□□□□ 0.55
PHF11-206ENST00000465045 IGF1RP08069 1367 aa18.51■□□□□ 0.55
PHF11-206ENST00000465045 CEP170Q5SW79 1584 aa18.46■□□□□ 0.55
PHF11-206ENST00000465045 CLASP1Q7Z460 1538 aa18.45■□□□□ 0.54
PHF11-206ENST00000465045 CARMIL1Q5VZK9 1371 aa18.43■□□□□ 0.54
PHF11-206ENST00000465045 NUP160Q12769 1436 aa18.41■□□□□ 0.54
PHF11-206ENST00000465045 FAM9AQ8IZU1 332 aaPredicted RBP18.38■□□□□ 0.53
PHF11-206ENST00000465045 EEA1Q15075 1411 aa18.36■□□□□ 0.53
PHF11-206ENST00000465045 RAPGEF2Q9Y4G8 1499 aa18.35■□□□□ 0.53
PHF11-206ENST00000465045 RIMBP3CA6NJZ7 1639 aa18.35■□□□□ 0.53
PHF11-206ENST00000465045 RIMBP3BA6NNM3 1639 aa18.35■□□□□ 0.53
PHF11-206ENST00000465045 RIMBP3Q9UFD9 1639 aa18.35■□□□□ 0.53
PHF11-206ENST00000465045 ARHGEF11O15085 1522 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms